Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is yfaO [C]

Identifier: 94984218

GI number: 94984218

Start: 103120

End: 103530

Strand: Reverse

Name: yfaO [C]

Synonym: Dgeo_0110

Alternate gene names: 94984218

Gene position: 103530-103120 (Counterclockwise)

Preceding gene: 94984219

Following gene: 94984217

Centisome position: 4.2

GC content: 64.72

Gene sequence:

>411_bases
ATGAACAGGCCAGTTGTCTGCGTAGGAGCACTCGTATGGGGACCGGACGGGCAGGTCTTGCTGGTCCGCACGACGAAGTG
GCGTGGGCTGTGGGGCGTGCCGGGCGGCAAGGTGGACTGGGGCGAGACGCTCGCAGAGGCGGTGCAGCGCGAGTTCCGCG
AGGAGACAGGCCTCACGCTGCGGGACATCCGCTATGCACAGACGCAAGAAGCAGTCCTCAGTGAGGAGTTCCACAAGCCC
GCCCACATGGTGCTGGTGGACTTCTTCGCCCGAACAGACACGACTGCGATCACCCCGAACGAGGAAATCGAGGCATGGGT
CTGGGTGCCGCTGGCGGAGGCGGCAGGCTATCCGCTGAATACCGTCACCCGCATGCTGGTCGAACTGGCCCAGACGTGGG
AGGAAGCATGA

Upstream 100 bases:

>100_bases
TCGGGGCGTGCGGTAAGGGATCAGCCCGCTGTGAAAAGACAAGCTTTGCCCACCGGCCACGCATCACACCTCACGGACCG
CCCGGCGTACCCTGCTGCAC

Downstream 100 bases:

>100_bases
GGGGCACCGCCCTGGTCACCGGCGCGGCGCGCGGGATCGGGCGGGCCCTCGCGCTGGCCCTGGCCGCCGAAGGGTACGCC
CTCGCCGTGCATTACCGGGG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: DGTP Pyrophosphohydrolase/Dihydroneopterin Aldolase; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNRPVVCVGALVWGPDGQVLLVRTTKWRGLWGVPGGKVDWGETLAEAVQREFREETGLTLRDIRYAQTQEAVLSEEFHKP
AHMVLVDFFARTDTTAITPNEEIEAWVWVPLAEAAGYPLNTVTRMLVELAQTWEEA

Sequences:

>Translated_136_residues
MNRPVVCVGALVWGPDGQVLLVRTTKWRGLWGVPGGKVDWGETLAEAVQREFREETGLTLRDIRYAQTQEAVLSEEFHKP
AHMVLVDFFARTDTTAITPNEEIEAWVWVPLAEAAGYPLNTVTRMLVELAQTWEEA
>Mature_136_residues
MNRPVVCVGALVWGPDGQVLLVRTTKWRGLWGVPGGKVDWGETLAEAVQREFREETGLTLRDIRYAQTQEAVLSEEFHKP
AHMVLVDFFARTDTTAITPNEEIEAWVWVPLAEAAGYPLNTVTRMLVELAQTWEEA

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.-.- [C]

Molecular weight: Translated: 15337; Mature: 15337

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPVVCVGALVWGPDGQVLLVRTTKWRGLWGVPGGKVDWGETLAEAVQREFREETGLTL
CCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEE
RDIRYAQTQEAVLSEEFHKPAHMVLVDFFARTDTTAITPNEEIEAWVWVPLAEAAGYPLN
EHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCEEEEEEEEHHHCCCCHH
TVTRMLVELAQTWEEA
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRPVVCVGALVWGPDGQVLLVRTTKWRGLWGVPGGKVDWGETLAEAVQREFREETGLTL
CCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEE
RDIRYAQTQEAVLSEEFHKPAHMVLVDFFARTDTTAITPNEEIEAWVWVPLAEAAGYPLN
EHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCEEEEEEEEHHHCCCCHH
TVTRMLVELAQTWEEA
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA