| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314611
Identifier: 94314611
GI number: 94314611
Start: 2451191
End: 2452411
Strand: Direct
Name: 94314611
Synonym: Rmet_5692
Alternate gene names: NA
Gene position: 2451191-2452411 (Clockwise)
Preceding gene: 94314609
Following gene: 94314612
Centisome position: 95.0
GC content: 69.53
Gene sequence:
>1221_bases ATGGACTCGCTGATCACGGCTGCGGCGTTGGCGCTTGCAGCCGGCGACCCACTTGGCGCGCTCAATCGCGTAGCCCTGCG CGACGATCCCCCTGCACTCGCGCTGCGCGGCATCGCCATGGCGCAGCTTGGCGAATTCGCCCGCGCCAAGGCACTGCTAC GCAGCGCCGCACGCGCCTTCGGCGCGAAGGAGGCAGTCTCCCGGGCGCGATGTATCGTTGCCGAGGCAGAAGTCGCACTG GCCTCGCGTGACCTGGGCTGGCGGACCAAATGGCTCGACGCGGCGCGCGTCACGCTGGAAGCGCATGGCGACCACGCCAA CGCCGCATGCGCACGCTATCTGGAGCTTCGCCGTCAGTTGCTGACCGGACAGCTCGACGCGGCCGAGCACGCGCTGGACG CCATCGATCCCACGGCCTTGCCACCGGCATTGCGCGTCGCCCACGAGCTGGTTGCCGCCGGTGTTGCCATGCGGCGGCTG CGCACACAGGACGCCCGCTTGGCTTTGATCCGCGCCGAGATCTTCGCGCGGGATGCCGGCATCCCCGCGCTGCTCGCCGA GGTCCAGAGTGCCACCGCGCAACTCGATGCGCCGGCGGCCCGCCTGATCGCCCGTGGTGACATCCGATCCATTGGGCTCG ATGAGGTGGCGTCGCTGCTGGCGTCTCCCACGCTCGTGGCCGACGCGTGCCGCCTGGCCGTGAGCAAGGCTGGCGCGGTG GTCTCGCTGGCGTCGCGTCCAGTGCTGTTCGCGCTGGCTCGCACGCTGGCGGAGGCATGGCCCGACGATGTCGCGCGCGA CACGCTGATCGCGCACGCCTTCCGCACCCGTCATGCCGACGAAACGCTGCGCGCGCGACTGCGCGTGGAAATCGGCCGAT TGCGTACGGTACTAAGTTCGATGGCCGGCATCCATGCAACGAAGCGCGGCTTCGCATTGGCGCCACGCCAAGCGACCGAA GTCGCGGTGCTGGCGCAGCCAGTCGAGGATGCGCATGCCATGCTGCTGGCCTGCCTTGCGGACGGCGAGGCTTGGTCAAG TTCCTCGCTGGCGCTCGCACTTGGCGCCAGCCAGCGCTCGATTCAGCGGGCGCTCGAAACACTGGCAGCCGCCGGCAAGG TGCAGTCGATCGGGCGCGGGCGCGCCCAGCGCTGGATCACCGCGCCGATGCCTGGATTCACGACAACCTTGTTACTCCAC GTGCCGCTGCCAGGCGATTAG
Upstream 100 bases:
>100_bases TGTGTGGTCATCGTCGCTCCCTCCAATGCAGTAGGTATCCCTGTGCTAGATTAGGCGCCTCCATCGCCAGTGCGGGAGTG ACAAATATGTCGGGATTCGG
Downstream 100 bases:
>100_bases CATGAAATCCCGCTCAACGGATAACCATCATGAAACGAACCAACGCAACAATCCTCCGCGAATTCGGCCCCTTCCCTGGC GTCGAGCAAGTGAATGGCGT
Product: putative DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDSLITAAALALAAGDPLGALNRVALRDDPPALALRGIAMAQLGEFARAKALLRSAARAFGAKEAVSRARCIVAEAEVAL ASRDLGWRTKWLDAARVTLEAHGDHANAACARYLELRRQLLTGQLDAAEHALDAIDPTALPPALRVAHELVAAGVAMRRL RTQDARLALIRAEIFARDAGIPALLAEVQSATAQLDAPAARLIARGDIRSIGLDEVASLLASPTLVADACRLAVSKAGAV VSLASRPVLFALARTLAEAWPDDVARDTLIAHAFRTRHADETLRARLRVEIGRLRTVLSSMAGIHATKRGFALAPRQATE VAVLAQPVEDAHAMLLACLADGEAWSSSSLALALGASQRSIQRALETLAAAGKVQSIGRGRAQRWITAPMPGFTTTLLLH VPLPGD
Sequences:
>Translated_406_residues MDSLITAAALALAAGDPLGALNRVALRDDPPALALRGIAMAQLGEFARAKALLRSAARAFGAKEAVSRARCIVAEAEVAL ASRDLGWRTKWLDAARVTLEAHGDHANAACARYLELRRQLLTGQLDAAEHALDAIDPTALPPALRVAHELVAAGVAMRRL RTQDARLALIRAEIFARDAGIPALLAEVQSATAQLDAPAARLIARGDIRSIGLDEVASLLASPTLVADACRLAVSKAGAV VSLASRPVLFALARTLAEAWPDDVARDTLIAHAFRTRHADETLRARLRVEIGRLRTVLSSMAGIHATKRGFALAPRQATE VAVLAQPVEDAHAMLLACLADGEAWSSSSLALALGASQRSIQRALETLAAAGKVQSIGRGRAQRWITAPMPGFTTTLLLH VPLPGD >Mature_406_residues MDSLITAAALALAAGDPLGALNRVALRDDPPALALRGIAMAQLGEFARAKALLRSAARAFGAKEAVSRARCIVAEAEVAL ASRDLGWRTKWLDAARVTLEAHGDHANAACARYLELRRQLLTGQLDAAEHALDAIDPTALPPALRVAHELVAAGVAMRRL RTQDARLALIRAEIFARDAGIPALLAEVQSATAQLDAPAARLIARGDIRSIGLDEVASLLASPTLVADACRLAVSKAGAV VSLASRPVLFALARTLAEAWPDDVARDTLIAHAFRTRHADETLRARLRVEIGRLRTVLSSMAGIHATKRGFALAPRQATE VAVLAQPVEDAHAMLLACLADGEAWSSSSLALALGASQRSIQRALETLAAAGKVQSIGRGRAQRWITAPMPGFTTTLLLH VPLPGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42747; Mature: 42747
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLITAAALALAAGDPLGALNRVALRDDPPALALRGIAMAQLGEFARAKALLRSAARAF CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAKEAVSRARCIVAEAEVALASRDLGWRTKWLDAARVTLEAHGDHANAACARYLELRRQL CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHH LTGQLDAAEHALDAIDPTALPPALRVAHELVAAGVAMRRLRTQDARLALIRAEIFARDAG HHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC IPALLAEVQSATAQLDAPAARLIARGDIRSIGLDEVASLLASPTLVADACRLAVSKAGAV CHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCE VSLASRPVLFALARTLAEAWPDDVARDTLIAHAFRTRHADETLRARLRVEIGRLRTVLSS EHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH MAGIHATKRGFALAPRQATEVAVLAQPVEDAHAMLLACLADGEAWSSSSLALALGASQRS HHHHHHHCCCCEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHH IQRALETLAAAGKVQSIGRGRAQRWITAPMPGFTTTLLLHVPLPGD HHHHHHHHHHHHHHHHHHCCHHHCEEECCCCCCCEEEEEEECCCCC >Mature Secondary Structure MDSLITAAALALAAGDPLGALNRVALRDDPPALALRGIAMAQLGEFARAKALLRSAARAF CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAKEAVSRARCIVAEAEVALASRDLGWRTKWLDAARVTLEAHGDHANAACARYLELRRQL CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHH LTGQLDAAEHALDAIDPTALPPALRVAHELVAAGVAMRRLRTQDARLALIRAEIFARDAG HHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC IPALLAEVQSATAQLDAPAARLIARGDIRSIGLDEVASLLASPTLVADACRLAVSKAGAV CHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCE VSLASRPVLFALARTLAEAWPDDVARDTLIAHAFRTRHADETLRARLRVEIGRLRTVLSS EHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH MAGIHATKRGFALAPRQATEVAVLAQPVEDAHAMLLACLADGEAWSSSSLALALGASQRS HHHHHHHCCCCEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHH IQRALETLAAAGKVQSIGRGRAQRWITAPMPGFTTTLLLHVPLPGD HHHHHHHHHHHHHHHHHHCCHHHCEEECCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA