| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984179
Identifier: 94984179
GI number: 94984179
Start: 68257
End: 69522
Strand: Reverse
Name: 94984179
Synonym: Dgeo_0071
Alternate gene names: NA
Gene position: 69522-68257 (Counterclockwise)
Preceding gene: 94984180
Following gene: 94984178
Centisome position: 2.82
GC content: 68.88
Gene sequence:
>1266_bases ATGTCCCCTTCCTCCTTTGATGACAAGCTCGCTCGCTATGCCGAACTCCTCGTCCGGATCGGCGTGAATCTGCCGGAAGG CGGGAAGGTGCGGATCCATGCCCCCATCGAGGCCGCGCCGCTGGTGCGGCTGGTGGCCCGTGCCGCGTACCGGGCAGGCG CCGCCGACGTGCGCGTGGGGTACCGCGACGATCACCTCGATCGAGCGCTCTACGAGGACGGCAGCGACGCGGCGGTGGAC TTTCTGCCGGAATGGCTCGCGCAGGAGCAGGCGGCGATGGTGGCGGACGGCTACGCCTTTATCTCCATCGTGGGGGAAGA CCCCTCGCTGCTGGCGGGCGTGAACCCGGACCGGGTCGCGCGGCGCAGCAAGGCCCTTGCCGCGGCCCGGCGGGAGGTCA GCGAGGCCATCAGCGGTATGAAGGTGAACTGGACTGTCGCCGGGATGGCGACCCCAGCCTGGGCGCGCCGCGTCTTTCCC CAGCTGCCGGAAGAGGCAGCAGTGGCCCGGCTGTGGGACGACATCTTCAAAGTGACCCGCGCCGACCAGCCCGACCCGGT GGCGGCTTGGGACACGCACCTTTCCAGGCTGGAGCACCTCACCGAGTATCTGAATGAGAAACAGTACACGGCCCTTCACC TCCGCAGCGGCCTGGGCACCGACCTCACGGTGGGGCTGGCCGAAGGGCATATCTGGCAGGGCGGCGCGGAAACGGCGAAA AACGGCATCCGGGCCGTGCCCAACCTCCCCACCGACGAGGTCTTTACCGCCCCGCACCGTGACCGGGTGGACGGCGTGGC GGTGGCGAGCAAGCCGCTGAGCGTACGCGGACAACTCGTCGAGGGCATCCGTGTGCGTTTCGAAGGCGGAAAGGCCGTCG AGGTTCGCGCGGAGCAGGGCGAGGAGACGCTGCGGCAACTGCTGGCGACGGACGAGGGCGCCGCCCACCTGGGTGAGATC GCGCTGGTGCCCGCCTCGGCCCCCGTCGCGCAGACCGGGACGCTCTTCCTGAACACCCTCTTCGACGAGAATGCCGCCTC CCACATCGCCCTGGGGCGCTGCTACCCCACCAATGTGCAGAACGGCGAGAACCCAGAAGCCCTGCGGGCGGCGGGCGGCA ACGACTCGCTCATCCACGTGGACTGGATGATCGGCACCCCCGATATGGATGTGGACGGCATCACGGCGGACGGCAAATGC GAAGCGCTGATGCGCGGGGGCGAATGGGTGGTGGGCGAGCGTTCAGCGGCTGAGGCCAAGGCTTAA
Upstream 100 bases:
>100_bases ACTCACCCACGAGCAGGACGTGTCCTGCGGGGGATGAGGGGCCTCACATCCCGCAGATGGCGGACGACACTGTCCCGCCG CCCGCCGTAGAGTGACGCCT
Downstream 100 bases:
>100_bases GCCTTCCCGTCGGCCGGCAGACCGCTCGCCCACCGGCCCGACCGGTACAATGCCGCCATGACCAGCCAGGACACCTACCA GGCCGACGGCTTCACGCCCA
Product: peptidase M29, aminopeptidase II
Products: NA
Alternate protein names: AP-T; Heat-stable aminopeptidase [H]
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSPSSFDDKLARYAELLVRIGVNLPEGGKVRIHAPIEAAPLVRLVARAAYRAGAADVRVGYRDDHLDRALYEDGSDAAVD FLPEWLAQEQAAMVADGYAFISIVGEDPSLLAGVNPDRVARRSKALAAARREVSEAISGMKVNWTVAGMATPAWARRVFP QLPEEAAVARLWDDIFKVTRADQPDPVAAWDTHLSRLEHLTEYLNEKQYTALHLRSGLGTDLTVGLAEGHIWQGGAETAK NGIRAVPNLPTDEVFTAPHRDRVDGVAVASKPLSVRGQLVEGIRVRFEGGKAVEVRAEQGEETLRQLLATDEGAAHLGEI ALVPASAPVAQTGTLFLNTLFDENAASHIALGRCYPTNVQNGENPEALRAAGGNDSLIHVDWMIGTPDMDVDGITADGKC EALMRGGEWVVGERSAAEAKA
Sequences:
>Translated_421_residues MSPSSFDDKLARYAELLVRIGVNLPEGGKVRIHAPIEAAPLVRLVARAAYRAGAADVRVGYRDDHLDRALYEDGSDAAVD FLPEWLAQEQAAMVADGYAFISIVGEDPSLLAGVNPDRVARRSKALAAARREVSEAISGMKVNWTVAGMATPAWARRVFP QLPEEAAVARLWDDIFKVTRADQPDPVAAWDTHLSRLEHLTEYLNEKQYTALHLRSGLGTDLTVGLAEGHIWQGGAETAK NGIRAVPNLPTDEVFTAPHRDRVDGVAVASKPLSVRGQLVEGIRVRFEGGKAVEVRAEQGEETLRQLLATDEGAAHLGEI ALVPASAPVAQTGTLFLNTLFDENAASHIALGRCYPTNVQNGENPEALRAAGGNDSLIHVDWMIGTPDMDVDGITADGKC EALMRGGEWVVGERSAAEAKA >Mature_420_residues SPSSFDDKLARYAELLVRIGVNLPEGGKVRIHAPIEAAPLVRLVARAAYRAGAADVRVGYRDDHLDRALYEDGSDAAVDF LPEWLAQEQAAMVADGYAFISIVGEDPSLLAGVNPDRVARRSKALAAARREVSEAISGMKVNWTVAGMATPAWARRVFPQ LPEEAAVARLWDDIFKVTRADQPDPVAAWDTHLSRLEHLTEYLNEKQYTALHLRSGLGTDLTVGLAEGHIWQGGAETAKN GIRAVPNLPTDEVFTAPHRDRVDGVAVASKPLSVRGQLVEGIRVRFEGGKAVEVRAEQGEETLRQLLATDEGAAHLGEIA LVPASAPVAQTGTLFLNTLFDENAASHIALGRCYPTNVQNGENPEALRAAGGNDSLIHVDWMIGTPDMDVDGITADGKCE ALMRGGEWVVGERSAAEAKA
Specific function: Metal-dependent exopeptidase [H]
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M29 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000787 [H]
Pfam domain/function: PF02073 Peptidase_M29 [H]
EC number: NA
Molecular weight: Translated: 45240; Mature: 45109
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSSFDDKLARYAELLVRIGVNLPEGGKVRIHAPIEAAPLVRLVARAAYRAGAADVRVG CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEC YRDDHLDRALYEDGSDAAVDFLPEWLAQEQAAMVADGYAFISIVGEDPSLLAGVNPDRVA CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCHHHHH RRSKALAAARREVSEAISGMKVNWTVAGMATPAWARRVFPQLPEEAAVARLWDDIFKVTR HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHC ADQPDPVAAWDTHLSRLEHLTEYLNEKQYTALHLRSGLGTDLTVGLAEGHIWQGGAETAK CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCEECCCHHHHH NGIRAVPNLPTDEVFTAPHRDRVDGVAVASKPLSVRGQLVEGIRVRFEGGKAVEVRAEQG CCCEECCCCCCCCEECCCCCCCCCCEEEECCCCHHHHHHCCCEEEEECCCCEEEEEHHCC EETLRQLLATDEGAAHLGEIALVPASAPVAQTGTLFLNTLFDENAASHIALGRCYPTNVQ HHHHHHHHHCCCCCHHHCCEEEECCCCCCCCCCHHHEEHHHCCCCCCCEEECCEECCCCC NGENPEALRAAGGNDSLIHVDWMIGTPDMDVDGITADGKCEALMRGGEWVVGERSAAEAK CCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCEEECCCCHHCCC A C >Mature Secondary Structure SPSSFDDKLARYAELLVRIGVNLPEGGKVRIHAPIEAAPLVRLVARAAYRAGAADVRVG CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEC YRDDHLDRALYEDGSDAAVDFLPEWLAQEQAAMVADGYAFISIVGEDPSLLAGVNPDRVA CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCHHHHH RRSKALAAARREVSEAISGMKVNWTVAGMATPAWARRVFPQLPEEAAVARLWDDIFKVTR HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHC ADQPDPVAAWDTHLSRLEHLTEYLNEKQYTALHLRSGLGTDLTVGLAEGHIWQGGAETAK CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCEECCCHHHHH NGIRAVPNLPTDEVFTAPHRDRVDGVAVASKPLSVRGQLVEGIRVRFEGGKAVEVRAEQG CCCEECCCCCCCCEECCCCCCCCCCEEEECCCCHHHHHHCCCEEEEECCCCEEEEEHHCC EETLRQLLATDEGAAHLGEIALVPASAPVAQTGTLFLNTLFDENAASHIALGRCYPTNVQ HHHHHHHHHCCCCCHHHCCEEEECCCCCCCCCCHHHEEHHHCCCCCCCEEECCEECCCCC NGENPEALRAAGGNDSLIHVDWMIGTPDMDVDGITADGKCEALMRGGEWVVGERSAAEAK CCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCEEECCCCHHCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9362117 [H]