| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314799
Identifier: 94314799
GI number: 94314799
Start: 76579
End: 77979
Strand: Direct
Name: 94314799
Synonym: Rmet_5880
Alternate gene names: NA
Gene position: 76579-77979 (Clockwise)
Preceding gene: 94314797
Following gene: 94314800
Centisome position: 2.97
GC content: 67.95
Gene sequence:
>1401_bases ATGGGTTCGCCGTCCTTTTCTTCGAGTTTCGGAAACGCCATGACTGTCCCCTTGCTGATCGGCTCCGGCGCCGGATTTTC CGGTGACCGCACCGACGCCGCCCTGCCAGTGGTGCGCACGCTGATTGCCGCGGGCGGACCTGCCGCGCTGATCTTCGAAA CGCTGGCCGAACGCACGTTGGCACTTGCGCAACTGGCACGTCGCGACGATCCCGAGCATGGCTACGAACCTCTGCTGGAC CAGCTCCTGACGCCGGTCCTCGGTTTGTGCCTGGTCAACGACATTCCGATCGTCGGCAACTTCGGCGCGGCCAATCCGCG TGCGGCGGCCCGCCGTATCGGCGAGCTGGCGGTGGAGTTGGGTCTGCCGGTGCCGCGTGTGGCCGTCGTGGAGGGTGATG ACCTGTCGCACGACGAAGGTCGGGCGCTGCTGCGCGGTATCGTCGGCGACACTTTCCCGGAGGCGCGTTTCGTCTGCGCC AACGCCTACATCGGCGCGCAGGGCATTGCTGATGCGCTGCGCGACGGCGCGCAGGTGGTGGTGTGCGGCCGCGTGGCCGA TCCCGCGCTGGCCGTGGGTCCGGCGATGGCGCACTTCGGCTGGGCCTGGGATGACTGGAATCGCCTGGCTGCTGCGACGA TGGCCGGCCATCTGCTCGAATGCGGCGCGCAGGTCAGCGGCGGCTATTTTGCCGATCCGGGCATGAAGGACGTGCCCGAT GTACACGCCGTCGGTTTTCCGATCGCACGGCTCGATGCCGATGGTGGCATCGAGATCTTCAAGGCGGCTGGCACCGGCGG CTGCGTGGACCTGCGCACCGTGAAGGAACAACTTCTGTACGAGGTGCACGACCCCTGCGCCTACCTGACCCCCGACGTGG TCGCCGATATCGGCGAGGTGACGGTCGCGCAGGTCGGTCCGGATCGCGTAGCTGTCCGCAATATCCGAGGCCATGCGCGT CCGGACACGCTCAAGGTCAACCTGTTCTACCAGGGCGGGTGGATTGCCGAGGGCGAGATCTCGTATGCAGGCCCCAATGC GGCGGCGCGTGCGCGACTGGCTGCCGACATCCTTGGCAAACGCATGAAGGGGCTCGGTTTCGACGTGCCAATCCGCTTCG ACCTGATCGGCGTCCTGAGCGTGTTTGCCGATGACGCCGGCGAGATGCTGGCGCGGCCGCAGCCGCATGAGGCCGAGGCG CGCGATGTGCGCCTGCGCGCGGCGCTGGCGCACGAGGACAAGGCGGTGGCCCAGGCGCTGCTGCGCGAGGTCAATGCGCT CTACACATGCGGCCCCGCGGGCGGTGGTGGCGTGCGCACGGCATTGCGTGCGCGCCTTAACGCGATGTCGTGTCTGGCGC CACGCTCCGCCGTGGCGCCGCGCCATACCCTGTTGTCCTGA
Upstream 100 bases:
>100_bases ACAGGTTCGACAGCATGGTTCGGGTAGTGGAGATTTATCGGCATTATCGATAGATTAATCCAAATCATCCGTTTGTTAGT GAGAGCCTGCGAGACCTAGA
Downstream 100 bases:
>100_bases CCGGAGCCTGCCATGACCGTAACCACAAAGCTCTACCGGTTTGCTCACGGCCGCACCGGCGACAAGGGCGACCGCTCCAA CATCAGCGTGATTGCCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MGSPSFSSSFGNAMTVPLLIGSGAGFSGDRTDAALPVVRTLIAAGGPAALIFETLAERTLALAQLARRDDPEHGYEPLLD QLLTPVLGLCLVNDIPIVGNFGAANPRAAARRIGELAVELGLPVPRVAVVEGDDLSHDEGRALLRGIVGDTFPEARFVCA NAYIGAQGIADALRDGAQVVVCGRVADPALAVGPAMAHFGWAWDDWNRLAAATMAGHLLECGAQVSGGYFADPGMKDVPD VHAVGFPIARLDADGGIEIFKAAGTGGCVDLRTVKEQLLYEVHDPCAYLTPDVVADIGEVTVAQVGPDRVAVRNIRGHAR PDTLKVNLFYQGGWIAEGEISYAGPNAAARARLAADILGKRMKGLGFDVPIRFDLIGVLSVFADDAGEMLARPQPHEAEA RDVRLRAALAHEDKAVAQALLREVNALYTCGPAGGGGVRTALRARLNAMSCLAPRSAVAPRHTLLS
Sequences:
>Translated_466_residues MGSPSFSSSFGNAMTVPLLIGSGAGFSGDRTDAALPVVRTLIAAGGPAALIFETLAERTLALAQLARRDDPEHGYEPLLD QLLTPVLGLCLVNDIPIVGNFGAANPRAAARRIGELAVELGLPVPRVAVVEGDDLSHDEGRALLRGIVGDTFPEARFVCA NAYIGAQGIADALRDGAQVVVCGRVADPALAVGPAMAHFGWAWDDWNRLAAATMAGHLLECGAQVSGGYFADPGMKDVPD VHAVGFPIARLDADGGIEIFKAAGTGGCVDLRTVKEQLLYEVHDPCAYLTPDVVADIGEVTVAQVGPDRVAVRNIRGHAR PDTLKVNLFYQGGWIAEGEISYAGPNAAARARLAADILGKRMKGLGFDVPIRFDLIGVLSVFADDAGEMLARPQPHEAEA RDVRLRAALAHEDKAVAQALLREVNALYTCGPAGGGGVRTALRARLNAMSCLAPRSAVAPRHTLLS >Mature_465_residues GSPSFSSSFGNAMTVPLLIGSGAGFSGDRTDAALPVVRTLIAAGGPAALIFETLAERTLALAQLARRDDPEHGYEPLLDQ LLTPVLGLCLVNDIPIVGNFGAANPRAAARRIGELAVELGLPVPRVAVVEGDDLSHDEGRALLRGIVGDTFPEARFVCAN AYIGAQGIADALRDGAQVVVCGRVADPALAVGPAMAHFGWAWDDWNRLAAATMAGHLLECGAQVSGGYFADPGMKDVPDV HAVGFPIARLDADGGIEIFKAAGTGGCVDLRTVKEQLLYEVHDPCAYLTPDVVADIGEVTVAQVGPDRVAVRNIRGHARP DTLKVNLFYQGGWIAEGEISYAGPNAAARARLAADILGKRMKGLGFDVPIRFDLIGVLSVFADDAGEMLARPQPHEAEAR DVRLRAALAHEDKAVAQALLREVNALYTCGPAGGGGVRTALRARLNAMSCLAPRSAVAPRHTLLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48729; Mature: 48598
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSPSFSSSFGNAMTVPLLIGSGAGFSGDRTDAALPVVRTLIAAGGPAALIFETLAERTL CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALAQLARRDDPEHGYEPLLDQLLTPVLGLCLVNDIPIVGNFGAANPRAAARRIGELAVEL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHH GLPVPRVAVVEGDDLSHDEGRALLRGIVGDTFPEARFVCANAYIGAQGIADALRDGAQVV CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEE VCGRVADPALAVGPAMAHFGWAWDDWNRLAAATMAGHLLECGAQVSGGYFADPGMKDVPD EEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCC VHAVGFPIARLDADGGIEIFKAAGTGGCVDLRTVKEQLLYEVHDPCAYLTPDVVADIGEV CHHCCCCCEEECCCCCEEEEEECCCCCEEHHHHHHHHHHHHHCCCHHHCCHHHHHHHCCE TVAQVGPDRVAVRNIRGHARPDTLKVNLFYQGGWIAEGEISYAGPNAAARARLAADILGK EEEECCCCHHHHHHCCCCCCCCEEEEEEEECCCEEECCEEEECCCCHHHHHHHHHHHHHH RMKGLGFDVPIRFDLIGVLSVFADDAGEMLARPQPHEAEARDVRLRAALAHEDKAVAQAL HHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LREVNALYTCGPAGGGGVRTALRARLNAMSCLAPRSAVAPRHTLLS HHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCHHHCC >Mature Secondary Structure GSPSFSSSFGNAMTVPLLIGSGAGFSGDRTDAALPVVRTLIAAGGPAALIFETLAERTL CCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALAQLARRDDPEHGYEPLLDQLLTPVLGLCLVNDIPIVGNFGAANPRAAARRIGELAVEL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHH GLPVPRVAVVEGDDLSHDEGRALLRGIVGDTFPEARFVCANAYIGAQGIADALRDGAQVV CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEE VCGRVADPALAVGPAMAHFGWAWDDWNRLAAATMAGHLLECGAQVSGGYFADPGMKDVPD EEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCC VHAVGFPIARLDADGGIEIFKAAGTGGCVDLRTVKEQLLYEVHDPCAYLTPDVVADIGEV CHHCCCCCEEECCCCCEEEEEECCCCCEEHHHHHHHHHHHHHCCCHHHCCHHHHHHHCCE TVAQVGPDRVAVRNIRGHARPDTLKVNLFYQGGWIAEGEISYAGPNAAARARLAADILGK EEEECCCCHHHHHHCCCCCCCCEEEEEEEECCCEEECCEEEECCCCHHHHHHHHHHHHHH RMKGLGFDVPIRFDLIGVLSVFADDAGEMLARPQPHEAEARDVRLRAALAHEDKAVAQAL HHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LREVNALYTCGPAGGGGVRTALRARLNAMSCLAPRSAVAPRHTLLS HHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA