Definition Candidatus Koribacter versatilis Ellin345, complete genome.
Accession NC_008009
Length 5,650,368

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Identifier: 94970068

GI number:

Start: 3610157

End: 3612691

Strand: Reverse

Name: Not Available

Synonym: Acid345_3041

Alternate gene names: NA

Gene position: NA

Preceding gene: 94970069

Following gene: 94970067

Centisome position: NA

GC content: NA

Gene sequence:

>2535_bases
ATGCATGATGTACGCCTCGCTTTTCGTCAGTTCCTGAAGTCGCCGGGATTTGTGTTCACCGTAGTGCTGACGATCGCGCT
GGGAATTGGCGCCAACACGGCGATCTTCACTCTGGTTCATGCGGTGCTGTTGAAGTCTCTGCCCGTGGTGGATCCCAATA
CTCTGTATCGAATTGGCGACAAGGACGACTGCTGCGTGAATGGCGGCTTCATGGGCGACGATGGCGACTTCGACTTGTTC
TCATACGACCTCTACACGAGCCTCCGCGATAACACGCCGGAGTTCGAGCAACTGGCGGCCATGCAATCGGGCGGGAACGA
GATGTCGGTCCGGCGGGGATCAGCGCTAGGTAAGGCGCTGCGCACCGAGTACGTGTCGGGAAATTACTTCACCACGTTCG
GAATTGTTCCTTACACCGGTCGGCTCATGACGATGAGTGATGACGTTACCGGCGCCGCGCCGGCGGTGGTGATGAGCTAC
ACGACGTGGCAGAACGATTATGCTGGCGATCCTTCGCTGGTTGGTTCCACGTTGTATCTGCAAGGCAAGCCGGTGACGGT
GATTGGCATTGCGCCGCCGGGATTCTATGGGGACCGCCTGCGCAGCAGTCCGCCGGCACTGTGGATTCCGCTGGCAATCG
AGCCGGTGCTGGAAGGGAACACTTCGATCCTTCACGTGAGAGAGAGCAATTGGCTCTATGCAATTGGACGCCTCAAGCCC
GGGGTGCAGATAGGACCGCTGCAAGCGAAGGTGTCGAACACTCTGCGGGTGTGGCTGTCGGGCGTGGAGATGTACACCCG
CAACGGTGGGAAAGAGGTGATCCCGAAGCAGCACGTGGTGATCGTGCCGGCGGGGGGCGGGATCCAGAACATGCAGCAGG
AGACCGGGAAGGGCCTGTATCTGCTCATGGCGATCTCTGCGCTGGTGTTATTGGTGGCGTGCGCGAACGTGGCGAACTTG
CTGCTGGCGCGCGGCGCGACACGGCGAACGGAAATTTCCATTCGCATGGCGATGGGCGCGGCGCGGAAGAGGTTAATTCG
CTCGATGCTTGTGGAGAGCGTTCTGCTCGCGTTCATGGCGGGGCTGGTTGGACTTGTGGTGGCTTACGCGGGAACGCGGA
CGATTCTCTCGCTGGCATTCCCGGATTCGCCGCAGTTGCCTATCCATGCGACGCCATCGTTACCGGTGTTGGGATTTGCA
CTGCTGTTGTCGCTGGGCACAGGGGTGATCTTCGGCATCGTGCCGGCGTGGATTACGTCACATTCCGATCCGGCAGATGC
GCTGCGCGGAACCAGCCGCACGACCAAAGACGGAGCATCGATGCCGCAGAAGTGGTTGATCGTGTTCCAGGCGGCGCTCT
CGTTGGCGCTGCTGGTAAGTGCGGGACTGATGACGAAGAGCCTGCGCAACTTGCAGCACCAGGACTTCGGCTTAAAGACC
GACAACCGCTACGTGGTGCACTTTGACCTTATGGGCGCCGGATACACGCCCACCACTTTGCAGCCGCTGTATCAGCGATT
GGAAGAGCGGTTCGGTTCGATTCCGGGAGTGGACGGTGTAGGTATCGCGCTCTACAGCACGCTCGAGGGAAACAACTGGG
GCGAGGGCATTCGTATAGAAGGGCGTCCGGAGCCGGGGCCGCAGGAGGATAACGGGTCGTCGTGGGACCGTGTGAATCCG
CAATTCTTCAAGATGATGGGTCAGCCGATTCTGCGCGGGCGCGGGTTACAGGAGTCGGACACGCCGACATCGCAGTTCGT
GGCGGTGGTCAACGAGGCGTTTGTGAAGAAGTTCTTCCCGAAGGAAGAGCCGATCGGCAAGCACTTCGGAGTTTTCGATA
TGAAGTATTCCGGTGCGTTCGAGATCGTGGGAGTGGTGAAGGACGCCAAGTATCAGGACCCGCACCAGAAGATGCGAGCG
ATGTATTTCCGTCCGCTGACGCAGGAATTGAAAGTGGAAGAACCGAACGCCAAAATGGCGGAGGGACGATCGCTCTACGC
CAACTCGATCACGCTGCACTTTTCGCAGCCGCCATCGAACGTGGATGAACTGGTCCGGAGGACGCTGGCGGACATTGATC
CCAACATCACGATCAACAGCCTGCATTCGCTGGAATTCCAGATTGGCGACAACCTCACACAGGAACGTTTGATTTCACGG
CTGACGATGTTGTTTGGCGCACTCGCGCTGATACTCGCGTCGGTGGGACTGTACGGAATTACGTCGTATGCGGTGGCCCG
CCGGACGGGGGAGATTGGATTGCGGATGGCCCTTGGTGCGGACCGCGGCAACGTGGTGCGGCTGGTATTGCGTGGGGTAG
CCGTTCGAGTGGGATTGGGGCTGGCGATTGGGATCCCGCTCACGCTGATCGGGGGGCATTACATGGCGGACCAGCTCTAC
AACGTGAAGGCGTGGGACCCGGCGAGTCTGGCGATCGGGATCGCGGTGCTGTCGGCTGCGGCGCTGGTGGCAGGATTTAT
TCCGGCGCGGAGGGCGGCAAGTATTGAGCCAATGCAGGCTTTAAGGATTGAGTGA

Upstream 100 bases:

>100_bases
GTAATTTCATAGAATCCTAAGTACCTTGTTTTCTGCATGGAACCGTCGTGTGCTTGGCAACGTAACTGCCTGTATAGCTC
GCGAGAGGACCCAATCGACC

Downstream 100 bases:

>100_bases
TTTTGTACCGCCGGTATAATTCGGCGCCATGAAGAAACTGTCTGGAATTGTGAGGGCGTTATGCGCGGTGATCGTCGCAT
GCGCCCTTTTTGCTGTCGTC

Product: ABC efflux pump, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>844_residues
MHDVRLAFRQFLKSPGFVFTVVLTIALGIGANTAIFTLVHAVLLKSLPVVDPNTLYRIGDKDDCCVNGGFMGDDGDFDLF
SYDLYTSLRDNTPEFEQLAAMQSGGNEMSVRRGSALGKALRTEYVSGNYFTTFGIVPYTGRLMTMSDDVTGAAPAVVMSY
TTWQNDYAGDPSLVGSTLYLQGKPVTVIGIAPPGFYGDRLRSSPPALWIPLAIEPVLEGNTSILHVRESNWLYAIGRLKP
GVQIGPLQAKVSNTLRVWLSGVEMYTRNGGKEVIPKQHVVIVPAGGGIQNMQQETGKGLYLLMAISALVLLVACANVANL
LLARGATRRTEISIRMAMGAARKRLIRSMLVESVLLAFMAGLVGLVVAYAGTRTILSLAFPDSPQLPIHATPSLPVLGFA
LLLSLGTGVIFGIVPAWITSHSDPADALRGTSRTTKDGASMPQKWLIVFQAALSLALLVSAGLMTKSLRNLQHQDFGLKT
DNRYVVHFDLMGAGYTPTTLQPLYQRLEERFGSIPGVDGVGIALYSTLEGNNWGEGIRIEGRPEPGPQEDNGSSWDRVNP
QFFKMMGQPILRGRGLQESDTPTSQFVAVVNEAFVKKFFPKEEPIGKHFGVFDMKYSGAFEIVGVVKDAKYQDPHQKMRA
MYFRPLTQELKVEEPNAKMAEGRSLYANSITLHFSQPPSNVDELVRRTLADIDPNITINSLHSLEFQIGDNLTQERLISR
LTMLFGALALILASVGLYGITSYAVARRTGEIGLRMALGADRGNVVRLVLRGVAVRVGLGLAIGIPLTLIGGHYMADQLY
NVKAWDPASLAIGIAVLSAAALVAGFIPARRAASIEPMQALRIE

Sequences:
NA

Specific function: NA

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA