| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94314621
Identifier: 94314621
GI number: 94314621
Start: 2460276
End: 2461430
Strand: Reverse
Name: 94314621
Synonym: Rmet_5702
Alternate gene names: NA
Gene position: 2461430-2460276 (Counterclockwise)
Preceding gene: 94314622
Following gene: 94314620
Centisome position: 95.4
GC content: 62.08
Gene sequence:
>1155_bases ATGCTGGTCACCCGCCTGACACTTTGCGTACTGGCATTGATTGCCACCGTCGCACAAGCCGCCGACAAGGTAGCCTTCGC CGGCTTCGCCTATGCCGGCGAAGCCCGACAGATCGATTCGCGCTTTCCGCTGACGCGCAAGGTGGAAGCCGAGCTGGCCG CCAATGGCCGGAGTCCTTCGAAGCTCATCACGCAGTCGCTGGCGGCAAATCCGCCGGCGAACTTCGCCATTACTACCGAC GGCATGGCCAGTCTCAAGGACAGCGATCAGGCACTGGCCACCGCGCTTGTGGTGACCAGCGAATCGGTGTCCAGCGAACG TTTCGGATCGATCTACAAGGTCATGACGAATCTGCGTGGCCAGGTGCTGGTGTTCGACTTCAAGGCGATGACGGTGGTGC GTGCGTATCCGCTGAACGTCAGCTATCTGGATGTGCTTGACCACATGCCGGGCGATGCCGAGAAGCGCGACCGGGTCAAA CGGCTGCTGGCTGGCGGTGAGCGCCCCGGTTTGCTCGATCGCTATGTGCGGGCGTTGTCATTGGCGCAGTTGCCGTCTTC CGGCACGCGTTACCTGCAGATCGAACGCGTAGAACTGAGTCCCGGCGCCAGGGCGCAATTGCCGGAGGCGTTGCGCGGCG ATGGTGTGGCCGAGGGCTGGGTGGCCGATATGTTCGGCGAAGCGCTGCTCGACAAGGCGCAAGTGCCGATGCTGCCATTC ACCAAGGGCTATGCCATCGGCAATGCGATGTCGATGCGCTTCAGCGATGGCGAGGTCTTCAATCTCCAGCTGCCGAAGCC CGACTACACGATCGACCTGTCCGTGAAGGACTTCAAGCGGGTCGAGTACGGTAGTTCGGCGGCCGGCACGAGCTACATCT ACGCATCCTACAGCCACGTCTCGATGGCCGAGCCCATGTCGGGCCGCCGCTATCTGGATGCTGACTTCAAGAACGGCGAG GTCAAGGCGGTACCGGTGACGCAGTCTCGCACCGACGACTTCCCGGCATTCGCGGAATCCCTGCGAGGGCTGTTTACCAA GCTGGCCGATGTGGTCGGCGGCAAGGACAGTGACTGGTTGGCTGCCGCCGCGAGCGGCGACAACGTGAAGAGCCAGATCG AAAGCACACGAGGAGTGATCAAATCATGCAGGTAA
Upstream 100 bases:
>100_bases CAAGCTGCTTCCGTATTGAATTTCAGAGGCTTCCTAATCTCAGGCAACGGCGCTGACGGCAGAATTTCCGGTCGTTGATT GACTCTCCGTAGCTCGCTCC
Downstream 100 bases:
>100_bases TTCGTAACCTATGGTGGCTGCTGGTACTGGCCAGCAGTCTTGCATCCGCGCAGGTGGTGACATCCAAGGGGATGGCAACC GTCAAGTACGACGGCTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MLVTRLTLCVLALIATVAQAADKVAFAGFAYAGEARQIDSRFPLTRKVEAELAANGRSPSKLITQSLAANPPANFAITTD GMASLKDSDQALATALVVTSESVSSERFGSIYKVMTNLRGQVLVFDFKAMTVVRAYPLNVSYLDVLDHMPGDAEKRDRVK RLLAGGERPGLLDRYVRALSLAQLPSSGTRYLQIERVELSPGARAQLPEALRGDGVAEGWVADMFGEALLDKAQVPMLPF TKGYAIGNAMSMRFSDGEVFNLQLPKPDYTIDLSVKDFKRVEYGSSAAGTSYIYASYSHVSMAEPMSGRRYLDADFKNGE VKAVPVTQSRTDDFPAFAESLRGLFTKLADVVGGKDSDWLAAAASGDNVKSQIESTRGVIKSCR
Sequences:
>Translated_384_residues MLVTRLTLCVLALIATVAQAADKVAFAGFAYAGEARQIDSRFPLTRKVEAELAANGRSPSKLITQSLAANPPANFAITTD GMASLKDSDQALATALVVTSESVSSERFGSIYKVMTNLRGQVLVFDFKAMTVVRAYPLNVSYLDVLDHMPGDAEKRDRVK RLLAGGERPGLLDRYVRALSLAQLPSSGTRYLQIERVELSPGARAQLPEALRGDGVAEGWVADMFGEALLDKAQVPMLPF TKGYAIGNAMSMRFSDGEVFNLQLPKPDYTIDLSVKDFKRVEYGSSAAGTSYIYASYSHVSMAEPMSGRRYLDADFKNGE VKAVPVTQSRTDDFPAFAESLRGLFTKLADVVGGKDSDWLAAAASGDNVKSQIESTRGVIKSCR >Mature_384_residues MLVTRLTLCVLALIATVAQAADKVAFAGFAYAGEARQIDSRFPLTRKVEAELAANGRSPSKLITQSLAANPPANFAITTD GMASLKDSDQALATALVVTSESVSSERFGSIYKVMTNLRGQVLVFDFKAMTVVRAYPLNVSYLDVLDHMPGDAEKRDRVK RLLAGGERPGLLDRYVRALSLAQLPSSGTRYLQIERVELSPGARAQLPEALRGDGVAEGWVADMFGEALLDKAQVPMLPF TKGYAIGNAMSMRFSDGEVFNLQLPKPDYTIDLSVKDFKRVEYGSSAAGTSYIYASYSHVSMAEPMSGRRYLDADFKNGE VKAVPVTQSRTDDFPAFAESLRGLFTKLADVVGGKDSDWLAAAASGDNVKSQIESTRGVIKSCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41524; Mature: 41524
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVTRLTLCVLALIATVAQAADKVAFAGFAYAGEARQIDSRFPLTRKVEAELAANGRSPS CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCCHHHHHHHHCCCCCHH KLITQSLAANPPANFAITTDGMASLKDSDQALATALVVTSESVSSERFGSIYKVMTNLRG HHHHHHHHCCCCCCEEEECCCHHHCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCC QVLVFDFKAMTVVRAYPLNVSYLDVLDHMPGDAEKRDRVKRLLAGGERPGLLDRYVRALS CEEEEEHHHEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH LAQLPSSGTRYLQIERVELSPGARAQLPEALRGDGVAEGWVADMFGEALLDKAQVPMLPF HHHCCCCCCEEEEEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC TKGYAIGNAMSMRFSDGEVFNLQLPKPDYTIDLSVKDFKRVEYGSSAAGTSYIYASYSHV CCCEEECCEEEEEECCCCEEEEECCCCCEEEEEEHHHHHHHCCCCCCCCCEEEEEECCCC SMAEPMSGRRYLDADFKNGEVKAVPVTQSRTDDFPAFAESLRGLFTKLADVVGGKDSDWL CCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE AAAASGDNVKSQIESTRGVIKSCR EEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVTRLTLCVLALIATVAQAADKVAFAGFAYAGEARQIDSRFPLTRKVEAELAANGRSPS CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCCHHHHHHHHCCCCCHH KLITQSLAANPPANFAITTDGMASLKDSDQALATALVVTSESVSSERFGSIYKVMTNLRG HHHHHHHHCCCCCCEEEECCCHHHCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCC QVLVFDFKAMTVVRAYPLNVSYLDVLDHMPGDAEKRDRVKRLLAGGERPGLLDRYVRALS CEEEEEHHHEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH LAQLPSSGTRYLQIERVELSPGARAQLPEALRGDGVAEGWVADMFGEALLDKAQVPMLPF HHHCCCCCCEEEEEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC TKGYAIGNAMSMRFSDGEVFNLQLPKPDYTIDLSVKDFKRVEYGSSAAGTSYIYASYSHV CCCEEECCEEEEEECCCCEEEEECCCCCEEEEEEHHHHHHHCCCCCCCCCEEEEEECCCC SMAEPMSGRRYLDADFKNGEVKAVPVTQSRTDDFPAFAESLRGLFTKLADVVGGKDSDWL CCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE AAAASGDNVKSQIESTRGVIKSCR EEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA