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The map label for this gene is tse [H]

Identifier: 94314560

GI number: 94314560

Start: 2400778

End: 2402337

Strand: Direct

Name: tse [H]

Synonym: Rmet_5641

Alternate gene names: 94314560

Gene position: 2400778-2402337 (Clockwise)

Preceding gene: 291481595

Following gene: 94314564

Centisome position: 93.05

GC content: 64.74

Gene sequence:

>1560_bases
ATGTTGCATAACCTGAGCCTGAGAAAGAAGCTCATGCTGCCGCTGGTGCTGAGCTGGACCTGCCTGCTGGCCATCACGCT
GTGGAATGCATGGCAAATGCGAGACCTGCGTCTGCGGGATCGAGAACTGACGCTGCAACAGGTCACGGACACGGCCAACT
CGGTCGTGGCCGAGTACGAAGCCATGGCGCGCGCAGGCAAGCTGAGCGCCGAGGAAGCCCAGAAGCAGGCGCTCGACCGC
GTGCGCGTGATGCGTTTTGGCGGCGATGGCTACTTCACCGTGATGAGGTCCGACGCTGTCGTTCTGATGCACGCGATCAA
GCCCGAACTCGATGGCAAGAACATGTCGGAGATGAAGGACCCTAACGGCGTCTATCTGTTCCGCGATATCGCGCAGATCG
GCAAGACCGCCGGCAAGGGCTTCCTTGAATACGCCTGGCCCAAGCCAGGGGCCGAGGCGCCGCAGCCCAAACTGAGCTAT
GTGCTGAACTTCAAGCCGTGGGACTGGAACTTCATCGCCGGTTTCTACATGGATGACATCCAGGCCGAGTTCCGCGCGTC
GCTCTGGCAAGCGCTCGGCTGGCTGCTGGGCGTGGGCGCGCTGATGACCGTGGTGATGGTGCGCGTTTCCGCCAGTCTGC
AGAAGCAGCTTGGCGGCGAACCATCGCTGACCTCGGAGATCGCCGCGCGCATCGCCGAAGGTGATCTTGCTTCGCACGTG
AACGTGGCGCCGAACGATCGGGAAAGCGTGCTGTTCAACATGCAGCAGATGCAGGGGCGGCTGACGGGTGCCATCGGCCA
GATTCGCGGTTCGGCGGATGCGATCGCAGGCGCCGCCAAGCAGATTGCGGCCGGCAATGTCGACCTGTCACGCCGCAGCG
AGGAACAGGCCGCATCGCTTGAGCAGACCGCGGCCAGCATGGAAGAGCTGACCGGCACGGTTCGCCAGAGCGCTGACAAC
GCCCGCCAGGCGGCGCGGCTGGCCGAAGGCGCATCGGAGATCGCTGTACGCGGCGGAGCGATCGTGCACCAGGTGGTGGA
CACGATGGGCGAGATCAAGGCGGCGTCCAGCAAGGTGGTGGACATCATCGGCGTCATCGAGGGCATTGCATTCCAGACCA
ATATCCTGGCGCTGAACGCGGCGGTGGAGGCCGCGCGCGCCGGCGAGCAGGGACGCGGCTTTGCGGTGGTGGCCGGCGAG
GTGCGCAGCCTGGCCCAGCGTAGCGCCACGGCGGCCAAGGAGATCAAGGGATTGATCGACAACTCGGCGCAGCGTGTCGA
GGACGGCTCAGTGCTGGTCGAAGACGCAGGCAAGGCGATGGGAGAAATCGTCGAGGCCGTGAAGCGCGTGACCGACCTGA
TGGGCGAAATGCGTGCGGCCACCGAAGAACAGACCGGCGGGATCGAGCAGGTCAACCAGGCCGTCTCACAGATGGACCAG
ATGGCGCAGCAGAATGCGGCGCTGGTGGAAGAGGCAACCGCCGCCGCGGCCTCGCTCGAGGATCAGGCTGATGCACTGCA
CCGCGCAGTCGGCCAGTTCAGGCTAGCGGGCGCGATTTAG

Upstream 100 bases:

>100_bases
GACGCCGCCGTTATGGCCGGTCAGAGAGGACGCGCGAAGACAAACCATACAAAGACCCGAAAGCGCCCCAATCAACAACC
GATGTGAACGGAGGATAAGG

Downstream 100 bases:

>100_bases
GAATGGCCTTGGGGGGAGCACGCCGCACGCGATTCAGATGCGGGCGGTTCGCTCCTCTCTCCAGCCTCGCGAGAGAGCGG
AACACCGATGGAACATGCTG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MLHNLSLRKKLMLPLVLSWTCLLAITLWNAWQMRDLRLRDRELTLQQVTDTANSVVAEYEAMARAGKLSAEEAQKQALDR
VRVMRFGGDGYFTVMRSDAVVLMHAIKPELDGKNMSEMKDPNGVYLFRDIAQIGKTAGKGFLEYAWPKPGAEAPQPKLSY
VLNFKPWDWNFIAGFYMDDIQAEFRASLWQALGWLLGVGALMTVVMVRVSASLQKQLGGEPSLTSEIAARIAEGDLASHV
NVAPNDRESVLFNMQQMQGRLTGAIGQIRGSADAIAGAAKQIAAGNVDLSRRSEEQAASLEQTAASMEELTGTVRQSADN
ARQAARLAEGASEIAVRGGAIVHQVVDTMGEIKAASSKVVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRSLAQRSATAAKEIKGLIDNSAQRVEDGSVLVEDAGKAMGEIVEAVKRVTDLMGEMRAATEEQTGGIEQVNQAVSQMDQ
MAQQNAALVEEATAAAASLEDQADALHRAVGQFRLAGAI

Sequences:

>Translated_519_residues
MLHNLSLRKKLMLPLVLSWTCLLAITLWNAWQMRDLRLRDRELTLQQVTDTANSVVAEYEAMARAGKLSAEEAQKQALDR
VRVMRFGGDGYFTVMRSDAVVLMHAIKPELDGKNMSEMKDPNGVYLFRDIAQIGKTAGKGFLEYAWPKPGAEAPQPKLSY
VLNFKPWDWNFIAGFYMDDIQAEFRASLWQALGWLLGVGALMTVVMVRVSASLQKQLGGEPSLTSEIAARIAEGDLASHV
NVAPNDRESVLFNMQQMQGRLTGAIGQIRGSADAIAGAAKQIAAGNVDLSRRSEEQAASLEQTAASMEELTGTVRQSADN
ARQAARLAEGASEIAVRGGAIVHQVVDTMGEIKAASSKVVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRSLAQRSATAAKEIKGLIDNSAQRVEDGSVLVEDAGKAMGEIVEAVKRVTDLMGEMRAATEEQTGGIEQVNQAVSQMDQ
MAQQNAALVEEATAAAASLEDQADALHRAVGQFRLAGAI
>Mature_519_residues
MLHNLSLRKKLMLPLVLSWTCLLAITLWNAWQMRDLRLRDRELTLQQVTDTANSVVAEYEAMARAGKLSAEEAQKQALDR
VRVMRFGGDGYFTVMRSDAVVLMHAIKPELDGKNMSEMKDPNGVYLFRDIAQIGKTAGKGFLEYAWPKPGAEAPQPKLSY
VLNFKPWDWNFIAGFYMDDIQAEFRASLWQALGWLLGVGALMTVVMVRVSASLQKQLGGEPSLTSEIAARIAEGDLASHV
NVAPNDRESVLFNMQQMQGRLTGAIGQIRGSADAIAGAAKQIAAGNVDLSRRSEEQAASLEQTAASMEELTGTVRQSADN
ARQAARLAEGASEIAVRGGAIVHQVVDTMGEIKAASSKVVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRSLAQRSATAAKEIKGLIDNSAQRVEDGSVLVEDAGKAMGEIVEAVKRVTDLMGEMRAATEEQTGGIEQVNQAVSQMDQ
MAQQNAALVEEATAAAASLEDQADALHRAVGQFRLAGAI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=322, Percent_Identity=55.2795031055901, Blast_Score=300, Evalue=2e-82,
Organism=Escherichia coli, GI2367378, Length=340, Percent_Identity=54.7058823529412, Blast_Score=291, Evalue=7e-80,
Organism=Escherichia coli, GI1788194, Length=286, Percent_Identity=57.6923076923077, Blast_Score=285, Evalue=4e-78,
Organism=Escherichia coli, GI1787690, Length=329, Percent_Identity=52.2796352583587, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI1789453, Length=246, Percent_Identity=41.869918699187, Blast_Score=184, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 55736; Mature: 55736

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHNLSLRKKLMLPLVLSWTCLLAITLWNAWQMRDLRLRDRELTLQQVTDTANSVVAEYE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMARAGKLSAEEAQKQALDRVRVMRFGGDGYFTVMRSDAVVLMHAIKPELDGKNMSEMKD
HHHHHCCCCHHHHHHHHHHHHHHHEECCCEEEEEEECCHHHHHHHHCCCCCCCCHHHCCC
PNGVYLFRDIAQIGKTAGKGFLEYAWPKPGAEAPQPKLSYVLNFKPWDWNFIAGFYMDDI
CCCEEHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
QAEFRASLWQALGWLLGVGALMTVVMVRVSASLQKQLGGEPSLTSEIAARIAEGDLASHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCC
NVAPNDRESVLFNMQQMQGRLTGAIGQIRGSADAIAGAAKQIAAGNVDLSRRSEEQAASL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHH
EQTAASMEELTGTVRQSADNARQAARLAEGASEIAVRGGAIVHQVVDTMGEIKAASSKVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKGLID
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHC
NSAQRVEDGSVLVEDAGKAMGEIVEAVKRVTDLMGEMRAATEEQTGGIEQVNQAVSQMDQ
CHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MAQQNAALVEEATAAAASLEDQADALHRAVGQFRLAGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLHNLSLRKKLMLPLVLSWTCLLAITLWNAWQMRDLRLRDRELTLQQVTDTANSVVAEYE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMARAGKLSAEEAQKQALDRVRVMRFGGDGYFTVMRSDAVVLMHAIKPELDGKNMSEMKD
HHHHHCCCCHHHHHHHHHHHHHHHEECCCEEEEEEECCHHHHHHHHCCCCCCCCHHHCCC
PNGVYLFRDIAQIGKTAGKGFLEYAWPKPGAEAPQPKLSYVLNFKPWDWNFIAGFYMDDI
CCCEEHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
QAEFRASLWQALGWLLGVGALMTVVMVRVSASLQKQLGGEPSLTSEIAARIAEGDLASHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCC
NVAPNDRESVLFNMQQMQGRLTGAIGQIRGSADAIAGAAKQIAAGNVDLSRRSEEQAASL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHH
EQTAASMEELTGTVRQSADNARQAARLAEGASEIAVRGGAIVHQVVDTMGEIKAASSKVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKGLID
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHC
NSAQRVEDGSVLVEDAGKAMGEIVEAVKRVTDLMGEMRAATEEQTGGIEQVNQAVSQMDQ
CHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MAQQNAALVEEATAAAASLEDQADALHRAVGQFRLAGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]