| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94314757
Identifier: 94314757
GI number: 94314757
Start: 25721
End: 26686
Strand: Direct
Name: 94314757
Synonym: Rmet_5838
Alternate gene names: NA
Gene position: 25721-26686 (Clockwise)
Preceding gene: 94314756
Following gene: 94314758
Centisome position: 1.0
GC content: 64.8
Gene sequence:
>966_bases ATGGATGCACACACTCTTACCGAGGCACGTCCGGCAGGTGGCGCGGACCCAATGGCCGCGCAACCGCCAACGTTCCTCGA ATCGCTGCTGGCAGCGGGGCTGCTGATCCAGACTGGCGTGCGTGGCCTCTACGGCCGCAGTGCCGTGTTCGAAGGCATCG CCGACGGCCTGAATGCCGCGTTCACGCGGATCGGCGCGGACCAGAACGCCGAAGTGCTGCGCTTCCCGCCAGCGATCGGC AAGGATGATTTCGAAACCAGCGAGTACCTCAAGAGCTTTCCGCAGCTTGCCGGCACGATCCACAGCTTCTGCGGCGACGA TCGCGGGCATCGACAACTGCTGGCGCGGCTCGAGGACAAGCAGGACTGGACCGATCAGCAGCAGTTCACGGGCGTGGTGA TGACGCCCGCCGCCTGCTACCCGATCTATCCCGTCATCGGCAAGCGCGGCCCGCTGCCCGCCGAGGGCAAGATCGTCGAC GTGATGTCGTACTGCTATCGGCACGAACCGTCGCTGGAGCCTACCCGGATGCAGTTATTCCGGCAGCGCGAGTACGTTTG CCTGGGGTCCCCCGAGCGGATCGTGGCGTTCCGCGAGTTGTGGATGGAGCGTGGGCTGGCGTTCGGTCGGGCCCTGCAGC TTCCGGTGGAAGTCGACGTGGCCAATGACCCGTTCTTCGGGCGCGGCGGCAAGATCGTGGCCGACAGCCAGCGCGAGCTG AAACTCAAGTTCGAACTGCTGATCCCGGTGAACGACGGCGCGCCGCCGACGGCCTGCATGAGCTTCAATTACCACATGGA TCACTTCGGCGCGCTCTGGCATATCGGACTGCACGACGGTGGCGTCGCCCACACGGGTTGCGTCGGTTTCGGTATCGAAC GGCTGGTGCTGGCGCTCCTGAAGCACCATGGACTTGACCCAGCCAGGTGGCCTCAGGCAGTAAGGGAAACGCTGGGAGGC ATCTAA
Upstream 100 bases:
>100_bases TGCGCGATCTGTGGTCGGCGCCGCTGATGATCAACAACGATCGCATTCAGACCAATACAGCGAACCTGCTGCTGGCCGAT CGTTCCTGAAGGAGGCATCC
Downstream 100 bases:
>100_bases ATGTACGGTGATGGCAAGGTGCGCACGCGCGGCGGAGCCTATGCGCTGCACGGGGGTAACCCCGTGTGGTCGCATGCCAA CCGCCACATCGATCTCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Amino acid:[carrier-protein] ligase [AMP forming]; aa:CP ligase; Aminoacyl-[acyl-carrier-protein] synthetase; L-alanine:[acyl-carrier-protein] ligase; L-glycine:[acyl-carrier-protein] ligase; L-serine:[acyl-carrier-protein] ligase [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MDAHTLTEARPAGGADPMAAQPPTFLESLLAAGLLIQTGVRGLYGRSAVFEGIADGLNAAFTRIGADQNAEVLRFPPAIG KDDFETSEYLKSFPQLAGTIHSFCGDDRGHRQLLARLEDKQDWTDQQQFTGVVMTPAACYPIYPVIGKRGPLPAEGKIVD VMSYCYRHEPSLEPTRMQLFRQREYVCLGSPERIVAFRELWMERGLAFGRALQLPVEVDVANDPFFGRGGKIVADSQREL KLKFELLIPVNDGAPPTACMSFNYHMDHFGALWHIGLHDGGVAHTGCVGFGIERLVLALLKHHGLDPARWPQAVRETLGG I
Sequences:
>Translated_321_residues MDAHTLTEARPAGGADPMAAQPPTFLESLLAAGLLIQTGVRGLYGRSAVFEGIADGLNAAFTRIGADQNAEVLRFPPAIG KDDFETSEYLKSFPQLAGTIHSFCGDDRGHRQLLARLEDKQDWTDQQQFTGVVMTPAACYPIYPVIGKRGPLPAEGKIVD VMSYCYRHEPSLEPTRMQLFRQREYVCLGSPERIVAFRELWMERGLAFGRALQLPVEVDVANDPFFGRGGKIVADSQREL KLKFELLIPVNDGAPPTACMSFNYHMDHFGALWHIGLHDGGVAHTGCVGFGIERLVLALLKHHGLDPARWPQAVRETLGG I >Mature_321_residues MDAHTLTEARPAGGADPMAAQPPTFLESLLAAGLLIQTGVRGLYGRSAVFEGIADGLNAAFTRIGADQNAEVLRFPPAIG KDDFETSEYLKSFPQLAGTIHSFCGDDRGHRQLLARLEDKQDWTDQQQFTGVVMTPAACYPIYPVIGKRGPLPAEGKIVD VMSYCYRHEPSLEPTRMQLFRQREYVCLGSPERIVAFRELWMERGLAFGRALQLPVEVDVANDPFFGRGGKIVADSQREL KLKFELLIPVNDGAPPTACMSFNYHMDHFGALWHIGLHDGGVAHTGCVGFGIERLVLALLKHHGLDPARWPQAVRETLGG I
Specific function: Catalyzes the ATP-dependent activation of L-alanine, and to a lesser extent of L-glycine and L-serine, and their transfer to the phosphopantetheine prosthetic group covalently attached to the vicinal carrier protein Atu2571 of yet unknown function. May pa
COG id: COG0172
COG function: function code J; Seryl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. Amino acid--[acyl-carrier-protein] ligase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35294; Mature: 35294
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAHTLTEARPAGGADPMAAQPPTFLESLLAAGLLIQTGVRGLYGRSAVFEGIADGLNAA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTRIGADQNAEVLRFPPAIGKDDFETSEYLKSFPQLAGTIHSFCGDDRGHRQLLARLEDK HHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC QDWTDQQQFTGVVMTPAACYPIYPVIGKRGPLPAEGKIVDVMSYCYRHEPSLEPTRMQLF CCCCCHHHHCCEEECCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH RQREYVCLGSPERIVAFRELWMERGLAFGRALQLPVEVDVANDPFFGRGGKIVADSQREL HHCCCEEECCHHHHHHHHHHHHHHCHHHHHEEECCEEEEECCCCCCCCCCCEEECCCCCE KLKFELLIPVNDGAPPTACMSFNYHMDHFGALWHIGLHDGGVAHTGCVGFGIERLVLALL EEEEEEEEEECCCCCCCEEEEECCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH KHHGLDPARWPQAVRETLGGI HHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MDAHTLTEARPAGGADPMAAQPPTFLESLLAAGLLIQTGVRGLYGRSAVFEGIADGLNAA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTRIGADQNAEVLRFPPAIGKDDFETSEYLKSFPQLAGTIHSFCGDDRGHRQLLARLEDK HHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC QDWTDQQQFTGVVMTPAACYPIYPVIGKRGPLPAEGKIVDVMSYCYRHEPSLEPTRMQLF CCCCCHHHHCCEEECCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH RQREYVCLGSPERIVAFRELWMERGLAFGRALQLPVEVDVANDPFFGRGGKIVADSQREL HHCCCEEECCHHHHHHHHHHHHHHCHHHHHEEECCEEEEECCCCCCCCCCCEEECCCCCE KLKFELLIPVNDGAPPTACMSFNYHMDHFGALWHIGLHDGGVAHTGCVGFGIERLVLALL EEEEEEEEEECCCCCCCEEEEECCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH KHHGLDPARWPQAVRETLGGI HHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]