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The map label for this gene is cyoA [H]

Identifier: 94314527

GI number: 94314527

Start: 2363924

End: 2364973

Strand: Direct

Name: cyoA [H]

Synonym: Rmet_5608

Alternate gene names: 94314527

Gene position: 2363924-2364973 (Clockwise)

Preceding gene: 291481592

Following gene: 94314528

Centisome position: 91.62

GC content: 62.57

Gene sequence:

>1050_bases
ATGCCACGCTTCGATGCAGCAGTGACACCCATCAGGGTGACGGGAAGGTTGCTTTTGCGTTTTACCGCAATCGCGCTATT
GGCGAGTCTGGCCGGGTGCAACGCTGTGCTGCTTTCGCCATCCGGCGATATGGCCATGCGCCAGCGTGACCTGATCATCA
TCGCCACATGTCTGATGCTGCTGATCATCGTCCCGGTGATCTTCCTCACGTTGCTGTTCGCGTGGCGATACCGCGAGAGC
GCCCCCGATTCCCCGTACAACCCCGAGTGGGACCACTCCACGGTGCTCGAACTGGCGATCTGGGCCGCACCGCTGCTGAT
CATCATCGCGCTCGGCGCGGTGACGTGGGTCAGCACCCATCAGCTCGATCCCTACCGGCCACTGACACGACTCGACGAAG
GCCGCCCCGTTCCCACCGAGGTGAAACCGCTCACGGTGGAAGTCGTGGCGCTGGACTGGAAGTGGCTGTTCCTGTATCCC
GAACAAGGCATTGCCACGGTGAACGAACTGGCCGCGCCGGTCGATCGCCCGATCGCCTTCCGGATCACCGCCACCTCGGT
GATGAACGCCTTCTTCGTGCCTTCGCTGGCCGGCATGGTCTACGCCATGCCTGGCATGGAAACCAAGCTCCATGCGGTGA
TCAACAAACCCGGCATCTATGACGGCTTCTCGTCCAACTACAGTGGCGCGGGCTTCTCGCATATGCGGTTCAAGTTCCAC
GGCATGTCGAGCGAGGACTTCGATCGCTGGATCGCGCAGGCCAAATCATCGGGAAGCACCCTGTCGAAGGACGCCTACCT
GAAGCTGGCCCAGCCCAGCGAACGTGAGCCGGTGCAACGCTATGCCAGCGTGGCGCCCGAACTCTACGACCAGATCCTGA
ACCGTTGCGTGGATGGCGGCGCCTGCATGGCCGACACCATGGCGCTCGATCGCAGCCGCGGCAAGTTCGACCCGTCCGGC
GAAATCTGCACGGCAAGCAACACACCGGTCGATTCGCCGCTGTTTGCGCCGGACGTCGTGCTCAACGACGGTAGACGACT
GCTGCGGTGA

Upstream 100 bases:

>100_bases
GTCCCGCAATCACAAGAATAGCGCCTAAACTGCAACTGGAAATCGAAAGATCGTTGGGGCCACCCCAATGCGACGTTAAC
CAGACGCCACTTCCGAGACC

Downstream 100 bases:

>100_bases
AGCGGGGATTCGCCCCCATTTTTCCGGTTCCCGCCAATCATCATCGGTCAATTTTGGCCAACACAGGCCCAGGTGACAAA
CATGCCCGAGCGCTCCGAAC

Product: cytochrome o ubiquinol oxidase subunit II

Products: Ubiquinone-8; H2O. [C]

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MPRFDAAVTPIRVTGRLLLRFTAIALLASLAGCNAVLLSPSGDMAMRQRDLIIIATCLMLLIIVPVIFLTLLFAWRYRES
APDSPYNPEWDHSTVLELAIWAAPLLIIIALGAVTWVSTHQLDPYRPLTRLDEGRPVPTEVKPLTVEVVALDWKWLFLYP
EQGIATVNELAAPVDRPIAFRITATSVMNAFFVPSLAGMVYAMPGMETKLHAVINKPGIYDGFSSNYSGAGFSHMRFKFH
GMSSEDFDRWIAQAKSSGSTLSKDAYLKLAQPSEREPVQRYASVAPELYDQILNRCVDGGACMADTMALDRSRGKFDPSG
EICTASNTPVDSPLFAPDVVLNDGRRLLR

Sequences:

>Translated_349_residues
MPRFDAAVTPIRVTGRLLLRFTAIALLASLAGCNAVLLSPSGDMAMRQRDLIIIATCLMLLIIVPVIFLTLLFAWRYRES
APDSPYNPEWDHSTVLELAIWAAPLLIIIALGAVTWVSTHQLDPYRPLTRLDEGRPVPTEVKPLTVEVVALDWKWLFLYP
EQGIATVNELAAPVDRPIAFRITATSVMNAFFVPSLAGMVYAMPGMETKLHAVINKPGIYDGFSSNYSGAGFSHMRFKFH
GMSSEDFDRWIAQAKSSGSTLSKDAYLKLAQPSEREPVQRYASVAPELYDQILNRCVDGGACMADTMALDRSRGKFDPSG
EICTASNTPVDSPLFAPDVVLNDGRRLLR
>Mature_348_residues
PRFDAAVTPIRVTGRLLLRFTAIALLASLAGCNAVLLSPSGDMAMRQRDLIIIATCLMLLIIVPVIFLTLLFAWRYRESA
PDSPYNPEWDHSTVLELAIWAAPLLIIIALGAVTWVSTHQLDPYRPLTRLDEGRPVPTEVKPLTVEVVALDWKWLFLYPE
QGIATVNELAAPVDRPIAFRITATSVMNAFFVPSLAGMVYAMPGMETKLHAVINKPGIYDGFSSNYSGAGFSHMRFKFHG
MSSEDFDRWIAQAKSSGSTLSKDAYLKLAQPSEREPVQRYASVAPELYDQILNRCVDGGACMADTMALDRSRGKFDPSGE
ICTASNTPVDSPLFAPDVVLNDGRRLLR

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=278, Percent_Identity=47.1223021582734, Blast_Score=286, Evalue=2e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.- [C]

Molecular weight: Translated: 38507; Mature: 38376

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00070 ALDEHYDE_DEHYDR_CYS ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRFDAAVTPIRVTGRLLLRFTAIALLASLAGCNAVLLSPSGDMAMRQRDLIIIATCLML
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCHHHHHHHHHH
LIIVPVIFLTLLFAWRYRESAPDSPYNPEWDHSTVLELAIWAAPLLIIIALGAVTWVSTH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QLDPYRPLTRLDEGRPVPTEVKPLTVEVVALDWKWLFLYPEQGIATVNELAAPVDRPIAF
CCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCHHHHHHHCCCCCCEEE
RITATSVMNAFFVPSLAGMVYAMPGMETKLHAVINKPGIYDGFSSNYSGAGFSHMRFKFH
EEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE
GMSSEDFDRWIAQAKSSGSTLSKDAYLKLAQPSEREPVQRYASVAPELYDQILNRCVDGG
CCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHCCCC
ACMADTMALDRSRGKFDPSGEICTASNTPVDSPLFAPDVVLNDGRRLLR
CHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCHHHCC
>Mature Secondary Structure 
PRFDAAVTPIRVTGRLLLRFTAIALLASLAGCNAVLLSPSGDMAMRQRDLIIIATCLML
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCHHHHHHHHHH
LIIVPVIFLTLLFAWRYRESAPDSPYNPEWDHSTVLELAIWAAPLLIIIALGAVTWVSTH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QLDPYRPLTRLDEGRPVPTEVKPLTVEVVALDWKWLFLYPEQGIATVNELAAPVDRPIAF
CCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCHHHHHHHCCCCCCEEE
RITATSVMNAFFVPSLAGMVYAMPGMETKLHAVINKPGIYDGFSSNYSGAGFSHMRFKFH
EEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE
GMSSEDFDRWIAQAKSSGSTLSKDAYLKLAQPSEREPVQRYASVAPELYDQILNRCVDGG
CCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHCCCC
ACMADTMALDRSRGKFDPSGEICTASNTPVDSPLFAPDVVLNDGRRLLR
CHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O. [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]