| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94314749
Identifier: 94314749
GI number: 94314749
Start: 18170
End: 19339
Strand: Reverse
Name: 94314749
Synonym: Rmet_5830
Alternate gene names: NA
Gene position: 19339-18170 (Counterclockwise)
Preceding gene: 94314761
Following gene: 94314748
Centisome position: 0.75
GC content: 62.39
Gene sequence:
>1170_bases ATGGTGCGGCGCAGCGGGTTTCTCCGTAGGAGGACGCAGGGAGCCATTGCAGGATCTGTAGCGACGATTTGCGCACATAG CAATGGGCGTGTGAATCTCCGCTGTGCGGCGCACAAGAGCCCGCCTGCGACGACGGCAAGTGACGCTGCGGTAACGCCCG GATTCAAACCGGAGGCCCATAATGGCGGCCTCGATTCACGGACACGGTTCGCACGCCACGCGCTGCGCTGCTCCGACTCA ATAACTACAGGGGGCCCCTTGGCCGCTACCGAAAATACTGGCTCGCAATCACAGCCACAATCGCAATCGCCTGCCGACCT CACGGCTCTGCCCGACAACCCGGACCTGGTACCGGGCATGCCATATCGCCACTACAAGGGTGGCGCCTATCTCGTGACCG GGGTTGGCCGTTTCGAAGCCGACATGACACCGGTCGTGGTGTACGAATCCATGCGTGACCGCTCGCTGCTCTGGGTACGA CACGCCGACGTGTTCACCGAGCCCGTCTCGACCGCGACGGGCGACGTCGCCAGATTCGCGCCGCACTGGGCACCGGCCTT GTCGTGTCTGGACTTCCTGCCACGCAAGACGGTCCTTCAGGTACTGGCCTTGTACGATGCGCCGTACCGCAAATACCATG ACCGGCGACACGTGCTGGAGATGTTCGAGCAAGCCCACGCACTCGGCATCGCACTCAATCCTGCGCAAGCGCTGGCCGTC CTGTTTCATGACGCCGTGTACGTCCCGGGCTTCGAGCACAACGAAGCGGCCTCGGCGGCCTTGCTCGACACCATGGTCGA GGACGTGAACGCCGACGTGATTCACCTTGCAAGGCAGATCATTCTCGACACCCGCACGCATGAAGCAAGCGTGCCCGACG CCGCAACGGTCCTGGATCTCGATCTCCTCCGTCTGGCCGCCGACGATGATGTCTTCGACGCGCATGGGCTAGCCGTATTC GATGAGAACCGCGGCTTGCTGGCGAGCAGGGTCCAACTTTCCGGCGAGGCGCTGTATCACGCATTCATGGTTCGCCGCGC GGCATTCCTCGGGGCACTGGCGCAACGGCCGAAACTGTTTTTGACGACGGCATTCGCCGAATTCGAAGGTCCGGCTCGTC GCAATATCGCAAGAGTTCTTGCAAGCTTCGGGCAAGCGAAAGCCAACTGA
Upstream 100 bases:
>100_bases CGTTTGCGCATGTAGCGCATTAGATCCTTCTGAATACTGATTCAAACTAAATCTAATTCTGATGTTCAGCATAGGAAGGG CACTGAGTGAATGCAAGGTG
Downstream 100 bases:
>100_bases TGCAGGGCTGCGAAGACCATCTCCGGACCTGCCCCGGAGATGTGTCTGAAATATGACTGTCATCGAAATCGCACCAAAGT CGCCCCAAATGACAGATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MVRRSGFLRRRTQGAIAGSVATICAHSNGRVNLRCAAHKSPPATTASDAAVTPGFKPEAHNGGLDSRTRFARHALRCSDS ITTGGPLAATENTGSQSQPQSQSPADLTALPDNPDLVPGMPYRHYKGGAYLVTGVGRFEADMTPVVVYESMRDRSLLWVR HADVFTEPVSTATGDVARFAPHWAPALSCLDFLPRKTVLQVLALYDAPYRKYHDRRHVLEMFEQAHALGIALNPAQALAV LFHDAVYVPGFEHNEAASAALLDTMVEDVNADVIHLARQIILDTRTHEASVPDAATVLDLDLLRLAADDDVFDAHGLAVF DENRGLLASRVQLSGEALYHAFMVRRAAFLGALAQRPKLFLTTAFAEFEGPARRNIARVLASFGQAKAN
Sequences:
>Translated_389_residues MVRRSGFLRRRTQGAIAGSVATICAHSNGRVNLRCAAHKSPPATTASDAAVTPGFKPEAHNGGLDSRTRFARHALRCSDS ITTGGPLAATENTGSQSQPQSQSPADLTALPDNPDLVPGMPYRHYKGGAYLVTGVGRFEADMTPVVVYESMRDRSLLWVR HADVFTEPVSTATGDVARFAPHWAPALSCLDFLPRKTVLQVLALYDAPYRKYHDRRHVLEMFEQAHALGIALNPAQALAV LFHDAVYVPGFEHNEAASAALLDTMVEDVNADVIHLARQIILDTRTHEASVPDAATVLDLDLLRLAADDDVFDAHGLAVF DENRGLLASRVQLSGEALYHAFMVRRAAFLGALAQRPKLFLTTAFAEFEGPARRNIARVLASFGQAKAN >Mature_389_residues MVRRSGFLRRRTQGAIAGSVATICAHSNGRVNLRCAAHKSPPATTASDAAVTPGFKPEAHNGGLDSRTRFARHALRCSDS ITTGGPLAATENTGSQSQPQSQSPADLTALPDNPDLVPGMPYRHYKGGAYLVTGVGRFEADMTPVVVYESMRDRSLLWVR HADVFTEPVSTATGDVARFAPHWAPALSCLDFLPRKTVLQVLALYDAPYRKYHDRRHVLEMFEQAHALGIALNPAQALAV LFHDAVYVPGFEHNEAASAALLDTMVEDVNADVIHLARQIILDTRTHEASVPDAATVLDLDLLRLAADDDVFDAHGLAVF DENRGLLASRVQLSGEALYHAFMVRRAAFLGALAQRPKLFLTTAFAEFEGPARRNIARVLASFGQAKAN
Specific function: Unknown
COG id: COG4339
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42165; Mature: 42165
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRSGFLRRRTQGAIAGSVATICAHSNGRVNLRCAAHKSPPATTASDAAVTPGFKPEAH CCCCCCHHHHHHCCHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC NGGLDSRTRFARHALRCSDSITTGGPLAATENTGSQSQPQSQSPADLTALPDNPDLVPGM CCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCC PYRHYKGGAYLVTGVGRFEADMTPVVVYESMRDRSLLWVRHADVFTEPVSTATGDVARFA CCEEECCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCHHHHCCHHHCCCCHHHHC PHWAPALSCLDFLPRKTVLQVLALYDAPYRKYHDRRHVLEMFEQAHALGIALNPAQALAV CCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHH LFHDAVYVPGFEHNEAASAALLDTMVEDVNADVIHLARQIILDTRTHEASVPDAATVLDL HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH DLLRLAADDDVFDAHGLAVFDENRGLLASRVQLSGEALYHAFMVRRAAFLGALAQRPKLF HHHHHHCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE LTTAFAEFEGPARRNIARVLASFGQAKAN EEEHHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVRRSGFLRRRTQGAIAGSVATICAHSNGRVNLRCAAHKSPPATTASDAAVTPGFKPEAH CCCCCCHHHHHHCCHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC NGGLDSRTRFARHALRCSDSITTGGPLAATENTGSQSQPQSQSPADLTALPDNPDLVPGM CCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCC PYRHYKGGAYLVTGVGRFEADMTPVVVYESMRDRSLLWVRHADVFTEPVSTATGDVARFA CCEEECCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCHHHHCCHHHCCCCHHHHC PHWAPALSCLDFLPRKTVLQVLALYDAPYRKYHDRRHVLEMFEQAHALGIALNPAQALAV CCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHH LFHDAVYVPGFEHNEAASAALLDTMVEDVNADVIHLARQIILDTRTHEASVPDAATVLDL HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH DLLRLAADDDVFDAHGLAVFDENRGLLASRVQLSGEALYHAFMVRRAAFLGALAQRPKLF HHHHHHCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE LTTAFAEFEGPARRNIARVLASFGQAKAN EEEHHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA