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The map label for this gene is dedA [C]

Identifier: 94314857

GI number: 94314857

Start: 143940

End: 144914

Strand: Reverse

Name: dedA [C]

Synonym: Rmet_5938

Alternate gene names: 94314857

Gene position: 144914-143940 (Counterclockwise)

Preceding gene: 94314858

Following gene: 94314856

Centisome position: 5.62

GC content: 65.03

Gene sequence:

>975_bases
GTGGGTGATTTACAGAGCTTGCTCGATGGTCACGGGCTGATGCTCGTGTTTCTCAATGTACTGGCCGAACAGGCCGGGCT
GCCGATTCCTGCCTACCCCATGCTGTTCGTGGCGGGCGCATTGTCGATGCAACCGAACGGCCCCTCGATCGGCACGGTAC
TGTTCGCCGTGATTGCCGCCTGTCTGATCGCCGACACCGCCTGGTACTTCGCCGGAAAGCGGCTGGGTCAGCCAATGCTG
CGCACGATCTGCCGCGTCTCGATCTCACCGGACACCTGCATCCGGCAGACCCAGTCGCTATACCTGCGCGTGGGCCCCCG
GTCGCTGATCTTCGCCAAGCTGCTGCCTGGCGCCGGCGCGCTCTCCACGTCGATGGCCGGCATGACCGCCACGCCGTTCC
TGACCTTCATCTTCTATGACGCGCTCGGCGCACTGGTATGGGCGGGCGCCGCACTGGTCGCCGGCATGGTCTTCAGCGAT
TTCGTCGATACGATCCTGGCCGCCTTCAGCGCCTTCGGCCATATCGCCCTCATGGTGGTGCTCGGCGCATTCGCGCTGTT
CATCGCCTGGCGATTCTGGATGCGCTGGCGCCTGCTGCGCCGGTCCGGCCTGATTCCGCGCATGACGGTCATGGAATTCG
AGCAGCGCCGGGCGGCAGGAGACAAGCCGGTCGTCGTCATCGATGTGCGCGCCCATGGCGCCGCCCCCATCGAGCGCATT
CCCGGCTCGATCGTGATGGAAATCAAGGGCCCCTTCGACACGTTGTCCGGCCATGACGCCAGTTCCGACTTCGTGGTTTA
TTGCGCATGTCCACACGAGATGTCGGCTGCCGTCCTGGCCGAACGCCTGCGCACGGCCGGGTATCCGAACACTTGGGCGC
TGGCCGGGGGATTCGACGAATGGAAGCGGCTGCAAGGCACTTCAGGCCTGCCAACCGCCACGCCAGACGCGCCACAGCAG
ATCATCGCGCACTAG

Upstream 100 bases:

>100_bases
AGTGCCCTGACACGCTGGCAAACTGTGAACCTGCTCCGGCCGCGCCCCCAAGTCATGTCTGCCGCCGGGAGCCTCAACAG
TTTAGGCGGGAGACCTTGTC

Downstream 100 bases:

>100_bases
ACCCGGCGCCGGAGGCTCCACGCCGCCCTTTCGGTTCCCCTGTCGCTTCCTATACTTGGCCCAAGCCGTTTGTGCACGGA
GGGTGACATGCCGGGCGAAG

Product: putative integral-membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MGDLQSLLDGHGLMLVFLNVLAEQAGLPIPAYPMLFVAGALSMQPNGPSIGTVLFAVIAACLIADTAWYFAGKRLGQPML
RTICRVSISPDTCIRQTQSLYLRVGPRSLIFAKLLPGAGALSTSMAGMTATPFLTFIFYDALGALVWAGAALVAGMVFSD
FVDTILAAFSAFGHIALMVVLGAFALFIAWRFWMRWRLLRRSGLIPRMTVMEFEQRRAAGDKPVVVIDVRAHGAAPIERI
PGSIVMEIKGPFDTLSGHDASSDFVVYCACPHEMSAAVLAERLRTAGYPNTWALAGGFDEWKRLQGTSGLPTATPDAPQQ
IIAH

Sequences:

>Translated_324_residues
MGDLQSLLDGHGLMLVFLNVLAEQAGLPIPAYPMLFVAGALSMQPNGPSIGTVLFAVIAACLIADTAWYFAGKRLGQPML
RTICRVSISPDTCIRQTQSLYLRVGPRSLIFAKLLPGAGALSTSMAGMTATPFLTFIFYDALGALVWAGAALVAGMVFSD
FVDTILAAFSAFGHIALMVVLGAFALFIAWRFWMRWRLLRRSGLIPRMTVMEFEQRRAAGDKPVVVIDVRAHGAAPIERI
PGSIVMEIKGPFDTLSGHDASSDFVVYCACPHEMSAAVLAERLRTAGYPNTWALAGGFDEWKRLQGTSGLPTATPDAPQQ
IIAH
>Mature_323_residues
GDLQSLLDGHGLMLVFLNVLAEQAGLPIPAYPMLFVAGALSMQPNGPSIGTVLFAVIAACLIADTAWYFAGKRLGQPMLR
TICRVSISPDTCIRQTQSLYLRVGPRSLIFAKLLPGAGALSTSMAGMTATPFLTFIFYDALGALVWAGAALVAGMVFSDF
VDTILAAFSAFGHIALMVVLGAFALFIAWRFWMRWRLLRRSGLIPRMTVMEFEQRRAAGDKPVVVIDVRAHGAAPIERIP
GSIVMEIKGPFDTLSGHDASSDFVVYCACPHEMSAAVLAERLRTAGYPNTWALAGGFDEWKRLQGTSGLPTATPDAPQQI
IAH

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 34861; Mature: 34730

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDLQSLLDGHGLMLVFLNVLAEQAGLPIPAYPMLFVAGALSMQPNGPSIGTVLFAVIAA
CCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
CLIADTAWYFAGKRLGQPMLRTICRVSISPDTCIRQTQSLYLRVGPRSLIFAKLLPGAGA
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHEEEECCHHHHHHHHCCCCCH
LSTSMAGMTATPFLTFIFYDALGALVWAGAALVAGMVFSDFVDTILAAFSAFGHIALMVV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAFALFIAWRFWMRWRLLRRSGLIPRMTVMEFEQRRAAGDKPVVVIDVRAHGAAPIERI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHC
PGSIVMEIKGPFDTLSGHDASSDFVVYCACPHEMSAAVLAERLRTAGYPNTWALAGGFDE
CCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCHHH
WKRLQGTSGLPTATPDAPQQIIAH
HHHHCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
GDLQSLLDGHGLMLVFLNVLAEQAGLPIPAYPMLFVAGALSMQPNGPSIGTVLFAVIAA
CCHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
CLIADTAWYFAGKRLGQPMLRTICRVSISPDTCIRQTQSLYLRVGPRSLIFAKLLPGAGA
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHEEEECCHHHHHHHHCCCCCH
LSTSMAGMTATPFLTFIFYDALGALVWAGAALVAGMVFSDFVDTILAAFSAFGHIALMVV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAFALFIAWRFWMRWRLLRRSGLIPRMTVMEFEQRRAAGDKPVVVIDVRAHGAAPIERI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHC
PGSIVMEIKGPFDTLSGHDASSDFVVYCACPHEMSAAVLAERLRTAGYPNTWALAGGFDE
CCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCHHH
WKRLQGTSGLPTATPDAPQQIIAH
HHHHCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]