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The map label for this gene is yhcF [H]

Identifier: 94994537

GI number: 94994537

Start: 1086714

End: 1087175

Strand: Direct

Name: yhcF [H]

Synonym: MGAS10750_Spy1141

Alternate gene names: 94994537

Gene position: 1086714-1087175 (Clockwise)

Preceding gene: 94994526

Following gene: 94994538

Centisome position: 56.1

GC content: 35.93

Gene sequence:

>462_bases
GTGAAAAATGGCATAAAACTTGACATTCCCCTTTTTTTTCTGTACCATTTAATTAGTACAAATATCTATATTACTCAGAA
AGGAGACCACATGTCTTGGAAATTTGATGAAAAATCTCCTATTTATGCGCAGATAGCACAACATGTCATGATGCAAATTA
TTAGCCAAGAAATCAAGAGTGGTGATCAACTTCCAACTGTTCGTGAATATGCAGAAATCGCAGGTGTCAATCCTAACACC
ATGCAACGAGCGTTTACAGAACTTGAACGGGAAGGAATGGTTTATTCGCAACGTACTGCTGGCCGTTTTGTAACTGACGA
TCAAAAATTAATTGCTCGTAAAAGACGAGAGTTAGCAATTAGTGAATTAGAATCATTTATCACCAATATGACAAAAATGG
GATTTAATCACACTGAGATTATCCCTGTTTTGACGAGCTTTTTAAAGGAGGATTCACAATAA

Upstream 100 bases:

>100_bases
AAACATAAGTTCCTCCTTTGGTTATCTTGTTCCCTATTATACTATGAAAAAGGTTTTCTTGCTTCAATTTTCTCTCTAAT
CTACGTCTACTTCTCAAAGA

Downstream 100 bases:

>100_bases
TGGCACACCTATTGCAACTACATCATGTTTCAAAATCTTACCGTGAAAAAAAAGCTATTGATGACTTAACCATTACTATC
CCGAACGGTAAAATTATCGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKNGIKLDIPLFFLYHLISTNIYITQKGDHMSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNT
MQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFNHTEIIPVLTSFLKEDSQ

Sequences:

>Translated_153_residues
MKNGIKLDIPLFFLYHLISTNIYITQKGDHMSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNT
MQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFNHTEIIPVLTSFLKEDSQ
>Mature_153_residues
MKNGIKLDIPLFFLYHLISTNIYITQKGDHMSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNT
MQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFNHTEIIPVLTSFLKEDSQ

Specific function: Unknown

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 17735; Mature: 17735

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNGIKLDIPLFFLYHLISTNIYITQKGDHMSWKFDEKSPIYAQIAQHVMMQIISQEIKS
CCCCCEECHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHC
GDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAI
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHH
SELESFITNMTKMGFNHTEIIPVLTSFLKEDSQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNGIKLDIPLFFLYHLISTNIYITQKGDHMSWKFDEKSPIYAQIAQHVMMQIISQEIKS
CCCCCEECHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHC
GDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAI
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHH
SELESFITNMTKMGFNHTEIIPVLTSFLKEDSQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]