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The map label for this gene is yhjE [H]

Identifier: 94314526

GI number: 94314526

Start: 2362455

End: 2363774

Strand: Reverse

Name: yhjE [H]

Synonym: Rmet_5607

Alternate gene names: 94314526

Gene position: 2363774-2362455 (Counterclockwise)

Preceding gene: 94314531

Following gene: 94314524

Centisome position: 91.62

GC content: 63.48

Gene sequence:

>1320_bases
ATGGCCAGTCTGTCCCACCAGCATCGCGCGTCGCCCACTGCACCTCCGGCTCCCGGTCATCATGACGTGGCGCCAGCCGA
GATCGCTACAGGCGTGGTGATCGGGCGCGCCTCCGAGTACTTCGACTTCTTCACGTATGGCATCGCCTCGGTGCTCGTCT
TCCCATCGGTCTACTTCCCGTTTGCGAGCGAGCTGGCCGGTCTGCTCTACAGCTTCGCGATCTTCTCCTTCGCATTCGTC
GGACGGCCGTTCGGGACGACACTGTTCATGCGAATCCAGCGACGCTGGGGCCGCGGCATCAAGCTGACGGCCTCGCTGTT
CCTGCTCGGCACCGCCACGGTGGGTATCGCGTTCCTGCCGTCATATGCGTCGATCGGCAGTTCGGCCATCTACCTGCTGG
CGCTGTTCCGCTTCCTGCAGGGCATTGCGTTTGGCGGTTCGTGGGATGGCCTGCCGTCGCTGCTGGCGCTCAATGCGCCG
GAAAACAAGCGCGGGTGGTACGCGATGGTGGGGCAGCTTGGCGCGCCGACTGGCTTCATCGTGGCGGGTGCGTTGTTCCT
GTTCCTGCGCTCGAGCCTGACGCCGGAAGAGTTCATCGATTGGGGGTGGCGTTATCCGTTCTATGTGGCCTTCGCCATCA
ACGTGGTGGCGCTGTTCGCGCGGCTGCGCCTGGTGGTCACGCATGAATACACCCGACTGCTCGAGGAGGATGAACTCGAG
CCAATCAGCACGCTGCAGATGGTCAATGCGCAGGGCTTCAACATCTTCCTCGGCGCCTTCGCGGCACTGGCCAGCTATGC
GCTGTTCCACCTCGTCACCGTGTTTCCGCTGTCATGGGTGAGCCTGCACAAGACGCAGAACATCACAGACGTGCTCGCGG
TCCAGATCGTGGGTGCGGTCATTGCGTTCATCGGCACGTTGATCTCAGGCTGGCTTGCCGACCGCATCGGCCGGCGTACC
ACGCTGGCGACAATGGCCGTCTTGATTGGCATCTTTAGCCTGTTCAGTCCGTGGCTGCTCGATGGCGGCGCGACCGGCCA
GAACCTGTTCATCCTGATCGGCTTCGGCCTGCTGGGTTTGTCGTACGGGCAGGCGGCTGGCGTGGTGACGTCGAACTTCG
AGACCCGCTATCGCTATACGGGCGCCGCGCTGACGACCGATTTCGCGTGGCTGTTCGGCGCCGCATTTGCGCCACTGGTA
GCGCTGGGACTGTCGTCGCTGTTCGGTCTGGTCGCGGTTAGTCTGTATCTGCTGTCTGGGGTGGTGGGAACGCTGGTGGC
GCTGCGGATCAACCGTGCGCTGGGGACCCCCGACGATTGA

Upstream 100 bases:

>100_bases
ATCTTTCGATTTCCAGTTGCAGTTTAGGCGCTATTCTTGTGATTGCGGGACTTTAAGTGCAGTACGACATCCTCCTCTCG
CACATCAAGGAGACTCCACG

Downstream 100 bases:

>100_bases
CCTCATCGAGCGCAAATGCCACGAACGCGCGCGCCGCGGCAGTGCGATAGGCGCCACGCCGTTGCAGTAGCGCGGCACGG
CGCGGCGGCAGCGGCAGTTC

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MASLSHQHRASPTAPPAPGHHDVAPAEIATGVVIGRASEYFDFFTYGIASVLVFPSVYFPFASELAGLLYSFAIFSFAFV
GRPFGTTLFMRIQRRWGRGIKLTASLFLLGTATVGIAFLPSYASIGSSAIYLLALFRFLQGIAFGGSWDGLPSLLALNAP
ENKRGWYAMVGQLGAPTGFIVAGALFLFLRSSLTPEEFIDWGWRYPFYVAFAINVVALFARLRLVVTHEYTRLLEEDELE
PISTLQMVNAQGFNIFLGAFAALASYALFHLVTVFPLSWVSLHKTQNITDVLAVQIVGAVIAFIGTLISGWLADRIGRRT
TLATMAVLIGIFSLFSPWLLDGGATGQNLFILIGFGLLGLSYGQAAGVVTSNFETRYRYTGAALTTDFAWLFGAAFAPLV
ALGLSSLFGLVAVSLYLLSGVVGTLVALRINRALGTPDD

Sequences:

>Translated_439_residues
MASLSHQHRASPTAPPAPGHHDVAPAEIATGVVIGRASEYFDFFTYGIASVLVFPSVYFPFASELAGLLYSFAIFSFAFV
GRPFGTTLFMRIQRRWGRGIKLTASLFLLGTATVGIAFLPSYASIGSSAIYLLALFRFLQGIAFGGSWDGLPSLLALNAP
ENKRGWYAMVGQLGAPTGFIVAGALFLFLRSSLTPEEFIDWGWRYPFYVAFAINVVALFARLRLVVTHEYTRLLEEDELE
PISTLQMVNAQGFNIFLGAFAALASYALFHLVTVFPLSWVSLHKTQNITDVLAVQIVGAVIAFIGTLISGWLADRIGRRT
TLATMAVLIGIFSLFSPWLLDGGATGQNLFILIGFGLLGLSYGQAAGVVTSNFETRYRYTGAALTTDFAWLFGAAFAPLV
ALGLSSLFGLVAVSLYLLSGVVGTLVALRINRALGTPDD
>Mature_438_residues
ASLSHQHRASPTAPPAPGHHDVAPAEIATGVVIGRASEYFDFFTYGIASVLVFPSVYFPFASELAGLLYSFAIFSFAFVG
RPFGTTLFMRIQRRWGRGIKLTASLFLLGTATVGIAFLPSYASIGSSAIYLLALFRFLQGIAFGGSWDGLPSLLALNAPE
NKRGWYAMVGQLGAPTGFIVAGALFLFLRSSLTPEEFIDWGWRYPFYVAFAINVVALFARLRLVVTHEYTRLLEEDELEP
ISTLQMVNAQGFNIFLGAFAALASYALFHLVTVFPLSWVSLHKTQNITDVLAVQIVGAVIAFIGTLISGWLADRIGRRTT
LATMAVLIGIFSLFSPWLLDGGATGQNLFILIGFGLLGLSYGQAAGVVTSNFETRYRYTGAALTTDFAWLFGAAFAPLVA
LGLSSLFGLVAVSLYLLSGVVGTLVALRINRALGTPDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789941, Length=439, Percent_Identity=35.9908883826879, Blast_Score=195, Evalue=5e-51,
Organism=Escherichia coli, GI1788292, Length=407, Percent_Identity=29.4840294840295, Blast_Score=151, Evalue=8e-38,
Organism=Escherichia coli, GI1790550, Length=430, Percent_Identity=25.8139534883721, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788942, Length=410, Percent_Identity=29.5121951219512, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 47325; Mature: 47193

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLSHQHRASPTAPPAPGHHDVAPAEIATGVVIGRASEYFDFFTYGIASVLVFPSVYFP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FASELAGLLYSFAIFSFAFVGRPFGTTLFMRIQRRWGRGIKLTASLFLLGTATVGIAFLP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHC
SYASIGSSAIYLLALFRFLQGIAFGGSWDGLPSLLALNAPENKRGWYAMVGQLGAPTGFI
CHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCHHHHHHHCCCCHHHH
VAGALFLFLRSSLTPEEFIDWGWRYPFYVAFAINVVALFARLRLVVTHEYTRLLEEDELE
HHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PISTLQMVNAQGFNIFLGAFAALASYALFHLVTVFPLSWVSLHKTQNITDVLAVQIVGAV
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IAFIGTLISGWLADRIGRRTTLATMAVLIGIFSLFSPWLLDGGATGQNLFILIGFGLLGL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHH
SYGQAAGVVTSNFETRYRYTGAALTTDFAWLFGAAFAPLVALGLSSLFGLVAVSLYLLSG
CCCCCCCCEECCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVGTLVALRINRALGTPDD
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ASLSHQHRASPTAPPAPGHHDVAPAEIATGVVIGRASEYFDFFTYGIASVLVFPSVYFP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FASELAGLLYSFAIFSFAFVGRPFGTTLFMRIQRRWGRGIKLTASLFLLGTATVGIAFLP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHC
SYASIGSSAIYLLALFRFLQGIAFGGSWDGLPSLLALNAPENKRGWYAMVGQLGAPTGFI
CHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCHHHHHHHCCCCHHHH
VAGALFLFLRSSLTPEEFIDWGWRYPFYVAFAINVVALFARLRLVVTHEYTRLLEEDELE
HHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PISTLQMVNAQGFNIFLGAFAALASYALFHLVTVFPLSWVSLHKTQNITDVLAVQIVGAV
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IAFIGTLISGWLADRIGRRTTLATMAVLIGIFSLFSPWLLDGGATGQNLFILIGFGLLGL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHH
SYGQAAGVVTSNFETRYRYTGAALTTDFAWLFGAAFAPLVALGLSSLFGLVAVSLYLLSG
CCCCCCCCEECCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVGTLVALRINRALGTPDD
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]