| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is pstS1 [H]
Identifier: 94314748
GI number: 94314748
Start: 16992
End: 17993
Strand: Reverse
Name: pstS1 [H]
Synonym: Rmet_5829
Alternate gene names: 94314748
Gene position: 17993-16992 (Counterclockwise)
Preceding gene: 94314749
Following gene: 94314746
Centisome position: 0.7
GC content: 63.27
Gene sequence:
>1002_bases ATGGGCAGACACATCGCGGCGCTGGCGCTGCTATTCGCCGCGGTCAGTGCATTTGCCGGAGATGTCACTGGGGCTGGTTC CACATTCGTCTACCCGCTGATGGCGAAATGGGCGGCCACGTATTACGCCAGGACAGGCCGGCAGATCGATTACCAACCCA TCGGCTCAGGCAACGGCATCCGGCAGATCAAGGCGGCAAGCATCACGTTCGGCACCACGGACATGCCGCTCAAACCCGAA GAGCTCGAGCGCGCAGGACTGGCCCAGTTTCCCATCGCGGTAGGCGGCGTCGTGCCGGTGATCAACCTGCAGGGCATTGG CGCGGGGCAGATCCACATGACGGGCGCGCTGCTGGCCGATATCTATCGCGGCAAGATCGCCAACTGGAACGATGCGGCCA TTGCGTCGGCCAATCCCGGCGTGCAGTTTCCCGACCTGAAGATCACGGTGGTCCATCGCAGCGACGGCTCGGGCACCACG TTCAACTGGACCGACTACCTTTCCAAGGTCAGCCCCGAATGGAAGGCGGCAGTCGGGGCAGGCACCACGGTGCGTTGGCC CATCGGGATGAACGCGAGCGGCAATGAGGGCGTATCGCTCTATATCCACAATATTCGCGGCGCGATCGGCTATGTGGAAC TGACCTACGCGCTGCAGAAGAGCCTGCCCTATGCGTTGGTCCAGAACCGCGATGGTCTCTACGTGAAGCCTTCGCGCGAA TCGTTCAGCGCCGCGGTGACGGCCGTGGAATGGAACCCGCGGCTCGACTTCTATCAGGTGCTGACCAATGCGCCGGGCCC GAACGCGTGGCCGATCACGGGCACGGTCTTCGTGCTGATGCAGCGTTCCGCCGCGCACCCGTCGAATACGAAGGATGCGC TGGCGTTCTTTCAGTGGGCGCTTGCCGAAGGGCAATCCGATGCGTCGGCCGAGCACTACGTGGCACTGCCGCCGGAACTG GTGAAGCAGGTGATCGCGTACTGGGCGGAGACCTTCAAGTAG
Upstream 100 bases:
>100_bases AAGTCGCCCCAAATGACAGATGTCATGCAAACGTCCGGCCATCTGCTAACCTGAATCTCCAGAAGCCGGTTTCGTGCAGC CTGAAGAAGGACCAATAATC
Downstream 100 bases:
>100_bases CGTCGATCAGAACGCGTACGCGGCGCACAGATTTACGACGTTGGTCTCGTGGCCGCGCACCATGCCGAGCGCCTTTGCCA CATCGACGTGCAGCACGCCC
Product: phosphate transporter subunit; periplasmic-binding component of ABC superfamily
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MGRHIAALALLFAAVSAFAGDVTGAGSTFVYPLMAKWAATYYARTGRQIDYQPIGSGNGIRQIKAASITFGTTDMPLKPE ELERAGLAQFPIAVGGVVPVINLQGIGAGQIHMTGALLADIYRGKIANWNDAAIASANPGVQFPDLKITVVHRSDGSGTT FNWTDYLSKVSPEWKAAVGAGTTVRWPIGMNASGNEGVSLYIHNIRGAIGYVELTYALQKSLPYALVQNRDGLYVKPSRE SFSAAVTAVEWNPRLDFYQVLTNAPGPNAWPITGTVFVLMQRSAAHPSNTKDALAFFQWALAEGQSDASAEHYVALPPEL VKQVIAYWAETFK
Sequences:
>Translated_333_residues MGRHIAALALLFAAVSAFAGDVTGAGSTFVYPLMAKWAATYYARTGRQIDYQPIGSGNGIRQIKAASITFGTTDMPLKPE ELERAGLAQFPIAVGGVVPVINLQGIGAGQIHMTGALLADIYRGKIANWNDAAIASANPGVQFPDLKITVVHRSDGSGTT FNWTDYLSKVSPEWKAAVGAGTTVRWPIGMNASGNEGVSLYIHNIRGAIGYVELTYALQKSLPYALVQNRDGLYVKPSRE SFSAAVTAVEWNPRLDFYQVLTNAPGPNAWPITGTVFVLMQRSAAHPSNTKDALAFFQWALAEGQSDASAEHYVALPPEL VKQVIAYWAETFK >Mature_332_residues GRHIAALALLFAAVSAFAGDVTGAGSTFVYPLMAKWAATYYARTGRQIDYQPIGSGNGIRQIKAASITFGTTDMPLKPEE LERAGLAQFPIAVGGVVPVINLQGIGAGQIHMTGALLADIYRGKIANWNDAAIASANPGVQFPDLKITVVHRSDGSGTTF NWTDYLSKVSPEWKAAVGAGTTVRWPIGMNASGNEGVSLYIHNIRGAIGYVELTYALQKSLPYALVQNRDGLYVKPSRES FSAAVTAVEWNPRLDFYQVLTNAPGPNAWPITGTVFVLMQRSAAHPSNTKDALAFFQWALAEGQSDASAEHYVALPPELV KQVIAYWAETFK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=325, Percent_Identity=44.9230769230769, Blast_Score=296, Evalue=1e-81,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 35766; Mature: 35635
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRHIAALALLFAAVSAFAGDVTGAGSTFVYPLMAKWAATYYARTGRQIDYQPIGSGNGI CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC RQIKAASITFGTTDMPLKPEELERAGLAQFPIAVGGVVPVINLQGIGAGQIHMTGALLAD EEEEEEEEEECCCCCCCCHHHHHHCCCHHCCCHHCCEEEEEEECCCCCCEEEEHHHHHHH IYRGKIANWNDAAIASANPGVQFPDLKITVVHRSDGSGTTFNWTDYLSKVSPEWKAAVGA HHHCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHCCCCHHHHHCC GTTVRWPIGMNASGNEGVSLYIHNIRGAIGYVELTYALQKSLPYALVQNRDGLYVKPSRE CCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEECCCCC SFSAAVTAVEWNPRLDFYQVLTNAPGPNAWPITGTVFVLMQRSAAHPSNTKDALAFFQWA CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCCCCCHHHHHHHHHH LAEGQSDASAEHYVALPPELVKQVIAYWAETFK HHCCCCCCCCCCEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure GRHIAALALLFAAVSAFAGDVTGAGSTFVYPLMAKWAATYYARTGRQIDYQPIGSGNGI CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC RQIKAASITFGTTDMPLKPEELERAGLAQFPIAVGGVVPVINLQGIGAGQIHMTGALLAD EEEEEEEEEECCCCCCCCHHHHHHCCCHHCCCHHCCEEEEEEECCCCCCEEEEHHHHHHH IYRGKIANWNDAAIASANPGVQFPDLKITVVHRSDGSGTTFNWTDYLSKVSPEWKAAVGA HHHCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHCCCCHHHHHCC GTTVRWPIGMNASGNEGVSLYIHNIRGAIGYVELTYALQKSLPYALVQNRDGLYVKPSRE CCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEECCCCC SFSAAVTAVEWNPRLDFYQVLTNAPGPNAWPITGTVFVLMQRSAAHPSNTKDALAFFQWA CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCCCCCHHHHHHHHHH LAEGQSDASAEHYVALPPELVKQVIAYWAETFK HHCCCCCCCCCCEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]