| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972062
Identifier: 94972062
GI number: 94972062
Start: 460059
End: 460718
Strand: Direct
Name: 94972062
Synonym: Dgeo_2594
Alternate gene names: NA
Gene position: 460059-460718 (Clockwise)
Preceding gene: 94972064
Following gene: 94972061
Centisome position: 80.13
GC content: 59.09
Gene sequence:
>660_bases ATGAACCGCCTGGAGAATCTGCTCCTTGGTCGCTTCACTGTGGGCCACAGGTCTGGCGTTGGGGTGGAAGCGACGACCAC AGACCTTACACAAGTACGTCTGGGTGCCGTTTTTGGCCTTTCCGTTCTTGACCGTCTGGATGCTCTGACAGGTTGGGCAC TCGGGCACCCCTCCATTACATCACGTCGTCGCAGCCACTACCAGAAACTCAAGCCGGGTGAAGTGCGGGTCTGGTACAAG CCCACTCACGTCTACGGCGTGACGCTGCGCGTTCTAGCGTGCCAGAACGTCCACGGCCAGACTCTCTTCCTGGCTTACCA AGGCCATGCTGAAAAAGCCCTGAAACGTTACGCGCTGCGCTGGACAGCAGAAAACATGCATCAGGCGCTGAAATCCAGGG GCTTTTTTCTCGAAAGCACTCACCTGACTGATCCCAGTCGGGTTTCCACGCTCCTGGCCGTGGTCGCACTGGCCTTTGTA TGGTGCTGTTTAGTGGGAGAGTTTGAGCAGCAGCGTGACCCGTCACGCTGCCTCAGGCACGGCTATCCCCCCAAAAGCCT CTTCAGACGTGGCCTGGATGCCCTTCGCGCCGTGCTGACCAAGCCCAACCGTGGGGCTGCACGCGCGTTTCCCGACTTTC TCGCCACTTTTGACCCCTAG
Upstream 100 bases:
>100_bases ACGGTCTGCCTCACTTCGGAGGCCCCCTTTTTATCCACCGGATGACGGTGTTGCGGTGGACGCCAAACACGCGCTGTACG CCTCTGAGGCTCATTCGCTC
Downstream 100 bases:
>100_bases AGAGGCGTGGCAGTCTGGGCAGGTGGGCGTGGCGTAAAGAATAACTTTCGGCATGGTGACCTCGTATGAAAAGGGGACGA ACCCACGTCCGTCCCTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; Transposase Subunit; Tn10-Like Transposase
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNRLENLLLGRFTVGHRSGVGVEATTTDLTQVRLGAVFGLSVLDRLDALTGWALGHPSITSRRRSHYQKLKPGEVRVWYK PTHVYGVTLRVLACQNVHGQTLFLAYQGHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFV WCCLVGEFEQQRDPSRCLRHGYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP
Sequences:
>Translated_219_residues MNRLENLLLGRFTVGHRSGVGVEATTTDLTQVRLGAVFGLSVLDRLDALTGWALGHPSITSRRRSHYQKLKPGEVRVWYK PTHVYGVTLRVLACQNVHGQTLFLAYQGHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFV WCCLVGEFEQQRDPSRCLRHGYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP >Mature_219_residues MNRLENLLLGRFTVGHRSGVGVEATTTDLTQVRLGAVFGLSVLDRLDALTGWALGHPSITSRRRSHYQKLKPGEVRVWYK PTHVYGVTLRVLACQNVHGQTLFLAYQGHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFV WCCLVGEFEQQRDPSRCLRHGYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24625; Mature: 24625
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLENLLLGRFTVGHRSGVGVEATTTDLTQVRLGAVFGLSVLDRLDALTGWALGHPSIT CCHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SRRRSHYQKLKPGEVRVWYKPTHVYGVTLRVLACQNVHGQTLFLAYQGHAEKALKRYALR HHHHHHHHHCCCCCEEEEECCCEEHHHHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHH WTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFVWCCLVGEFEQQRDPSRCLRH HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC GYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MNRLENLLLGRFTVGHRSGVGVEATTTDLTQVRLGAVFGLSVLDRLDALTGWALGHPSIT CCHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SRRRSHYQKLKPGEVRVWYKPTHVYGVTLRVLACQNVHGQTLFLAYQGHAEKALKRYALR HHHHHHHHHCCCCCEEEEECCCEEHHHHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHH WTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFVWCCLVGEFEQQRDPSRCLRH HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC GYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA