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The map label for this gene is ycjP [C]

Identifier: 94972161

GI number: 94972161

Start: 334522

End: 335361

Strand: Direct

Name: ycjP [C]

Synonym: Dgeo_2694

Alternate gene names: 94972161

Gene position: 334522-335361 (Clockwise)

Preceding gene: 94972162

Following gene: 94972160

Centisome position: 58.27

GC content: 61.07

Gene sequence:

>840_bases
ATGACCCTGGCCCGCCGCTCCACTCTCCCAGGCCGCACCCTGCTCCTCCTTGCCGCCCTGGTGTGGCTGCTCGTCACGAC
CCTGCCGTTCGTGTTTGTCTTCCTGACCAGCGTGAAGAGTCAGGCGGAGATCTACTCGGCCCCGGTGTGGGCACTGCCGA
AGACCTTCGACTTCAGCAACTACGTCACGATTCTGCGCGGTTCCTTTTTCATCTATCTGCGCAACAGCGTGTTTGTTGTG
GTGGTGTCCATCGCCCTGACGCTGTTGCTGAGCAGCATGGCCGCCTTTGCCTTCGCCCGGCTCAAGTTCCGCCTCAACGG
GCTGCTCTTCAGCCTGGTTGTCGCCGGTCTGATCGTGCCCGTCCACGTTACCCTCATTCCCATCTACCTGATGACTCGCG
CGCTGCATCTCTACGACACGCCCGTCGCACTCATCGGACCGTACGTCGCCTTCAGCCTGCCCATCAGCATCTTTATCCTC
ACCGAGTTCATGCGGCAGATTCCGCGTGAGCTGGAGGAGTCAGCACAGATCGATGGGGCGGGGCCGATCACGACTTTCAT
TCGCATCTTCCTGCCACTGTGCACGCCGGGCCTCGCCACGGTCGCCATCTACAACGGCATCAACATGTGGAACGAGTTCA
TCTTCGCCTACGTGCTGACCTCCAATCCCCAGAGCCGCACCCTGCCCCTTGCCATCTGGGACTTCCAAGGGCAGTACAGC
GCCAACATTCCCGCCATCCTCGCGGTCGTGACCCTGACATCCCTGCCACTCATCGTCGCCTACATCTTCGGACAGGAACG
CATCATCCAGGGCATGATGGCCGGCTCGATCAAGGGCTGA

Upstream 100 bases:

>100_bases
GGCTACGGGGCCACAATCTCCACGGCGATGTTTGTGATCGTCGCGGTTGTGGCGGGCCTCACCCTGCGTGCGACCCGGCG
CTTCGAGACGGAGGTCTGAG

Downstream 100 bases:

>100_bases
ATCTCAGGAGGAAGCATGTTACAGGTCAAGAACGGTCAGATCGTGAACGATCGGAACGAGCGGGTGCGGCTTCGCGGAAC
GTGCGTCGGCGGGTGGATGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTLARRSTLPGRTLLLLAALVWLLVTTLPFVFVFLTSVKSQAEIYSAPVWALPKTFDFSNYVTILRGSFFIYLRNSVFVV
VVSIALTLLLSSMAAFAFARLKFRLNGLLFSLVVAGLIVPVHVTLIPIYLMTRALHLYDTPVALIGPYVAFSLPISIFIL
TEFMRQIPRELEESAQIDGAGPITTFIRIFLPLCTPGLATVAIYNGINMWNEFIFAYVLTSNPQSRTLPLAIWDFQGQYS
ANIPAILAVVTLTSLPLIVAYIFGQERIIQGMMAGSIKG

Sequences:

>Translated_279_residues
MTLARRSTLPGRTLLLLAALVWLLVTTLPFVFVFLTSVKSQAEIYSAPVWALPKTFDFSNYVTILRGSFFIYLRNSVFVV
VVSIALTLLLSSMAAFAFARLKFRLNGLLFSLVVAGLIVPVHVTLIPIYLMTRALHLYDTPVALIGPYVAFSLPISIFIL
TEFMRQIPRELEESAQIDGAGPITTFIRIFLPLCTPGLATVAIYNGINMWNEFIFAYVLTSNPQSRTLPLAIWDFQGQYS
ANIPAILAVVTLTSLPLIVAYIFGQERIIQGMMAGSIKG
>Mature_278_residues
TLARRSTLPGRTLLLLAALVWLLVTTLPFVFVFLTSVKSQAEIYSAPVWALPKTFDFSNYVTILRGSFFIYLRNSVFVVV
VSIALTLLLSSMAAFAFARLKFRLNGLLFSLVVAGLIVPVHVTLIPIYLMTRALHLYDTPVALIGPYVAFSLPISIFILT
EFMRQIPRELEESAQIDGAGPITTFIRIFLPLCTPGLATVAIYNGINMWNEFIFAYVLTSNPQSRTLPLAIWDFQGQYSA
NIPAILAVVTLTSLPLIVAYIFGQERIIQGMMAGSIKG

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=266, Percent_Identity=30.4511278195489, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1789860, Length=275, Percent_Identity=25.8181818181818, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1790464, Length=215, Percent_Identity=26.5116279069767, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30889; Mature: 30758

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLARRSTLPGRTLLLLAALVWLLVTTLPFVFVFLTSVKSQAEIYSAPVWALPKTFDFSN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
YVTILRGSFFIYLRNSVFVVVVSIALTLLLSSMAAFAFARLKFRLNGLLFSLVVAGLIVP
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHVTLIPIYLMTRALHLYDTPVALIGPYVAFSLPISIFILTEFMRQIPRELEESAQIDGA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GPITTFIRIFLPLCTPGLATVAIYNGINMWNEFIFAYVLTSNPQSRTLPLAIWDFQGQYS
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEECCCCCC
ANIPAILAVVTLTSLPLIVAYIFGQERIIQGMMAGSIKG
CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLARRSTLPGRTLLLLAALVWLLVTTLPFVFVFLTSVKSQAEIYSAPVWALPKTFDFSN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
YVTILRGSFFIYLRNSVFVVVVSIALTLLLSSMAAFAFARLKFRLNGLLFSLVVAGLIVP
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHVTLIPIYLMTRALHLYDTPVALIGPYVAFSLPISIFILTEFMRQIPRELEESAQIDGA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GPITTFIRIFLPLCTPGLATVAIYNGINMWNEFIFAYVLTSNPQSRTLPLAIWDFQGQYS
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEECCCCCC
ANIPAILAVVTLTSLPLIVAYIFGQERIIQGMMAGSIKG
CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]