| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94971865
Identifier: 94971865
GI number: 94971865
Start: 90815
End: 91903
Strand: Direct
Name: 94971865
Synonym: Dgeo_2397
Alternate gene names: NA
Gene position: 90815-91903 (Clockwise)
Preceding gene: 94971866
Following gene: 94971864
Centisome position: 15.82
GC content: 69.88
Gene sequence:
>1089_bases GTGACCCGCCCCGACACCGCCCCCGTCCGCCCTGGCGAAGAACTGCCCCTTCCAGCCCTTCGGGAAGCGTTGCGCGGCAA GGTGGCGGGAGATGTCGACCACCTCACCGTCGAGCAGTTCCCCGGAGGCTTCTCCAACTTGACCTACCTGGTGCGGCTGG GGGAGGGGGAGGACGCCCGCGAGTACGTGTTGCGCCGCGCACCCCTTGGCCCAGTGGCGCGGGGGGCCCACGACATGCCG CGCGAGTACCGGCTGCTCTCGCGGGTGCATCCGGTGCTGCCCGTTGCGCCTAAGCCCGTGCTGCTGGTGGAGGACGCCTC CGTGATCGGCGCCCCTTTTTACCTCATGGAGCGGCGGCGCGGCACGGTGGTGCGCACCCAGCTTCCTCCCGAATACGCCG CCCTGCCCGCTGCGCCCCGCCAGCTCTCGGAGGCGCTGGTGGATACCCTGGCGGACCTGCACGCCGTCGATATTGACGCG GCGGGCCTGCGTGACCTCGGCAAGCCGGAGGGGTTCAACACCCGGCAGGTTGAGGGCTGGGCGGGGCGGTGGCGCCGTGC TCGGACAGACGATCTGCCCCCGCCGGGGGAGTTGCACGACGAGGACGTGATCGCCTGGCTCACCGCCCACACCCCCCCCG AATCGGCCCACACGCTCGTCCACAACGACTTTAAACTCGATAACCTGATGTTCGATCCCGCAGATCCCTCGCGGGTGGTG GCGCTCCTCGACTGGGAGATGACCACTGTGGGTGATCCCCTGGTGGACCTGGGCCTGACGCTGACCTACTGGACGTTGCC GGAGCAGCCGGGCCGGGAGGTCAGCCACGTGGGGGCGCACGCCCCGGGGTTTCTGTCGCGTGAGGACTTTTTGGCGCGTT ACGCCGAGCGCAGTGGGCGCGACGTGCGGGGCGTGGCGTGGTACGAGATCCTGGGGCACTTTAAGCTCGCGGTGATTGTG GGGCAAATCTATGCGCGCTACCGCGCCGGACAGACCCAAGACCCCCGCTTTGCGCCGCTTGGCCAGCAGGCCGCGTGGCT GATCGGGGAGGCCTGGCGGCGCATCGGGGAGACCGAGGCGGCAGGGTAA
Upstream 100 bases:
>100_bases CCTGGATCGGCAAGATGGTGCGGCTGCGCGGCAAGGCGATGGCGCTCTTGGAGGGGCAGCAGACCTCTCAGGCTGAGGTG CCCCGCACCGGGGGCCACCC
Downstream 100 bases:
>100_bases GCTCGCGGGGTTTCCGTTTTCCCGCTGCCGGGGCATCATGCAGGCCAAGGAGGCACCATGACGGACGTTTCGGGGACGGA CGCGGCGGCATACCGTGAGG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTRPDTAPVRPGEELPLPALREALRGKVAGDVDHLTVEQFPGGFSNLTYLVRLGEGEDAREYVLRRAPLGPVARGAHDMP REYRLLSRVHPVLPVAPKPVLLVEDASVIGAPFYLMERRRGTVVRTQLPPEYAALPAAPRQLSEALVDTLADLHAVDIDA AGLRDLGKPEGFNTRQVEGWAGRWRRARTDDLPPPGELHDEDVIAWLTAHTPPESAHTLVHNDFKLDNLMFDPADPSRVV ALLDWEMTTVGDPLVDLGLTLTYWTLPEQPGREVSHVGAHAPGFLSREDFLARYAERSGRDVRGVAWYEILGHFKLAVIV GQIYARYRAGQTQDPRFAPLGQQAAWLIGEAWRRIGETEAAG
Sequences:
>Translated_362_residues MTRPDTAPVRPGEELPLPALREALRGKVAGDVDHLTVEQFPGGFSNLTYLVRLGEGEDAREYVLRRAPLGPVARGAHDMP REYRLLSRVHPVLPVAPKPVLLVEDASVIGAPFYLMERRRGTVVRTQLPPEYAALPAAPRQLSEALVDTLADLHAVDIDA AGLRDLGKPEGFNTRQVEGWAGRWRRARTDDLPPPGELHDEDVIAWLTAHTPPESAHTLVHNDFKLDNLMFDPADPSRVV ALLDWEMTTVGDPLVDLGLTLTYWTLPEQPGREVSHVGAHAPGFLSREDFLARYAERSGRDVRGVAWYEILGHFKLAVIV GQIYARYRAGQTQDPRFAPLGQQAAWLIGEAWRRIGETEAAG >Mature_361_residues TRPDTAPVRPGEELPLPALREALRGKVAGDVDHLTVEQFPGGFSNLTYLVRLGEGEDAREYVLRRAPLGPVARGAHDMPR EYRLLSRVHPVLPVAPKPVLLVEDASVIGAPFYLMERRRGTVVRTQLPPEYAALPAAPRQLSEALVDTLADLHAVDIDAA GLRDLGKPEGFNTRQVEGWAGRWRRARTDDLPPPGELHDEDVIAWLTAHTPPESAHTLVHNDFKLDNLMFDPADPSRVVA LLDWEMTTVGDPLVDLGLTLTYWTLPEQPGREVSHVGAHAPGFLSREDFLARYAERSGRDVRGVAWYEILGHFKLAVIVG QIYARYRAGQTQDPRFAPLGQQAAWLIGEAWRRIGETEAAG
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=354, Percent_Identity=31.9209039548023, Blast_Score=168, Evalue=6e-42, Organism=Homo sapiens, GI211971008, Length=354, Percent_Identity=31.9209039548023, Blast_Score=168, Evalue=6e-42, Organism=Homo sapiens, GI38505218, Length=337, Percent_Identity=30.5637982195846, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17562446, Length=366, Percent_Identity=28.6885245901639, Blast_Score=162, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40096; Mature: 39965
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00108 PROTEIN_KINASE_ST
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPDTAPVRPGEELPLPALREALRGKVAGDVDHLTVEQFPGGFSNLTYLVRLGEGEDAR CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHEEHHHCCCCCCCEEEEEEECCCCCHH EYVLRRAPLGPVARGAHDMPREYRLLSRVHPVLPVAPKPVLLVEDASVIGAPFYLMERRR HHHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHCCCHHHHHCCC GTVVRTQLPPEYAALPAAPRQLSEALVDTLADLHAVDIDAAGLRDLGKPEGFNTRQVEGW CCEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCH AGRWRRARTDDLPPPGELHDEDVIAWLTAHTPPESAHTLVHNDFKLDNLMFDPADPSRVV HHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCEECCCEEECCCCCCCEE ALLDWEMTTVGDPLVDLGLTLTYWTLPEQPGREVSHVGAHAPGFLSREDFLARYAERSGR EEEECCHHHCCCHHHHHCCEEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCC DVRGVAWYEILGHFKLAVIVGQIYARYRAGQTQDPRFAPLGQQAAWLIGEAWRRIGETEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC AG CC >Mature Secondary Structure TRPDTAPVRPGEELPLPALREALRGKVAGDVDHLTVEQFPGGFSNLTYLVRLGEGEDAR CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHEEHHHCCCCCCCEEEEEEECCCCCHH EYVLRRAPLGPVARGAHDMPREYRLLSRVHPVLPVAPKPVLLVEDASVIGAPFYLMERRR HHHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHCCCHHHHHCCC GTVVRTQLPPEYAALPAAPRQLSEALVDTLADLHAVDIDAAGLRDLGKPEGFNTRQVEGW CCEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCH AGRWRRARTDDLPPPGELHDEDVIAWLTAHTPPESAHTLVHNDFKLDNLMFDPADPSRVV HHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCEECCCEEECCCCCCCEE ALLDWEMTTVGDPLVDLGLTLTYWTLPEQPGREVSHVGAHAPGFLSREDFLARYAERSGR EEEECCHHHCCCHHHHHCCEEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCC DVRGVAWYEILGHFKLAVIVGQIYARYRAGQTQDPRFAPLGQQAAWLIGEAWRRIGETEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC AG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA