| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is yfaO [C]
Identifier: 94984218
GI number: 94984218
Start: 103120
End: 103530
Strand: Reverse
Name: yfaO [C]
Synonym: Dgeo_0110
Alternate gene names: 94984218
Gene position: 103530-103120 (Counterclockwise)
Preceding gene: 94984219
Following gene: 94984217
Centisome position: 4.2
GC content: 64.72
Gene sequence:
>411_bases ATGAACAGGCCAGTTGTCTGCGTAGGAGCACTCGTATGGGGACCGGACGGGCAGGTCTTGCTGGTCCGCACGACGAAGTG GCGTGGGCTGTGGGGCGTGCCGGGCGGCAAGGTGGACTGGGGCGAGACGCTCGCAGAGGCGGTGCAGCGCGAGTTCCGCG AGGAGACAGGCCTCACGCTGCGGGACATCCGCTATGCACAGACGCAAGAAGCAGTCCTCAGTGAGGAGTTCCACAAGCCC GCCCACATGGTGCTGGTGGACTTCTTCGCCCGAACAGACACGACTGCGATCACCCCGAACGAGGAAATCGAGGCATGGGT CTGGGTGCCGCTGGCGGAGGCGGCAGGCTATCCGCTGAATACCGTCACCCGCATGCTGGTCGAACTGGCCCAGACGTGGG AGGAAGCATGA
Upstream 100 bases:
>100_bases TCGGGGCGTGCGGTAAGGGATCAGCCCGCTGTGAAAAGACAAGCTTTGCCCACCGGCCACGCATCACACCTCACGGACCG CCCGGCGTACCCTGCTGCAC
Downstream 100 bases:
>100_bases GGGGCACCGCCCTGGTCACCGGCGCGGCGCGCGGGATCGGGCGGGCCCTCGCGCTGGCCCTGGCCGCCGAAGGGTACGCC CTCGCCGTGCATTACCGGGG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: DGTP Pyrophosphohydrolase/Dihydroneopterin Aldolase; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MNRPVVCVGALVWGPDGQVLLVRTTKWRGLWGVPGGKVDWGETLAEAVQREFREETGLTLRDIRYAQTQEAVLSEEFHKP AHMVLVDFFARTDTTAITPNEEIEAWVWVPLAEAAGYPLNTVTRMLVELAQTWEEA
Sequences:
>Translated_136_residues MNRPVVCVGALVWGPDGQVLLVRTTKWRGLWGVPGGKVDWGETLAEAVQREFREETGLTLRDIRYAQTQEAVLSEEFHKP AHMVLVDFFARTDTTAITPNEEIEAWVWVPLAEAAGYPLNTVTRMLVELAQTWEEA >Mature_136_residues MNRPVVCVGALVWGPDGQVLLVRTTKWRGLWGVPGGKVDWGETLAEAVQREFREETGLTLRDIRYAQTQEAVLSEEFHKP AHMVLVDFFARTDTTAITPNEEIEAWVWVPLAEAAGYPLNTVTRMLVELAQTWEEA
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.-.- [C]
Molecular weight: Translated: 15337; Mature: 15337
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPVVCVGALVWGPDGQVLLVRTTKWRGLWGVPGGKVDWGETLAEAVQREFREETGLTL CCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEE RDIRYAQTQEAVLSEEFHKPAHMVLVDFFARTDTTAITPNEEIEAWVWVPLAEAAGYPLN EHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCEEEEEEEEHHHCCCCHH TVTRMLVELAQTWEEA HHHHHHHHHHHHHCCC >Mature Secondary Structure MNRPVVCVGALVWGPDGQVLLVRTTKWRGLWGVPGGKVDWGETLAEAVQREFREETGLTL CCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEE RDIRYAQTQEAVLSEEFHKPAHMVLVDFFARTDTTAITPNEEIEAWVWVPLAEAAGYPLN EHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCEEEEEEEEHHHCCCCHH TVTRMLVELAQTWEEA HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA