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The map label for this gene is nimC

Identifier: 94314596

GI number: 94314596

Start: 2434742

End: 2436001

Strand: Reverse

Name: nimC

Synonym: Rmet_5677

Alternate gene names: NA

Gene position: 2436001-2434742 (Counterclockwise)

Preceding gene: 94314598

Following gene: 94314595

Centisome position: 94.42

GC content: 68.65

Gene sequence:

>1260_bases
ATGAAGCCAGCAATGCGAAACATCGTGTTGGCGATGATAGGAGCCGCGTTGCTCTCGAATGGTGCCGTCTTCGCGCAGGA
CGCGCAGTCGTACCTGCCTGCCGAGGTGGCAGTGCGCGAGGCCGTTGCGCGGGCGCCTGACGTGCTTACGGCTGAAGCGC
GGCGGGATGCCACGACGGCACGCGCCGCAGGCACGCGAGCGGGCACGGCGGAAACGGTTGTCCGGGTGATCGGCCAGGGC
CGGCAGGTGCGCGAGCCCTCCGAGCGCTATCCCGAAGGCCAGATTGCAATCGAGCGTCCGCTGCGTCTCTGGGGCAAGGC
GGAGGCCGACGGCGTGCTGGCCGATCTCGCGACCGAGGCCGGCAACCTCTCGGTCAAGGACGCCAAGCACGAAACATCGC
GTCAGATCCTGAGTCTCTGGATCGCAGCGATTCGCGCGGGGCAGGCCCGCATGGCCGCCGAGGACAATGCGCGCGCGGCG
GCGGACCTCGCAGCCATGACGACGCGGCGCGTGCAGGTGGGTGATGCCGCGCGTCTCGACGCGGAGCTGGCAGCGGCGGA
ACTGGCGCGCACGCGCGCGACGGTGGCCACTGCCCAAGCCACTGAGTCGGCATCGCTCGCCGAGTTGCGCGCGCGTTTCC
CGATGCTGGGTCAACCGGTGCAGGCGCCCGTTCGCATCGCGCTGCCGCCGCCTCCGCAGGAGCCGGTCGAGCAGTTGCGC
GGCATCTACGTGCAGGACAGCCATGAATACCTGCTGGCGATGGCGGAAGAAGCCCATGCGTTGCAGCAGGCCAAACGATC
GGATCTGGACCGCAAGCCGGACCCGACCGTCGGCATGTTCGTCACGGTGGAACGCGGCGGCGCCGAGCGGATTCTCGGGG
TCAGCGTGTCGATGCCGCTTGGCTCGGCGTATCGCCGCTCTAACGCAGTGGCGGCAGCGGCAGATGCCGAGGCGGCCGCG
CGGAAGCGGCTGGGCATCGAACAACGTTTGGGTGCGGAGTTCGATGTCTTGTACCGGAACCTGTCCGGCAAGCGCGCGGC
GGCAGCGGCGCAGACCGAGGCCGCGACGCTGCAACGGACGGCGTCGGATCGCGCAACGCGCGCGTATCGGGCCGGAGAAT
CTGGCTTGCAGGAGCTGATCGTCGTGCGTCGAAACCTGGCCGACGCCATGCTGGCGGAGCGCCTGGCCAATGTCGACGTG
CTCGAGTCGGATAGCCGTCTGAAGCTCGATCTCCATCGCATGTGGGACTTTGACGACTGA

Upstream 100 bases:

>100_bases
GACTGGTGACGTCCACCGCGCTGACGCTGCTCCTGCTGCCGCTGTTGTTCGAACGCTTCGGCGTGCCTGGCCTTCGCCCG
TCTGCCAAGGGAGAGATGCA

Downstream 100 bases:

>100_bases
GCGGTAACGCCCCGGCAGACGCTGCAAGTCTGCCGGGTACCCGTTAACAATCTATATTTTTATAGACTATAATTCTCGCA
AATGTTGCCCGGCCCGTGCC

Product: heavy metal cation tricomponent efflux outer membrane porin NimC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKPAMRNIVLAMIGAALLSNGAVFAQDAQSYLPAEVAVREAVARAPDVLTAEARRDATTARAAGTRAGTAETVVRVIGQG
RQVREPSERYPEGQIAIERPLRLWGKAEADGVLADLATEAGNLSVKDAKHETSRQILSLWIAAIRAGQARMAAEDNARAA
ADLAAMTTRRVQVGDAARLDAELAAAELARTRATVATAQATESASLAELRARFPMLGQPVQAPVRIALPPPPQEPVEQLR
GIYVQDSHEYLLAMAEEAHALQQAKRSDLDRKPDPTVGMFVTVERGGAERILGVSVSMPLGSAYRRSNAVAAAADAEAAA
RKRLGIEQRLGAEFDVLYRNLSGKRAAAAAQTEAATLQRTASDRATRAYRAGESGLQELIVVRRNLADAMLAERLANVDV
LESDSRLKLDLHRMWDFDD

Sequences:

>Translated_419_residues
MKPAMRNIVLAMIGAALLSNGAVFAQDAQSYLPAEVAVREAVARAPDVLTAEARRDATTARAAGTRAGTAETVVRVIGQG
RQVREPSERYPEGQIAIERPLRLWGKAEADGVLADLATEAGNLSVKDAKHETSRQILSLWIAAIRAGQARMAAEDNARAA
ADLAAMTTRRVQVGDAARLDAELAAAELARTRATVATAQATESASLAELRARFPMLGQPVQAPVRIALPPPPQEPVEQLR
GIYVQDSHEYLLAMAEEAHALQQAKRSDLDRKPDPTVGMFVTVERGGAERILGVSVSMPLGSAYRRSNAVAAAADAEAAA
RKRLGIEQRLGAEFDVLYRNLSGKRAAAAAQTEAATLQRTASDRATRAYRAGESGLQELIVVRRNLADAMLAERLANVDV
LESDSRLKLDLHRMWDFDD
>Mature_419_residues
MKPAMRNIVLAMIGAALLSNGAVFAQDAQSYLPAEVAVREAVARAPDVLTAEARRDATTARAAGTRAGTAETVVRVIGQG
RQVREPSERYPEGQIAIERPLRLWGKAEADGVLADLATEAGNLSVKDAKHETSRQILSLWIAAIRAGQARMAAEDNARAA
ADLAAMTTRRVQVGDAARLDAELAAAELARTRATVATAQATESASLAELRARFPMLGQPVQAPVRIALPPPPQEPVEQLR
GIYVQDSHEYLLAMAEEAHALQQAKRSDLDRKPDPTVGMFVTVERGGAERILGVSVSMPLGSAYRRSNAVAAAADAEAAA
RKRLGIEQRLGAEFDVLYRNLSGKRAAAAAQTEAATLQRTASDRATRAYRAGESGLQELIVVRRNLADAMLAERLANVDV
LESDSRLKLDLHRMWDFDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44991; Mature: 44991

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAMRNIVLAMIGAALLSNGAVFAQDAQSYLPAEVAVREAVARAPDVLTAEARRDATTA
CCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RAAGTRAGTAETVVRVIGQGRQVREPSERYPEGQIAIERPLRLWGKAEADGVLADLATEA
HHCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHCC
GNLSVKDAKHETSRQILSLWIAAIRAGQARMAAEDNARAAADLAAMTTRRVQVGDAARLD
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHEECCCHHHHH
AELAAAELARTRATVATAQATESASLAELRARFPMLGQPVQAPVRIALPPPPQEPVEQLR
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHC
GIYVQDSHEYLLAMAEEAHALQQAKRSDLDRKPDPTVGMFVTVERGGAERILGVSVSMPL
CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCC
GSAYRRSNAVAAAADAEAAARKRLGIEQRLGAEFDVLYRNLSGKRAAAAAQTEAATLQRT
CHHHHHCCCEEEHHHHHHHHHHHCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ASDRATRAYRAGESGLQELIVVRRNLADAMLAERLANVDVLESDSRLKLDLHRMWDFDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEHHHHCCCCC
>Mature Secondary Structure
MKPAMRNIVLAMIGAALLSNGAVFAQDAQSYLPAEVAVREAVARAPDVLTAEARRDATTA
CCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RAAGTRAGTAETVVRVIGQGRQVREPSERYPEGQIAIERPLRLWGKAEADGVLADLATEA
HHCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHCC
GNLSVKDAKHETSRQILSLWIAAIRAGQARMAAEDNARAAADLAAMTTRRVQVGDAARLD
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHEECCCHHHHH
AELAAAELARTRATVATAQATESASLAELRARFPMLGQPVQAPVRIALPPPPQEPVEQLR
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHC
GIYVQDSHEYLLAMAEEAHALQQAKRSDLDRKPDPTVGMFVTVERGGAERILGVSVSMPL
CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCC
GSAYRRSNAVAAAADAEAAARKRLGIEQRLGAEFDVLYRNLSGKRAAAAAQTEAATLQRT
CHHHHHCCCEEEHHHHHHHHHHHCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ASDRATRAYRAGESGLQELIVVRRNLADAMLAERLANVDVLESDSRLKLDLHRMWDFDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA