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The map label for this gene is lutB [H]

Identifier: 94971919

GI number: 94971919

Start: 34388

End: 35884

Strand: Direct

Name: lutB [H]

Synonym: Dgeo_2451

Alternate gene names: 94971919

Gene position: 34388-35884 (Clockwise)

Preceding gene: 94971920

Following gene: 94971918

Centisome position: 5.99

GC content: 63.99

Gene sequence:

>1497_bases
ATGAGCGCCGGAGGCATCAAGCCTGCCCGGACTTTCCAGCAGGCCGCACGCAAGACCCTTGACAACCCGCAGATGCGCCG
CAACCTCCGGCATGCCACCACCACGATTCGCGAGAAGCGGCAGCGGGCGGTGTCGGAGCTCAGCGACTGGGAGGCCCTGC
GTGAGGAGGGCGCAGCGCTGAAAGACTTTTCTCTGGCGCATCTGGCTGACCTGCTGCTTGATCTGGAAGCGGCCATTCGG
GCGCGGGGTGGCCAGGTCCACTGGGCGCGAGATGCCGCAGAAGCCCGTGCCATCGTCGCAGACCTTGCCGCTGCCCACGG
CGCGCGTGAGGTGATCAAGGTCAAGAGCATCACCACCGACGAGATCGAACTGAATGCGGGACTCGAAGAACGCGGCATTC
ACGCGATCGAGACGGACCTGGCCGAACTGATTGTGCAATTGGCCGAGGATCGCCCCAGCCATATTCTTGTGCCGGCCATC
CACCGCAACCGTGCGGAGATTCGGGAACTCTTCCGGCGCAAGCTGGGTGCTGTCTCGCTGACCGATGATCCAAGACAGCT
GGCTGAGGCCGCCCGGCGCTATCTGCGCGAGAAATTCCTCACCACAAAGGTTGCGATATCCGGCGCCAACTTCGCGGTGG
CGGAAAGCGGCACGGTCTGTGTTGTGGAATCAGAGGGCAACGGTCGTATGTGCCTCACACTTCCTGACGTGCTGATCAGC
GTGATGGGTATCGAGAAGGTGCTGCCCACCTGGCAGGATGTGGCGGTCTTTTTGCGACTCCTGCCGCGCTCGAGCACCGC
CGAGCGGATGAACCCCTATACCTCCTTCTGGTCGGGGGTGACACCCGGCGACGGACCGCGGGAATTCCACCTCGTCCTGC
TCGATAACGGGCGCACCACGGTCTTGGCCGACGAGGTGGGGCGGCAGACGCTGCGCTGTATTCGCTGCTCGGCCTGCCTG
AATGTCTGCCCGGTGTACGAGCGGGTGGGTGGGCACGCCTACGGCAGTGTCTATCCCGGCCCCATCGGTGCCATTCTCAC
GCCGCAACTGCTACAGCTGGAGGAGAAGAACGCGAACACCCTGCCTTGGGCAAGCAGTCTGTGCGGAGCCTGTTATGACG
CTTGTCCGGTCAAGATCAATATCCCCGAAGTGTTGCTGTACCTGCGCGGCCGGATCACCGCGGCAAAACCCTTCAACGCT
GAGGCGGTGGCGTTTCGTACGGCAGCCTGGGTGATGAGTGAGCCCCACCGCTTCGAGGGAGCGATCAAGCTGGCACGCAC
CGGCCAGGGACCACTGGTGCAACAGGGCGTCATTCACACTCTGCCGGGCTTGAGCGGTTGGACCAACACCCGTGACCTGC
CGCCCCTTGCCCCGCAATCGTTTCGTGAATGGTGGCGTAAGCGTCCGCCCCAGCGGCAGCATCAGGTGGCAGAGGATGCG
CAGAGCGGCGAGGGCGAACCGCTCGCCCCGCAGACAGAAGAAGCGAGGGCCTTGTGA

Upstream 100 bases:

>100_bases
GCCTGATGCACATTGGCGGCGGTCTCCACCGACTGCGCAGTGGCACCCGCACCATTCACCTGGCAGAAATTTTGGCCAGC
ACCGAAGAGGAGGTCTTCAG

Downstream 100 bases:

>100_bases
GCACAGAAGCCAAGCTGGATATTCTGACGCGCATCAACCGCGCCGCAACAGCTGAGGACCGGCCAGTGCAGCGCGTCCCC
GTTCGCTCGTCTCCCCGTCC

Product: Iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MSAGGIKPARTFQQAARKTLDNPQMRRNLRHATTTIREKRQRAVSELSDWEALREEGAALKDFSLAHLADLLLDLEAAIR
ARGGQVHWARDAAEARAIVADLAAAHGAREVIKVKSITTDEIELNAGLEERGIHAIETDLAELIVQLAEDRPSHILVPAI
HRNRAEIRELFRRKLGAVSLTDDPRQLAEAARRYLREKFLTTKVAISGANFAVAESGTVCVVESEGNGRMCLTLPDVLIS
VMGIEKVLPTWQDVAVFLRLLPRSSTAERMNPYTSFWSGVTPGDGPREFHLVLLDNGRTTVLADEVGRQTLRCIRCSACL
NVCPVYERVGGHAYGSVYPGPIGAILTPQLLQLEEKNANTLPWASSLCGACYDACPVKINIPEVLLYLRGRITAAKPFNA
EAVAFRTAAWVMSEPHRFEGAIKLARTGQGPLVQQGVIHTLPGLSGWTNTRDLPPLAPQSFREWWRKRPPQRQHQVAEDA
QSGEGEPLAPQTEEARAL

Sequences:

>Translated_498_residues
MSAGGIKPARTFQQAARKTLDNPQMRRNLRHATTTIREKRQRAVSELSDWEALREEGAALKDFSLAHLADLLLDLEAAIR
ARGGQVHWARDAAEARAIVADLAAAHGAREVIKVKSITTDEIELNAGLEERGIHAIETDLAELIVQLAEDRPSHILVPAI
HRNRAEIRELFRRKLGAVSLTDDPRQLAEAARRYLREKFLTTKVAISGANFAVAESGTVCVVESEGNGRMCLTLPDVLIS
VMGIEKVLPTWQDVAVFLRLLPRSSTAERMNPYTSFWSGVTPGDGPREFHLVLLDNGRTTVLADEVGRQTLRCIRCSACL
NVCPVYERVGGHAYGSVYPGPIGAILTPQLLQLEEKNANTLPWASSLCGACYDACPVKINIPEVLLYLRGRITAAKPFNA
EAVAFRTAAWVMSEPHRFEGAIKLARTGQGPLVQQGVIHTLPGLSGWTNTRDLPPLAPQSFREWWRKRPPQRQHQVAEDA
QSGEGEPLAPQTEEARAL
>Mature_497_residues
SAGGIKPARTFQQAARKTLDNPQMRRNLRHATTTIREKRQRAVSELSDWEALREEGAALKDFSLAHLADLLLDLEAAIRA
RGGQVHWARDAAEARAIVADLAAAHGAREVIKVKSITTDEIELNAGLEERGIHAIETDLAELIVQLAEDRPSHILVPAIH
RNRAEIRELFRRKLGAVSLTDDPRQLAEAARRYLREKFLTTKVAISGANFAVAESGTVCVVESEGNGRMCLTLPDVLISV
MGIEKVLPTWQDVAVFLRLLPRSSTAERMNPYTSFWSGVTPGDGPREFHLVLLDNGRTTVLADEVGRQTLRCIRCSACLN
VCPVYERVGGHAYGSVYPGPIGAILTPQLLQLEEKNANTLPWASSLCGACYDACPVKINIPEVLLYLRGRITAAKPFNAE
AVAFRTAAWVMSEPHRFEGAIKLARTGQGPLVQQGVIHTLPGLSGWTNTRDLPPLAPQSFREWWRKRPPQRQHQVAEDAQ
SGEGEPLAPQTEEARAL

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=475, Percent_Identity=40.2105263157895, Blast_Score=360, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 54835; Mature: 54704

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGGIKPARTFQQAARKTLDNPQMRRNLRHATTTIREKRQRAVSELSDWEALREEGAAL
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KDFSLAHLADLLLDLEAAIRARGGQVHWARDAAEARAIVADLAAAHGAREVIKVKSITTD
HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCC
EIELNAGLEERGIHAIETDLAELIVQLAEDRPSHILVPAIHRNRAEIRELFRRKLGAVSL
CEEECCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHCCCCC
TDDPRQLAEAARRYLREKFLTTKVAISGANFAVAESGTVCVVESEGNGRMCLTLPDVLIS
CCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCEEEEEECCCCEEEEEHHHHHHH
VMGIEKVLPTWQDVAVFLRLLPRSSTAERMNPYTSFWSGVTPGDGPREFHLVLLDNGRTT
HHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEEEECCCCEE
VLADEVGRQTLRCIRCSACLNVCPVYERVGGHAYGSVYPGPIGAILTPQLLQLEEKNANT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHCCCCC
LPWASSLCGACYDACPVKINIPEVLLYLRGRITAAKPFNAEAVAFRTAAWVMSEPHRFEG
CCCHHHHHHHHHHCCCEEECHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCHHHH
AIKLARTGQGPLVQQGVIHTLPGLSGWTNTRDLPPLAPQSFREWWRKRPPQRQHQVAEDA
HEEEEECCCCCCHHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
QSGEGEPLAPQTEEARAL
HCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
SAGGIKPARTFQQAARKTLDNPQMRRNLRHATTTIREKRQRAVSELSDWEALREEGAAL
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KDFSLAHLADLLLDLEAAIRARGGQVHWARDAAEARAIVADLAAAHGAREVIKVKSITTD
HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCC
EIELNAGLEERGIHAIETDLAELIVQLAEDRPSHILVPAIHRNRAEIRELFRRKLGAVSL
CEEECCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHCCCCC
TDDPRQLAEAARRYLREKFLTTKVAISGANFAVAESGTVCVVESEGNGRMCLTLPDVLIS
CCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCEEEEEECCCCEEEEEHHHHHHH
VMGIEKVLPTWQDVAVFLRLLPRSSTAERMNPYTSFWSGVTPGDGPREFHLVLLDNGRTT
HHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEEEECCCCEE
VLADEVGRQTLRCIRCSACLNVCPVYERVGGHAYGSVYPGPIGAILTPQLLQLEEKNANT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHCCCCC
LPWASSLCGACYDACPVKINIPEVLLYLRGRITAAKPFNAEAVAFRTAAWVMSEPHRFEG
CCCHHHHHHHHHHCCCEEECHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCHHHH
AIKLARTGQGPLVQQGVIHTLPGLSGWTNTRDLPPLAPQSFREWWRKRPPQRQHQVAEDA
HEEEEECCCCCCHHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
QSGEGEPLAPQTEEARAL
HCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA