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The map label for this gene is ydcI [H]

Identifier: 94993898

GI number: 94993898

Start: 485096

End: 487249

Strand: Direct

Name: ydcI [H]

Synonym: MGAS10750_Spy0502

Alternate gene names: 94993898

Gene position: 485096-487249 (Clockwise)

Preceding gene: 94993897

Following gene: 94993899

Centisome position: 25.04

GC content: 42.99

Gene sequence:

>2154_bases
TTGTGTTATAATAGCAATATTATGGAAAATAACAATAATCACAACATTGCAGAGGCTTTGTCAGTTAGTCTCCATCAAAT
TGAACAGGTGCTTGCCCTAACAGCACAAGGCAATACCATTCCCTTTATTGCACGTTACCGTAAAGAAGTAACAGGAAATC
TAGATGAAGTGGTGATTAAGTCCATTATTGATATGGATAAGTCTCTCACTACCCTGAATGAGCGCAAAGCAACCATTCTC
GCTAAAATTGAGGAACAGGGAAAACTGACAGATCAGTTACGAACGAGTATTGAAGCAACCGAGAAACTCGCTGATTTGGA
AGAGTTGTACCTGCCTTATAAGGAAAAACGCCGTACAAAAGCGACGATTGCGCGTGAAGCAGGCTTGTTCCCATTAGCAC
GTTTGATTTTACAAAATGCGCAAAACCTTGAAACAGCAGCAGAACCCTTTGTCACAGAAGGATTTGCCAGCCCACAAGAA
GCTCTAGCAGGAGCTGTGGACATCCTTGTGGAGGCCATGTCAGAAGATGCTAAATTACGCTCTTGGACCTACAATGAGAT
TTGGCAGTACAGCCGCTTAGTATCAACGCTTAAAGATGAGCAGTTGGATGAGAAAAAGGTTTTCCAAATCTATTACGATT
TTTCTGACCAAGTGTCTAACATGCAAGGATATCGTACTTTAGCCCTTAACCGTGGCGAAAAGTTAGGCATCTTAAAAGTG
TCTTTTGAGCATAACTTGGAGAAAATGCAACGCTTTTTCAGTGTGCGGTTCAAAGAAACCAACCCTTATATTGAAGAGGT
CATCAATCAGACCATCAAAAAGAAAATTGTTCCAGCTATGGAAAGACGGGTTCGTTCAGAACTCAGTGATGCCGCAGAAG
ATGGGGCTATCCACCTCTTTTCTGAAAATCTCCGTCATCTTTTGTTAGTGTCTCCTTTAAAAGGGAAAATGGTTCTTGGA
TTTGACCCTGCCTTTCGAACAGGTGCAAAATTGGCTATCGTTGATCAGACTGGAAAATTGTTGACTACTCAGGTTATTTA
TCCCGTAGCACCAGCTAGCCAAACGAAGATTCAAGCAGCTAAAGAAACACTGACTCAGCTCATTGAGACTTACCAGATTG
ATATTATTGCCATTGGAAACGGAACAGCCAGTCGGGAAAGTGAAGCCTTTGTAGCAGACGTTTTGAAAGATTTCCCAAAT
ACGTCCTATGTCATCGTTAACGAAAGCGGAGCTTCTGTTTATTCAGCGTCAGAGTTAGCCCGTCATGAGTTTCCAGACCT
CACAGTGGAGAAGCGCTCTGCTATTTCTATTGCTCGTCGCTTGCAAGACCCACTCGCAGAATTGGTTAAAATTGATCCTA
AATCTATTGGCGTCGGTCAGTACCAGCACGATGTGAGTCAGAAAAAGTTGAGTGAGAATCTTGGTTTTGTTGTTGATACT
GTGGTTAACCAAGTCGGTGTTAATGTGAACACGGCTAGTCCATCTTTATTAGCACATGTGTCAGGTTTGAACAAAACGAT
TTCAGAAAATATTGTCAAATACCGCGAAGAAAATGGAGCACTGACATCACGCGCTGACATCAAAAAAGTGCCGCGTTTAG
GAGCCAAGGCGTTTGAGCAAGCAGCAGGTTTTCTCAGAATTCCAGGAGCCAAAAATATTTTAGACAACACAGGAGTTCAC
CCCGAGTCCTACCCAGCAGTCAAAGAACTCTTTAAGGTACTTGGTATTCAGGACTTGGACGACGCTGCCAAGGCAACTTT
AGCAGCAGTTCAAGTTCCCCAAATGGCAGAAACATTGGCTATTGGGCAGGAAACCCTTAAAGATATCATTGCTGATCTCC
TTAAACCGGGTCGTGACCTTCGTGATGACTTTGAAGCACCAATCTTACGTCAAGATATCCTTGATTTGAAAGATTTGGAA
ATTGGCCAGAAGCTTGAAGGAACTGTGAGAAACGTCGTTGACTTTGGTGCTTTTGTAGACATTGGTGTTCATGAAGATGG
GCTTATTCACATTTCTGAAATGAGCAAAACCTTTGTCAACCACCCTAGTCAGGTTGTTTCAGTGGGTGACTTGGTAACTG
TTTGGGTCTCTAAGATTGACTTGGACCGCCACAAGGTCAATCTCAGCCTATTGCCACCGCGTGACACTCACTAA

Upstream 100 bases:

>100_bases
AGGGTTTCGTCAGTTATTTACTAAAAGTAGCTTTTTTTGATTCTTTACGCAACTTTATATTAGGACAATGTTTCGCTATC
ATTTTTTGCATTAACATGGT

Downstream 100 bases:

>100_bases
TTATGTCCAAGAAGTTTCCCTGGCTGATTTTGGCAAACCATTTCACCACAAGGCTTATTGGAACAAGCGCCTAAAAACAA
CTGGCGGTCGCTTTTTTCCA

Product: transcription accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 717

Protein sequence:

>717_residues
MCYNSNIMENNNNHNIAEALSVSLHQIEQVLALTAQGNTIPFIARYRKEVTGNLDEVVIKSIIDMDKSLTTLNERKATIL
AKIEEQGKLTDQLRTSIEATEKLADLEELYLPYKEKRRTKATIAREAGLFPLARLILQNAQNLETAAEPFVTEGFASPQE
ALAGAVDILVEAMSEDAKLRSWTYNEIWQYSRLVSTLKDEQLDEKKVFQIYYDFSDQVSNMQGYRTLALNRGEKLGILKV
SFEHNLEKMQRFFSVRFKETNPYIEEVINQTIKKKIVPAMERRVRSELSDAAEDGAIHLFSENLRHLLLVSPLKGKMVLG
FDPAFRTGAKLAIVDQTGKLLTTQVIYPVAPASQTKIQAAKETLTQLIETYQIDIIAIGNGTASRESEAFVADVLKDFPN
TSYVIVNESGASVYSASELARHEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSENLGFVVDT
VVNQVGVNVNTASPSLLAHVSGLNKTISENIVKYREENGALTSRADIKKVPRLGAKAFEQAAGFLRIPGAKNILDNTGVH
PESYPAVKELFKVLGIQDLDDAAKATLAAVQVPQMAETLAIGQETLKDIIADLLKPGRDLRDDFEAPILRQDILDLKDLE
IGQKLEGTVRNVVDFGAFVDIGVHEDGLIHISEMSKTFVNHPSQVVSVGDLVTVWVSKIDLDRHKVNLSLLPPRDTH

Sequences:

>Translated_717_residues
MCYNSNIMENNNNHNIAEALSVSLHQIEQVLALTAQGNTIPFIARYRKEVTGNLDEVVIKSIIDMDKSLTTLNERKATIL
AKIEEQGKLTDQLRTSIEATEKLADLEELYLPYKEKRRTKATIAREAGLFPLARLILQNAQNLETAAEPFVTEGFASPQE
ALAGAVDILVEAMSEDAKLRSWTYNEIWQYSRLVSTLKDEQLDEKKVFQIYYDFSDQVSNMQGYRTLALNRGEKLGILKV
SFEHNLEKMQRFFSVRFKETNPYIEEVINQTIKKKIVPAMERRVRSELSDAAEDGAIHLFSENLRHLLLVSPLKGKMVLG
FDPAFRTGAKLAIVDQTGKLLTTQVIYPVAPASQTKIQAAKETLTQLIETYQIDIIAIGNGTASRESEAFVADVLKDFPN
TSYVIVNESGASVYSASELARHEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSENLGFVVDT
VVNQVGVNVNTASPSLLAHVSGLNKTISENIVKYREENGALTSRADIKKVPRLGAKAFEQAAGFLRIPGAKNILDNTGVH
PESYPAVKELFKVLGIQDLDDAAKATLAAVQVPQMAETLAIGQETLKDIIADLLKPGRDLRDDFEAPILRQDILDLKDLE
IGQKLEGTVRNVVDFGAFVDIGVHEDGLIHISEMSKTFVNHPSQVVSVGDLVTVWVSKIDLDRHKVNLSLLPPRDTH
>Mature_717_residues
MCYNSNIMENNNNHNIAEALSVSLHQIEQVLALTAQGNTIPFIARYRKEVTGNLDEVVIKSIIDMDKSLTTLNERKATIL
AKIEEQGKLTDQLRTSIEATEKLADLEELYLPYKEKRRTKATIAREAGLFPLARLILQNAQNLETAAEPFVTEGFASPQE
ALAGAVDILVEAMSEDAKLRSWTYNEIWQYSRLVSTLKDEQLDEKKVFQIYYDFSDQVSNMQGYRTLALNRGEKLGILKV
SFEHNLEKMQRFFSVRFKETNPYIEEVINQTIKKKIVPAMERRVRSELSDAAEDGAIHLFSENLRHLLLVSPLKGKMVLG
FDPAFRTGAKLAIVDQTGKLLTTQVIYPVAPASQTKIQAAKETLTQLIETYQIDIIAIGNGTASRESEAFVADVLKDFPN
TSYVIVNESGASVYSASELARHEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSENLGFVVDT
VVNQVGVNVNTASPSLLAHVSGLNKTISENIVKYREENGALTSRADIKKVPRLGAKAFEQAAGFLRIPGAKNILDNTGVH
PESYPAVKELFKVLGIQDLDDAAKATLAAVQVPQMAETLAIGQETLKDIIADLLKPGRDLRDDFEAPILRQDILDLKDLE
IGQKLEGTVRNVVDFGAFVDIGVHEDGLIHISEMSKTFVNHPSQVVSVGDLVTVWVSKIDLDRHKVNLSLLPPRDTH

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=766, Percent_Identity=33.6814621409922, Blast_Score=373, Evalue=1e-103,
Organism=Homo sapiens, GI27597090, Length=632, Percent_Identity=22.1518987341772, Blast_Score=77, Evalue=6e-14,
Organism=Escherichia coli, GI87082262, Length=725, Percent_Identity=43.7241379310345, Blast_Score=546, Evalue=1e-156,
Organism=Escherichia coli, GI1787140, Length=75, Percent_Identity=48, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17511129, Length=743, Percent_Identity=32.1668909825034, Blast_Score=261, Evalue=6e-70,
Organism=Caenorhabditis elegans, GI17552892, Length=348, Percent_Identity=27.2988505747126, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI62484314, Length=768, Percent_Identity=33.8541666666667, Blast_Score=382, Evalue=1e-106,
Organism=Drosophila melanogaster, GI24640080, Length=416, Percent_Identity=22.5961538461538, Blast_Score=80, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 79677; Mature: 79677

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50126 S1 ; PS00283 SOYBEAN_KUNITZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCYNSNIMENNNNHNIAEALSVSLHQIEQVLALTAQGNTIPFIARYRKEVTGNLDEVVIK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHH
SIIDMDKSLTTLNERKATILAKIEEQGKLTDQLRTSIEATEKLADLEELYLPYKEKRRTK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ATIAREAGLFPLARLILQNAQNLETAAEPFVTEGFASPQEALAGAVDILVEAMSEDAKLR
HHHHHHCCHHHHHHHHHHCCHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
SWTYNEIWQYSRLVSTLKDEQLDEKKVFQIYYDFSDQVSNMQGYRTLALNRGEKLGILKV
CCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEECHHHHHHCCCCCEEEEECCCCEEEEEEE
SFEHNLEKMQRFFSVRFKETNPYIEEVINQTIKKKIVPAMERRVRSELSDAAEDGAIHLF
EHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
SENLRHLLLVSPLKGKMVLGFDPAFRTGAKLAIVDQTGKLLTTQVIYPVAPASQTKIQAA
HHCCCCEEEECCCCCCEEEECCHHHHCCCEEEEEECCCCEEEHHEEEECCCCCHHHHHHH
KETLTQLIETYQIDIIAIGNGTASRESEAFVADVLKDFPNTSYVIVNESGASVYSASELA
HHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
RHEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSENLGFVVDT
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
VVNQVGVNVNTASPSLLAHVSGLNKTISENIVKYREENGALTSRADIKKVPRLGAKAFEQ
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHH
AAGFLRIPGAKNILDNTGVHPESYPAVKELFKVLGIQDLDDAAKATLAAVQVPQMAETLA
CCCEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IGQETLKDIIADLLKPGRDLRDDFEAPILRQDILDLKDLEIGQKLEGTVRNVVDFGAFVD
HHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHCHHHCCCCHHHHHHHHHHHHHCCEEE
IGVHEDGLIHISEMSKTFVNHPSQVVSVGDLVTVWVSKIDLDRHKVNLSLLPPRDTH
ECCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCC
>Mature Secondary Structure
MCYNSNIMENNNNHNIAEALSVSLHQIEQVLALTAQGNTIPFIARYRKEVTGNLDEVVIK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHH
SIIDMDKSLTTLNERKATILAKIEEQGKLTDQLRTSIEATEKLADLEELYLPYKEKRRTK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ATIAREAGLFPLARLILQNAQNLETAAEPFVTEGFASPQEALAGAVDILVEAMSEDAKLR
HHHHHHCCHHHHHHHHHHCCHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
SWTYNEIWQYSRLVSTLKDEQLDEKKVFQIYYDFSDQVSNMQGYRTLALNRGEKLGILKV
CCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEECHHHHHHCCCCCEEEEECCCCEEEEEEE
SFEHNLEKMQRFFSVRFKETNPYIEEVINQTIKKKIVPAMERRVRSELSDAAEDGAIHLF
EHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
SENLRHLLLVSPLKGKMVLGFDPAFRTGAKLAIVDQTGKLLTTQVIYPVAPASQTKIQAA
HHCCCCEEEECCCCCCEEEECCHHHHCCCEEEEEECCCCEEEHHEEEECCCCCHHHHHHH
KETLTQLIETYQIDIIAIGNGTASRESEAFVADVLKDFPNTSYVIVNESGASVYSASELA
HHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
RHEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSENLGFVVDT
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
VVNQVGVNVNTASPSLLAHVSGLNKTISENIVKYREENGALTSRADIKKVPRLGAKAFEQ
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHH
AAGFLRIPGAKNILDNTGVHPESYPAVKELFKVLGIQDLDDAAKATLAAVQVPQMAETLA
CCCEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IGQETLKDIIADLLKPGRDLRDDFEAPILRQDILDLKDLEIGQKLEGTVRNVVDFGAFVD
HHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHCHHHCCCCHHHHHHHHHHHHHCCEEE
IGVHEDGLIHISEMSKTFVNHPSQVVSVGDLVTVWVSKIDLDRHKVNLSLLPPRDTH
ECCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]