Definition Candidatus Koribacter versatilis Ellin345, complete genome.
Accession NC_008009
Length 5,650,368

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 94967449

GI number:

Start: 484250

End: 486673

Strand: Reverse

Name: Not Available

Synonym: Acid345_0418

Alternate gene names: NA

Gene position: NA

Preceding gene: 94967450

Following gene: 94967448

Centisome position: NA

GC content: NA

Gene sequence:

>2424_bases
ATGCTTGCGCAGGAGATTCGTCACGGAGTTCGAATCCTACAACGCAGTCCTGGTTTCGCATTCGCGACCGTTCTTACGCT
AAGCATCTGCATCGGCGTAAACATTGCGATGTTCTGGATCGTGGATGGCGTTCTGCTGCGTCCGCTGCCTTATCGCGAGT
CAGACCGCTTGGTAAACATTACGACCGGTAGCCCTGAACGGCAGATCACGGGAATTCCCACTTCGTGGACCAAGTTCCAG
CGCATGCAGCAAGAGTCGAAGCTCCTCGAGAGCGTCGGCGCCTATTTCCCCACTACTTTGAGCATCAGCACGAACGGTGT
TCCTGAGGAATTGCCTGCTGCGCATGCGACGGCAAGTTTGTTCCAAGCACTCGATGTAACTCCGGCGATGGGCCGCTCGT
TTCTTCCGCAGGAAGAACGTGAAGGCGGTGCACAGGTCGCAATAATCAGCGATCACTTCTGGCGGACCCGCTTCAATGCA
TCAAGCGACATCCTCGGGAAAACGATCTCTCTCGACGGCCGTAGCGTCGAAGTAATTGGCGTTCTCCCTCGCAGGTTTCA
ATTTCCATTTGTGCAACCTGCGCCCGAGGTTTGGGTCCCACGGGTCTTCGAGTATCCAACCGTTGCTCCGGCCCGGGTCC
GCTCGGGCGCCGCGTTCCTCAGCGTACATGGCCGGCTGAAATCAGGCGCGACGATAAAGCAGCTGCAATCTGAACTCAGC
ACTCTCGCGCGCGCTTATGAGGCGGACAATCCCGGCTTCGCAGATGGGCGTGGCTTTACTCTGGAAGTCGTCGCACTCAA
GGAAAGCGTCGTTGGGCAGATCCGCTCTACGCTTCTAACGCTGCTCATCGCCGTCGGATTCCTCTGGCTTGTCGGCTGCT
CGAACATCGCGGGCCTGCTTGTTGCTCGTGCCACTACGAGACGAAAAGAGATTGCGATTCGGCAGGCGATCGGAGCGTCG
CGCTCGCGGATTGCCACGCAGCTCGTCGCGGAGAGTCTGGTGCTCTCCTATCTCGCCGGTATTTTTGGCGTGGTCATCGC
GCTTGCCTGCGGCAAGGGTTTGCGAATGTTGCCGCCAGGGACGCTGCCTCGGGTGGAAGAGCTTGGGCTTGATCCCACCG
TCGTCCTGTTCGCAATTCTTTTAAGCACATTCGCAACCGTCGTTATAGGCATCATCCCTGCTGTGCAGATATACCGGCCC
GACATCTACACACCGCTAAAAGAGGGAGGCCGCACCGCAAATACCGGCCAAAAGGGAAGCCGCTCACGCTTGGTGCTGGT
TGTTGGTGAAGTCGCTGCAGCCATGGTTCTCCTCGCGGGAGCGGGAATGCTCATCAAGAGCTTCGCCAACCTTGCTCGCG
TGCATCCCGGCTTCGACCCGCAGAACGTGATGACTTTCACCATCAACCTTCCCACCTCGCACTACAACACGCCGGAAAAG
CAGAGAGAGTTTTACCGCGCACTTCTCGAAGAGGCGCGTGCGATTCCCGGCGTCGATGCTGCCGGCGTCATCAGCGCATT
GCCTATCGGTGGCTTTGGCTTCAGCGTGTATGTGTGTCCCGAAGGGACCGTATGCCAGGGCATCGGCAAAGATCCGGTAA
TTGCCTATCGCATGGTGAGTCCCGCCTATGTGAAAACCTTGCGCATCCCACTGCTCGCTGGACGCGATTTCACGGACCAC
GACAACCTCAACGGATCACTGGTCACGATCATCAACCAATCCACTGCGAAAAAGTATTTTCCGAACGTCGACCCCATCGG
CCGTCATTTGGTTCCTTCCCGTGAGCGAATCCCGCTCGAAATCGTGGGAGTCATCGGCGATGTGCGGGCAAATGGTTTGG
GAGCACCCGTAAGCGAGGAGTTTTATGTCCCAGCCGCGCAGGCATCCGCGGCGACCATGACTCTCGTCCTGCGGTCTCAC
ACCAACTTGTCCGCATTCGCCCCGCCGGTTCGTCGCATCATGGCAAAGCTCGACCCCGATGTCCCTTTCGCGAATGTTGC
GACGATGAACCAGGTGATCTCCGACTCTGTAACCCAATCTCGCCTTACCGCAATACTGACTGGCGCATTCGCTTCGATCG
CTCTCTTCCTCACCAGCGTCGGCATTTACGGAGTGATCGCTTACTGGGTGGCCGAGCGTTCCTACGAAATTGGGCTAAGG
CTCGCGGTGGGCGCGATGCGCAAGGACATTCTCACTCTGGTTCTAAAGCAAGGTATGAGCCTGGTTGCTATCGGCTTGGT
GATTGGCTTAGCAGGATCCCTTCTGTTATCTCGATTCCTCAAAGAGATCCTTTTCGGCATCGGAACCTTCGACCCACGCA
CATTGATCGAGACGGTCGTGATCTTAAGCGCGGTCGCCGTCCTGGCAGTTTTGATTCCGGCTCGCCGTGCACTTTCAGTT
GATCCCATTATTGTGCTGCGTTAA

Upstream 100 bases:

>100_bases
TCAACTTGCACTCGAAACTCCGGATTCCATCCCATGGTGCGCTGGGGAATGCTTGCTGAACCGCCTAATACTTGATCTTG
ACGCGATCGGAGAATAAGCA

Downstream 100 bases:

>100_bases
CCCAAGGACGAACCGATTCGTCCCGCGATTTCGCGTTCGTCCCTCGTCAAATTCATTGGTCCCGACCATCGGCGACTCCA
TTCGGTCGCGGCTTTCATCG

Product: ABC efflux pump, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>807_residues
MLAQEIRHGVRILQRSPGFAFATVLTLSICIGVNIAMFWIVDGVLLRPLPYRESDRLVNITTGSPERQITGIPTSWTKFQ
RMQQESKLLESVGAYFPTTLSISTNGVPEELPAAHATASLFQALDVTPAMGRSFLPQEEREGGAQVAIISDHFWRTRFNA
SSDILGKTISLDGRSVEVIGVLPRRFQFPFVQPAPEVWVPRVFEYPTVAPARVRSGAAFLSVHGRLKSGATIKQLQSELS
TLARAYEADNPGFADGRGFTLEVVALKESVVGQIRSTLLTLLIAVGFLWLVGCSNIAGLLVARATTRRKEIAIRQAIGAS
RSRIATQLVAESLVLSYLAGIFGVVIALACGKGLRMLPPGTLPRVEELGLDPTVVLFAILLSTFATVVIGIIPAVQIYRP
DIYTPLKEGGRTANTGQKGSRSRLVLVVGEVAAAMVLLAGAGMLIKSFANLARVHPGFDPQNVMTFTINLPTSHYNTPEK
QREFYRALLEEARAIPGVDAAGVISALPIGGFGFSVYVCPEGTVCQGIGKDPVIAYRMVSPAYVKTLRIPLLAGRDFTDH
DNLNGSLVTIINQSTAKKYFPNVDPIGRHLVPSRERIPLEIVGVIGDVRANGLGAPVSEEFYVPAAQASAATMTLVLRSH
TNLSAFAPPVRRIMAKLDPDVPFANVATMNQVISDSVTQSRLTAILTGAFASIALFLTSVGIYGVIAYWVAERSYEIGLR
LAVGAMRKDILTLVLKQGMSLVAIGLVIGLAGSLLLSRFLKEILFGIGTFDPRTLIETVVILSAVAVLAVLIPARRALSV
DPIIVLR

Sequences:
NA

Specific function: NA

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA