| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314820
Identifier: 94314820
GI number: 94314820
Start: 101090
End: 102184
Strand: Reverse
Name: 94314820
Synonym: Rmet_5901
Alternate gene names: NA
Gene position: 102184-101090 (Counterclockwise)
Preceding gene: 94314823
Following gene: 94314818
Centisome position: 3.96
GC content: 64.11
Gene sequence:
>1095_bases ATGCCGCAGTTGGACAACGAATTGGACACCGAACAGACCGAAGACCGCGCCGGAACCGGCAGCACCGAACAGCCTGACCA AACCCGGCCCCTGACTCCCGCCGCCTGGTTCAGCGTCAAGACCGTGTCGTACGTGTTGACCGCCGGGGCCCTGCTGCTGG TGATGCACGCCAACCTGGTGTCCGCCCTGCTCGCCGGCCTGCTGCTCTACTCTCTGGTGGATGTGCTGGCGCCACGGCTG ATGCGACTGCATTCGCGCCGCGACGCCATCGCCGTGGCGATCCTGTCCACCATCATCCTGCTGGTGCTGACCGGCAGCAT CTGGGCGCTCATCCGTTTTATCAGCGGCGACGGCAATACGCTGGACCGGCTGCTCGACCATTCCGCCGACATCATCGACC GCTCTCGCGCCCAGTTGCCAGCCTGGCTGAGCGACTACCTGCCCAACGGGGTCGACGAACTCGCCACGACCCTGATCTCG GCATTGCGCGAGCACGCGCAGATGGCGCAGCGGCTCGGCGCCGATATCCTGCGCACGCTGGTCCATATCCTCGTCGGCCT CATCATCGGCGCGATGATCGCGCTGTACCGCGCCATTTCCCGCCCGAATCGTCGCCCGCTAGCCCTGGCCCTGGTGGACC GGGCCCGCACGCTGCAGACTGCGTTCTCGCAGTTCATCTTCGCGCAGATCCAGATCTCGCTCGTCAACACAATCCTGACC GCGATCTACCTGCTGGTGCTGCTGCCCCTGTTCCACCAGCACCTGCCGCTCTCCAAGACGCTGGTGGCCATCACGTTTAT CGCCGGACTGCTGCCGGTGCTGGGCAACCTGATCTCGAATACGGCCATTGTCATCGCCTCGCTTTCGGTCTCGCTGCCGA TCGCGGTGGTGTCGCTGCTGTTCCTGGTGTTGATCCACAAGCTCGAGTACTTCCTCAACGCGCGAATCATCGGCGCGCGT ATACACGCCGCCGCATGGGAACTGCTGACAGTGATGCTGGTGATGGAAACGCTCTACGGCATCCCCGGCGTGATCGCGGG ACCGATCTTCTATGCCTACGTAAAGCGCGAACTGAGCACGGCCGGGCTTGTGTAG
Upstream 100 bases:
>100_bases TGTCTCGTCATCCTGTCTTGCCATTGTTACGCCCGGCATCGACAATCGTGGCGATTGCTTCCTTGCTTCATTTCCGCAAC GCCCCGCTCTCAGCCGAGAT
Downstream 100 bases:
>100_bases GCGCTCAGCCAAGTGCTTGATTTCATTGCTTTGTCGTACGCAGAAATTGGTACGACCAATATGCGGGAAGACTAGTCGAC CTTGCTCCGCACGAAGTCGA
Product: putative permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MPQLDNELDTEQTEDRAGTGSTEQPDQTRPLTPAAWFSVKTVSYVLTAGALLLVMHANLVSALLAGLLLYSLVDVLAPRL MRLHSRRDAIAVAILSTIILLVLTGSIWALIRFISGDGNTLDRLLDHSADIIDRSRAQLPAWLSDYLPNGVDELATTLIS ALREHAQMAQRLGADILRTLVHILVGLIIGAMIALYRAISRPNRRPLALALVDRARTLQTAFSQFIFAQIQISLVNTILT AIYLLVLLPLFHQHLPLSKTLVAITFIAGLLPVLGNLISNTAIVIASLSVSLPIAVVSLLFLVLIHKLEYFLNARIIGAR IHAAAWELLTVMLVMETLYGIPGVIAGPIFYAYVKRELSTAGLV
Sequences:
>Translated_364_residues MPQLDNELDTEQTEDRAGTGSTEQPDQTRPLTPAAWFSVKTVSYVLTAGALLLVMHANLVSALLAGLLLYSLVDVLAPRL MRLHSRRDAIAVAILSTIILLVLTGSIWALIRFISGDGNTLDRLLDHSADIIDRSRAQLPAWLSDYLPNGVDELATTLIS ALREHAQMAQRLGADILRTLVHILVGLIIGAMIALYRAISRPNRRPLALALVDRARTLQTAFSQFIFAQIQISLVNTILT AIYLLVLLPLFHQHLPLSKTLVAITFIAGLLPVLGNLISNTAIVIASLSVSLPIAVVSLLFLVLIHKLEYFLNARIIGAR IHAAAWELLTVMLVMETLYGIPGVIAGPIFYAYVKRELSTAGLV >Mature_363_residues PQLDNELDTEQTEDRAGTGSTEQPDQTRPLTPAAWFSVKTVSYVLTAGALLLVMHANLVSALLAGLLLYSLVDVLAPRLM RLHSRRDAIAVAILSTIILLVLTGSIWALIRFISGDGNTLDRLLDHSADIIDRSRAQLPAWLSDYLPNGVDELATTLISA LREHAQMAQRLGADILRTLVHILVGLIIGAMIALYRAISRPNRRPLALALVDRARTLQTAFSQFIFAQIQISLVNTILTA IYLLVLLPLFHQHLPLSKTLVAITFIAGLLPVLGNLISNTAIVIASLSVSLPIAVVSLLFLVLIHKLEYFLNARIIGARI HAAAWELLTVMLVMETLYGIPGVIAGPIFYAYVKRELSTAGLV
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39689; Mature: 39558
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLDNELDTEQTEDRAGTGSTEQPDQTRPLTPAAWFSVKTVSYVLTAGALLLVMHANLV CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALLAGLLLYSLVDVLAPRLMRLHSRRDAIAVAILSTIILLVLTGSIWALIRFISGDGNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LDRLLDHSADIIDRSRAQLPAWLSDYLPNGVDELATTLISALREHAQMAQRLGADILRTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHILVGLIIGAMIALYRAISRPNRRPLALALVDRARTLQTAFSQFIFAQIQISLVNTILT HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIYLLVLLPLFHQHLPLSKTLVAITFIAGLLPVLGNLISNTAIVIASLSVSLPIAVVSLL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVLIHKLEYFLNARIIGARIHAAAWELLTVMLVMETLYGIPGVIAGPIFYAYVKRELST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AGLV CCCC >Mature Secondary Structure PQLDNELDTEQTEDRAGTGSTEQPDQTRPLTPAAWFSVKTVSYVLTAGALLLVMHANLV CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALLAGLLLYSLVDVLAPRLMRLHSRRDAIAVAILSTIILLVLTGSIWALIRFISGDGNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LDRLLDHSADIIDRSRAQLPAWLSDYLPNGVDELATTLISALREHAQMAQRLGADILRTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHILVGLIIGAMIALYRAISRPNRRPLALALVDRARTLQTAFSQFIFAQIQISLVNTILT HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIYLLVLLPLFHQHLPLSKTLVAITFIAGLLPVLGNLISNTAIVIASLSVSLPIAVVSLL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVLIHKLEYFLNARIIGARIHAAAWELLTVMLVMETLYGIPGVIAGPIFYAYVKRELST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AGLV CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA