| Definition | Candidatus Koribacter versatilis Ellin345, complete genome. |
|---|---|
| Accession | NC_008009 |
| Length | 5,650,368 |
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Identifier: 94967785
GI number:
Start: 930963
End: 933599
Strand: Reverse
Name: Not Available
Synonym: Acid345_0754
Alternate gene names: NA
Gene position: NA
Preceding gene: 94967786
Following gene: 94967784
Centisome position: NA
GC content: NA
Gene sequence:
>2637_bases ATGAAGTTGTTCCCGAGCTTCGGTTCTGAGCGGCGTAAGCGCGAATTGCAGGAAGAGATGGATGCTCACCTGCAGATGGC GATTGCCGATCGAGTGGCGCGAGGCGAGACGGTAGAGACGGCGCGACAAGCGGTGCTTCGGGAATTTGGAAATATTCCCC TGGTGCAGGATGTGACGCGCGACATATGGGGCCTGACCTGGCTTGAACAGCTAAGCCGGGATCTCCGTTACGCGTTACGG CAACTGCGCAAAAGTCCCGGTTTCACGATCACCGCGACGACGATGCTGGCAGTAGCCATCTGCGCCAACAGCACCGTATT CAGTTGGATCGACGGTACGATGTTGCGTCCCATTCCTGGCGCGCGGGACACGGGCGATCTTGTTAGCCTGCAGCGGGGAG AACGGAACTTCTCTCCGACTCCGCCCTTCTCGTATCTCGACTATCGCGATCTGCGCGAGCAGAACCACACCTTCACCGGA ATCCTCGCATATCATCACGATTGGATCACGCTGACTGGCGGCGCACAGCCGGAGCGTGCCTATATTGCGAACGTGTCGGC AAATTATTTCGATGTGCTCGGCATTAAGCCGGTGCTGGGGCGTTTCTTTCTGCCTGAAGAAGAGACGGCTCCAGGTGCCG TTCCCAACGTGGTCCTGGGTTACTCGCTTTGGAAGACGCGCTATGCCAAAGACCCGGCGATTGTGGGCAAGTCGATCGAG ATCGCCCGGCATCCTTTGACGGTCATCGGCGTGGCGCCGGAGGGGGTTGTGGGAGCGATGCCCGGGATCCGTGAAGATCT GTGGGTAACGCTTGATCCCCTCGGGACGGATGCGTGGCGGATGACGCATCGCAGTGGTGGTGCGGTCTGGCTGAATGTAA TTGGAAGATTGCGGCCCGACGTGAGCCGTGCCCAGGCAGCCCAGGACCTCGACACGGTGATGCACAACATCGTGGTGGCG TATCCGGACGATCATCTCGGCGATAACCGCATCTCGCTGGACCCCATGTGGCGCTCCCCATTCGGCGCCAACGGATACCT GGCAACGACGCTGCCCATTCTGCTCGCCTTTGCCGCTGTGGTGCTGTTGCTGACCGGCGCGAACGTCGCTACGCTCACGC TAGTACGGTTTGTATCCCGGCGGCGTGAGCTTGCCATCCGGCAGTCGCTCGGGGCGAATCGTATGCAACTGGTACGGCAG CTGGTGATGGAGGGCGTGGTGCTTTCCATCGTCGCAGGAGCCGCGGCCCTTGGGTTGACAGCGTGGACATCGAAGACATT CGCATGGTTCTTTCCGGCGAGTTCGAATCCCATCATTCTGAACGGGAGCATGGACCATAGGGTGGTAATCGGGATTGCAG TGTCGTCCCTGTTGGCCGCGATGCTGTGCGGCGCGCTTCCCGCCTGGCGTTCGGCCCACGCGCCGGCAGCTGAGGTACTC AAGGCAGAGTCTGCAAGTATCTCCGGCGGATCACGCAACCGGAAATTGCTCAGCGGGCTGGTGGTTGCGCAAATCGCGCT TTCACTGCCGCTGCTGTTGTGTTCCGGGTTGTTTCTGCGAACACTGCGGAATCTCGCCCACGCGAATCCCGGATTTGAAC AGGACCACATTCTGACTGCGACTGTGGGGCTAAATATCGCCGGCTACAGCCACGACGAGGAACAGCTGATCCGTCACAAG ATACTTGATCGCGTGTCGGCACTCCCCGGCGTAAAGGCTGCGTCTTTTACGGACTGGATTCCGATGACCCTGGGCCACAA GGGGGAGGATGCGTATCCGGAAGGGTATGTGCCACACCCGCATGAATCTTTGCAGGTGTACCACGCCGAGGTGGCCCCGC GGTATTTCGAATCCCTTCATATACCCATTCTGGAAGGTCGCGAGTTTACGCCGGATGACGATGAAAAGGCCCCGCGGGTA CTCATCGTGGATCAGACGGCGGCGAGGCGATACTGGCCCGGACAGGATCCGCTGGGAAAGAGACTCAGGATATGGGGCCG CCTTTTCACGGTCGTCGGCCTCGCGAAAAATTCAACACATATGTTGATGAATGAGTCCCCGGAGCCCATGGTGTATATGA GCTTCTTCCAGGAGGGGTACGAGACGATCGTGCAGGTGAAGACCGAGGGAAATCCGGCCGACTTTGCGCCAGCGGTGGAG AACGCCATCCACGAAATTGATCCACGGCTCCCGGTTTTCGATGTGCGTCCCATGCGCGAGAGTACCCAACTGGCGAGCAG TTTCGCCGTCATAGAGAGCGCCCTGGCGGGAATGTTCGCGATGATCGGGCTGGTTCTTGCGGCAACCGGCATCTACGGCG TGGTGGCATATCGAACCCAAATGCGTACCCACGAGATCGGAATACGAATGGCTCTGGGTGCTTCGCGCGTCAACGTGCTG CGGCTCGTGCTGTCGCAGGGATTATGGCTCACAGCCATTGGGCTGACGCTGGGATTGGCGTTTGCAATGGGACTGACACG TTTCATCGCCCGACTGTTGTACGGAATCGGCGCCAACGATCCGGTCACCGTCGTTTCCGTCGTCATGCTCCTGGGAGCAA TGTCGTTGCTGGCATGCTACCTTCCCGCGCATCGAGCGATGCGCCGAAACCCTGTGACTGCGATTCGCGAACTGTAA
Upstream 100 bases:
>100_bases CCACGGGGAAAAAGCAGTTGGTCTCCGATCTGGGCCGATGGGAGCGGATCGTCGAAGCGATTGGGTCGGTGATGTACGTC AAGCCGGAGGAGAGTGAGTC
Downstream 100 bases:
>100_bases ACCGCAGCACGGACTCGACGCGGATCCGACGCGCGGCGACGTCGGAGCACGCTGGAGAAGCGAGGAGTATAAATGTGACG AAACATTTCTGACGGTTCCG
Product: ABC efflux pump, inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>878_residues MKLFPSFGSERRKRELQEEMDAHLQMAIADRVARGETVETARQAVLREFGNIPLVQDVTRDIWGLTWLEQLSRDLRYALR QLRKSPGFTITATTMLAVAICANSTVFSWIDGTMLRPIPGARDTGDLVSLQRGERNFSPTPPFSYLDYRDLREQNHTFTG ILAYHHDWITLTGGAQPERAYIANVSANYFDVLGIKPVLGRFFLPEEETAPGAVPNVVLGYSLWKTRYAKDPAIVGKSIE IARHPLTVIGVAPEGVVGAMPGIREDLWVTLDPLGTDAWRMTHRSGGAVWLNVIGRLRPDVSRAQAAQDLDTVMHNIVVA YPDDHLGDNRISLDPMWRSPFGANGYLATTLPILLAFAAVVLLLTGANVATLTLVRFVSRRRELAIRQSLGANRMQLVRQ LVMEGVVLSIVAGAAALGLTAWTSKTFAWFFPASSNPIILNGSMDHRVVIGIAVSSLLAAMLCGALPAWRSAHAPAAEVL KAESASISGGSRNRKLLSGLVVAQIALSLPLLLCSGLFLRTLRNLAHANPGFEQDHILTATVGLNIAGYSHDEEQLIRHK ILDRVSALPGVKAASFTDWIPMTLGHKGEDAYPEGYVPHPHESLQVYHAEVAPRYFESLHIPILEGREFTPDDDEKAPRV LIVDQTAARRYWPGQDPLGKRLRIWGRLFTVVGLAKNSTHMLMNESPEPMVYMSFFQEGYETIVQVKTEGNPADFAPAVE NAIHEIDPRLPVFDVRPMRESTQLASSFAVIESALAGMFAMIGLVLAATGIYGVVAYRTQMRTHEIGIRMALGASRVNVL RLVLSQGLWLTAIGLTLGLAFAMGLTRFIARLLYGIGANDPVTVVSVVMLLGAMSLLACYLPAHRAMRRNPVTAIREL
Sequences:
NA
Specific function: NA
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA