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The map label for this gene is cyoA [H]

Identifier: 94314709

GI number: 94314709

Start: 2546460

End: 2546825

Strand: Reverse

Name: cyoA [H]

Synonym: Rmet_5790

Alternate gene names: 94314709

Gene position: 2546825-2546460 (Counterclockwise)

Preceding gene: 94314710

Following gene: 94314707

Centisome position: 98.71

GC content: 63.66

Gene sequence:

>366_bases
GTGAAGCCCACCAGCGCTACCGCTCATGAATCGTCGCACGGCAGCATTCGCAGCCACCTGATCGGCTACGGGCTGTCGGT
GGTGCTGACCCTGGTGTCCTTCGGTGCCGTGATGAGTGGGGTACTGCCGCCGGGCTACGGGCTCGCGGTCATCGTCCTGC
TCTGCATCGCGCAGTTGCTGGTGCAACTGGTCTTCTTCCTGCATCTGGGCCCGCGCAAGGGGCAGCGTGGCAACACGGCG
ATCTTCGCCTGCACGGTGTTCCTGATTGCCATCGTGGTGTCTGGCTCGCTGTGGGTCATGCACAACGCCAATCTGAACAT
GATGCCGATGCAGTCCATGCCGCTGCAGGCCAGCCCGAAGGGCTGA

Upstream 100 bases:

>100_bases
GCATCGTGCGTCGACGCCTGGCCTGCCTGAGCCTGTTCTGGCACTTCCTGGATCTCGTGTGGATCTGCGTTTTCTCCATC
GTCTACCTGAGGACCTTCCT

Downstream 100 bases:

>100_bases
GCGAATCGAACCGATCCGGTTTGGGGAAGGCGTGGCGGCACAATGGGCGTTGTGCCGCCGCGCCCCTTTTTTATCCAGGC
TTCAACTCGGCGGCGAGCCG

Product: cytochrome o ubiquinol oxidase subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Cytochrome o ubiquinol oxidase subunit IV [H]

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKPTSATAHESSHGSIRSHLIGYGLSVVLTLVSFGAVMSGVLPPGYGLAVIVLLCIAQLLVQLVFFLHLGPRKGQRGNTA
IFACTVFLIAIVVSGSLWVMHNANLNMMPMQSMPLQASPKG

Sequences:

>Translated_121_residues
MKPTSATAHESSHGSIRSHLIGYGLSVVLTLVSFGAVMSGVLPPGYGLAVIVLLCIAQLLVQLVFFLHLGPRKGQRGNTA
IFACTVFLIAIVVSGSLWVMHNANLNMMPMQSMPLQASPKG
>Mature_121_residues
MKPTSATAHESSHGSIRSHLIGYGLSVVLTLVSFGAVMSGVLPPGYGLAVIVLLCIAQLLVQLVFFLHLGPRKGQRGNTA
IFACTVFLIAIVVSGSLWVMHNANLNMMPMQSMPLQASPKG

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=104, Percent_Identity=41.3461538461538, Blast_Score=87, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 12787; Mature: 12787

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTSATAHESSHGSIRSHLIGYGLSVVLTLVSFGAVMSGVLPPGYGLAVIVLLCIAQLL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQLVFFLHLGPRKGQRGNTAIFACTVFLIAIVVSGSLWVMHNANLNMMPMQSMPLQASPK
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC
G
C
>Mature Secondary Structure
MKPTSATAHESSHGSIRSHLIGYGLSVVLTLVSFGAVMSGVLPPGYGLAVIVLLCIAQLL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQLVFFLHLGPRKGQRGNTAIFACTVFLIAIVVSGSLWVMHNANLNMMPMQSMPLQASPK
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]