The gene/protein map for NC_008010 is currently unavailable.
Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

Click here to switch to the map view.

The map label for this gene is 94971869

Identifier: 94971869

GI number: 94971869

Start: 86915

End: 87361

Strand: Direct

Name: 94971869

Synonym: Dgeo_2401

Alternate gene names: NA

Gene position: 86915-87361 (Clockwise)

Preceding gene: 94971870

Following gene: 94971868

Centisome position: 15.14

GC content: 70.69

Gene sequence:

>447_bases
ATGACCGCGCTAGAGGGACCGCAGGCGGTCGCCTTCGCCCAGAGCGTGCTGGACGCGCAGCCTTTCAGCGTGCTCGTCGG
GGCGCGGGTGGAGCAGATGGCCCCCGACGGCGTGGTTGTGCGCGTGCCCTTTCGCCGCGACCTCACCCAGCACCACGGGT
TCGCGCACGGGGGCCTGCAGGCCGCGCTCGCCGACATCGCCCTTACCTTTATGGGCGCGGCGGCGCTGGGACCGCGCGTG
CTGACCAGCGAATTCAAGATCAATTTCCTGCGGCCCGGCATGGGTGAGGCGCTGGTGGCCCGCGGGAGCATCATCAGTGC
CGGGAAGCGGCAGGCGGTGACGCGCTGCGACATCTTCGCCGTCCAGGCCGGCGAGGAAAAGCTGGTTGCCACGGCCCTGG
GCACCATCGTGACGGCGGACGTGCCCCCGGCGGGAGGAACCGAATGA

Upstream 100 bases:

>100_bases
ACGGCCCGGGGTACGTGCAGCTCACCGTCGCCAACACCATTGAGCTGGAGGGCGCGCCGAAACCCGCCGCCACTGCCGAA
ACCGTGATGCGGGTGTACGT

Downstream 100 bases:

>100_bases
AGCGGCGCACGCTGCTGGGTGCGGGCCTCGCGGCAGGCCTGGGCTGGCTCCTCCTCGCGCCCACGCGGGTGCGGCCCGTG
GCCTGGGAGGGGCCGGGGCT

Product: phenylacetic acid degradation-related protein

Products: NA

Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation Protein; Thioesterase; Thioesterase Family Protein; Phenylacetic Acid Degradation Protein PaaI; Phenylacetic Acid Degradation Protein PAAI; Thioesterase/Thiol Ester Dehydrase-Isomerase; Phenylacetic Acid Degradation Protein Paai; Thioesterase Superfamily; LOW QUALITY PROTEIN Thioesterase Superfamily Protein; Domain 1 Protein; Protein Possibly Involved In Aromatic Compounds Catabolism; Phenylacetic Acid Degradation Protein PaaD

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTALEGPQAVAFAQSVLDAQPFSVLVGARVEQMAPDGVVVRVPFRRDLTQHHGFAHGGLQAALADIALTFMGAAALGPRV
LTSEFKINFLRPGMGEALVARGSIISAGKRQAVTRCDIFAVQAGEEKLVATALGTIVTADVPPAGGTE

Sequences:

>Translated_148_residues
MTALEGPQAVAFAQSVLDAQPFSVLVGARVEQMAPDGVVVRVPFRRDLTQHHGFAHGGLQAALADIALTFMGAAALGPRV
LTSEFKINFLRPGMGEALVARGSIISAGKRQAVTRCDIFAVQAGEEKLVATALGTIVTADVPPAGGTE
>Mature_147_residues
TALEGPQAVAFAQSVLDAQPFSVLVGARVEQMAPDGVVVRVPFRRDLTQHHGFAHGGLQAALADIALTFMGAAALGPRVL
TSEFKINFLRPGMGEALVARGSIISAGKRQAVTRCDIFAVQAGEEKLVATALGTIVTADVPPAGGTE

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15307; Mature: 15176

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALEGPQAVAFAQSVLDAQPFSVLVGARVEQMAPDGVVVRVPFRRDLTQHHGFAHGGLQ
CCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHCCCCCEEEEECCHHHHHHHCCCCCCHHH
AALADIALTFMGAAALGPRVLTSEFKINFLRPGMGEALVARGSIISAGKRQAVTRCDIFA
HHHHHHHHHHHHHHHCCCEEEHHHEEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHEEEE
VQAGEEKLVATALGTIVTADVPPAGGTE
EECCCHHHHHHHHHHEEECCCCCCCCCC
>Mature Secondary Structure 
TALEGPQAVAFAQSVLDAQPFSVLVGARVEQMAPDGVVVRVPFRRDLTQHHGFAHGGLQ
CCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHCCCCCEEEEECCHHHHHHHCCCCCCHHH
AALADIALTFMGAAALGPRVLTSEFKINFLRPGMGEALVARGSIISAGKRQAVTRCDIFA
HHHHHHHHHHHHHHHCCCEEEHHHEEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHEEEE
VQAGEEKLVATALGTIVTADVPPAGGTE
EECCCHHHHHHHHHHEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA