| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
Click here to switch to the map view.
The map label for this gene is 94972039
Identifier: 94972039
GI number: 94972039
Start: 482192
End: 483436
Strand: Direct
Name: 94972039
Synonym: Dgeo_2571
Alternate gene names: NA
Gene position: 482192-483436 (Clockwise)
Preceding gene: 94972040
Following gene: 94972038
Centisome position: 83.99
GC content: 68.59
Gene sequence:
>1245_bases GTGAAGCCGATCTGGACGTTCCTGAGCGGCCTCCTCGCGGCCCTGCTGGTGTTTTCCTGGATCTGGTTCCTGGCCACCTG GGCCCGCGAAGAGGGCCGCCTGGTGCCCCTCACCCGCACGACCGAGACCGCCGCCAGCCGCGACCTCCTGCGCCTGACCG GCACCACCGCCCGCCTTTCCGGTGACAGTGAGTATGCGACGCCCACCACCTACTCACAGGCGGTGTACGCAGCGACGCAG GATGAGGACAAGCCGGGCGCGGTGGTTCTCGTGCGGGCCGACGATCCCCTCGCGGCCATCACCGCCACGCGGCTGCAACA CATGCCGGTCAATGCCCCGATGCTGTTCGTGACGGCCAGCGGCCTGCCCCAGGAGACCCGTGCGGAACTCCAGCGCCTCG ACCCGCAGGGGGTGGCGATGGACAACAACATGCAGGTGTACCTGGTGGGCAACATCGGAGAGAACGTCGCGCAGCAGGTG CGGGGGATGGGCTTCGAGACCCGGCGCATCTTTGCGGCGGACGCGGTGAACCTCGCGGAAGTGCTCGACGAGTTCATCGC GGTGATGGAGTCCAACCACGCGGACTTGGTGCTGGTGGGCGCCACGCAAGCCCCCGAGTTCGCCCTGCCCGCCGCCAACT GGAACGCGCACGCCGGGGACGGCTTCGCCTGGGTGACCCCCACGGGTGTACCGCCCGCCACGCGCGCGATGCTGAAGCGC CGTGCCCCGAACGAACCGTACATCTACGTCTTCGCGCCGCCGACCGTCGTGGGCCAGGACGTGATGGACGACCTCTCGCA GTACGGGCACGTCCAGCGCATTCCCGGCGCCACGCCCCAGGAGATGAGTGCCCGCTGGGCGGGGTACAAGGACAGTGGCC GCAAACTCGGCTGGTGGTTCGGGCAGGAACCCCGCGGCCTGGGGTGGGGCATCGCCGAAGCGGGGCACAACGTGATCGTC GCCAACCCCGCGGACTGGCGGGAGGTCGTGACGAGCGGCGTGCTGTCACATATGGGTAAACACGCGCCTTTGATTCTCAC CAATCCCGACGGCACCCTTGCGGACAGCGTGCGCGGGTACCTGGACGTGATCCGGCCGACCCGTGTGCACCCCAGCAGTC AGGTGTACAACTTCGCCTGGATCGCTGGTCGGGGAGTTCCGGTAGCGACGCAACGAACCGTGACGGAGCTGCTCAGCGTG CAGGACGCCAGCCCCCGCACCCCGGAAACCATCAGCATGCGGTGA
Upstream 100 bases:
>100_bases CCCACCGTGTTCTGGTGGGCGGCGGTGATGGGCTTTCTCACCGCGCTGATTCCCAACTACTGGTTGGTGCGCCTGGGCCG CAAGCAGGGAGGGATGTGAC
Downstream 100 bases:
>100_bases ACCCTGGCCAGTGTGCGCTGGAAGGAGGTGGTGGGAGGCTTGTTGAAGTCAGGACCGTGAAGTGGCCCGCCGACCTACGA AAAGAGCGTGGGTTTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Transcriptional Regulator; Cell-Surface Protein; ArsR Type Transcriptional Regulator
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKPIWTFLSGLLAALLVFSWIWFLATWAREEGRLVPLTRTTETAASRDLLRLTGTTARLSGDSEYATPTTYSQAVYAATQ DEDKPGAVVLVRADDPLAAITATRLQHMPVNAPMLFVTASGLPQETRAELQRLDPQGVAMDNNMQVYLVGNIGENVAQQV RGMGFETRRIFAADAVNLAEVLDEFIAVMESNHADLVLVGATQAPEFALPAANWNAHAGDGFAWVTPTGVPPATRAMLKR RAPNEPYIYVFAPPTVVGQDVMDDLSQYGHVQRIPGATPQEMSARWAGYKDSGRKLGWWFGQEPRGLGWGIAEAGHNVIV ANPADWREVVTSGVLSHMGKHAPLILTNPDGTLADSVRGYLDVIRPTRVHPSSQVYNFAWIAGRGVPVATQRTVTELLSV QDASPRTPETISMR
Sequences:
>Translated_414_residues MKPIWTFLSGLLAALLVFSWIWFLATWAREEGRLVPLTRTTETAASRDLLRLTGTTARLSGDSEYATPTTYSQAVYAATQ DEDKPGAVVLVRADDPLAAITATRLQHMPVNAPMLFVTASGLPQETRAELQRLDPQGVAMDNNMQVYLVGNIGENVAQQV RGMGFETRRIFAADAVNLAEVLDEFIAVMESNHADLVLVGATQAPEFALPAANWNAHAGDGFAWVTPTGVPPATRAMLKR RAPNEPYIYVFAPPTVVGQDVMDDLSQYGHVQRIPGATPQEMSARWAGYKDSGRKLGWWFGQEPRGLGWGIAEAGHNVIV ANPADWREVVTSGVLSHMGKHAPLILTNPDGTLADSVRGYLDVIRPTRVHPSSQVYNFAWIAGRGVPVATQRTVTELLSV QDASPRTPETISMR >Mature_414_residues MKPIWTFLSGLLAALLVFSWIWFLATWAREEGRLVPLTRTTETAASRDLLRLTGTTARLSGDSEYATPTTYSQAVYAATQ DEDKPGAVVLVRADDPLAAITATRLQHMPVNAPMLFVTASGLPQETRAELQRLDPQGVAMDNNMQVYLVGNIGENVAQQV RGMGFETRRIFAADAVNLAEVLDEFIAVMESNHADLVLVGATQAPEFALPAANWNAHAGDGFAWVTPTGVPPATRAMLKR RAPNEPYIYVFAPPTVVGQDVMDDLSQYGHVQRIPGATPQEMSARWAGYKDSGRKLGWWFGQEPRGLGWGIAEAGHNVIV ANPADWREVVTSGVLSHMGKHAPLILTNPDGTLADSVRGYLDVIRPTRVHPSSQVYNFAWIAGRGVPVATQRTVTELLSV QDASPRTPETISMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45122; Mature: 45122
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIWTFLSGLLAALLVFSWIWFLATWAREEGRLVPLTRTTETAASRDLLRLTGTTARLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCEEEECCEEEEC GDSEYATPTTYSQAVYAATQDEDKPGAVVLVRADDPLAAITATRLQHMPVNAPMLFVTAS CCCCCCCCCCHHHEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEC GLPQETRAELQRLDPQGVAMDNNMQVYLVGNIGENVAQQVRGMGFETRRIFAADAVNLAE CCCHHHHHHHHHCCCCCEEECCCEEEEEEECCCHHHHHHHHCCCCCHHEEEHHHHHHHHH VLDEFIAVMESNHADLVLVGATQAPEFALPAANWNAHAGDGFAWVTPTGVPPATRAMLKR HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH RAPNEPYIYVFAPPTVVGQDVMDDLSQYGHVQRIPGATPQEMSARWAGYKDSGRKLGWWF CCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCEEEEEC GQEPRGLGWGIAEAGHNVIVANPADWREVVTSGVLSHMGKHAPLILTNPDGTLADSVRGY CCCCCCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH LDVIRPTRVHPSSQVYNFAWIAGRGVPVATQRTVTELLSVQDASPRTPETISMR HHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKPIWTFLSGLLAALLVFSWIWFLATWAREEGRLVPLTRTTETAASRDLLRLTGTTARLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCEEEECCEEEEC GDSEYATPTTYSQAVYAATQDEDKPGAVVLVRADDPLAAITATRLQHMPVNAPMLFVTAS CCCCCCCCCCHHHEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEC GLPQETRAELQRLDPQGVAMDNNMQVYLVGNIGENVAQQVRGMGFETRRIFAADAVNLAE CCCHHHHHHHHHCCCCCEEECCCEEEEEEECCCHHHHHHHHCCCCCHHEEEHHHHHHHHH VLDEFIAVMESNHADLVLVGATQAPEFALPAANWNAHAGDGFAWVTPTGVPPATRAMLKR HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH RAPNEPYIYVFAPPTVVGQDVMDDLSQYGHVQRIPGATPQEMSARWAGYKDSGRKLGWWF CCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCEEEEEC GQEPRGLGWGIAEAGHNVIVANPADWREVVTSGVLSHMGKHAPLILTNPDGTLADSVRGY CCCCCCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH LDVIRPTRVHPSSQVYNFAWIAGRGVPVATQRTVTELLSVQDASPRTPETISMR HHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA