Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

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The map label for this gene is 94971946

Identifier: 94971946

GI number: 94971946

Start: 573480

End: 574076

Strand: Direct

Name: 94971946

Synonym: Dgeo_2478

Alternate gene names: NA

Gene position: 573480-574076 (Clockwise)

Preceding gene: 94971951

Following gene: NA

Centisome position: 99.89

GC content: 70.69

Gene sequence:

>597_bases
ATGAAGCTCCGCACCCTGATTCGTCTCGCCGTCTCTGGCGACCGCACGGCTGGTCCGGACAATTCAGGCGCCGTTCGAGC
GGCTGCCCGCCGCGCTGCTGAGGCTGTGAGGCAGGATCCCCGTGTTCAGGAGGCTGCCGCTGGGCTGCGCGGCCGCGTGC
AGGAACTGAGCAGCGCTGCTCGCCTGCGAGCTGACCGGCACCTTGAGCGGCTGATCGAGGCCGCGCATACCCGCCAGGGG
GAACCTGTGCCCGCTGAGGTCGCCGCGTTGCTCGCTCGGCGCCGCGAGGCGCGGGAAACCCAGGCACGGCAACTACGGGC
ACGGGCCGCCCTGATCGCCCTAGGAGACGGGCCGGAACAGCGCCGGGTGCTGACCCTGGTGGCGCAGGCGACGCCTTGGG
CTGGTGGTGAGGCGGCAGAACTGCGTTACACCCAGATCCTCGACCGCCTAGCCTCTTCCGGTGAGGCGGGGGCGGAGATG
CGCGTTCACCGGGCCCTCTGGACGCTGGCCGAGCGCCACGTCCTGGCCGTAAGTCCGCATGGGCGCGTCAGCGCCTGCCC
GCTTGCGCAGGAGCCGATCTCAAACCAGTCCCTGTAA

Upstream 100 bases:

>100_bases
CAATTTTGCCGAACAAGGGTGCTGGCTTCGGCTCCACGCCACCGCCTCTTGATCAACTGGCTTTCCCCCACACTGGCCGG
CGGCATGGAACAATAGGGGG

Downstream 100 bases:

>100_bases
CCCTCACGCCCATAAGGGTGAGCTGGGGCAGCTCTCTTCTGCGTGCCAGAACAAGTGACGCTCCACTCCAGCCCAGCGGC
ACGGCGGCGCTGCTGCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKLRTLIRLAVSGDRTAGPDNSGAVRAAARRAAEAVRQDPRVQEAAAGLRGRVQELSSAARLRADRHLERLIEAAHTRQG
EPVPAEVAALLARRREARETQARQLRARAALIALGDGPEQRRVLTLVAQATPWAGGEAAELRYTQILDRLASSGEAGAEM
RVHRALWTLAERHVLAVSPHGRVSACPLAQEPISNQSL

Sequences:

>Translated_198_residues
MKLRTLIRLAVSGDRTAGPDNSGAVRAAARRAAEAVRQDPRVQEAAAGLRGRVQELSSAARLRADRHLERLIEAAHTRQG
EPVPAEVAALLARRREARETQARQLRARAALIALGDGPEQRRVLTLVAQATPWAGGEAAELRYTQILDRLASSGEAGAEM
RVHRALWTLAERHVLAVSPHGRVSACPLAQEPISNQSL
>Mature_198_residues
MKLRTLIRLAVSGDRTAGPDNSGAVRAAARRAAEAVRQDPRVQEAAAGLRGRVQELSSAARLRADRHLERLIEAAHTRQG
EPVPAEVAALLARRREARETQARQLRARAALIALGDGPEQRRVLTLVAQATPWAGGEAAELRYTQILDRLASSGEAGAEM
RVHRALWTLAERHVLAVSPHGRVSACPLAQEPISNQSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21409; Mature: 21409

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRTLIRLAVSGDRTAGPDNSGAVRAAARRAAEAVRQDPRVQEAAAGLRGRVQELSSAA
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RLRADRHLERLIEAAHTRQGEPVPAEVAALLARRREARETQARQLRARAALIALGDGPEQ
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH
RRVLTLVAQATPWAGGEAAELRYTQILDRLASSGEAGAEMRVHRALWTLAERHVLAVSPH
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECCC
GRVSACPLAQEPISNQSL
CCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MKLRTLIRLAVSGDRTAGPDNSGAVRAAARRAAEAVRQDPRVQEAAAGLRGRVQELSSAA
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RLRADRHLERLIEAAHTRQGEPVPAEVAALLARRREARETQARQLRARAALIALGDGPEQ
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH
RRVLTLVAQATPWAGGEAAELRYTQILDRLASSGEAGAEMRVHRALWTLAERHVLAVSPH
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECCC
GRVSACPLAQEPISNQSL
CCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA