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The map label for this gene is 94314515

Identifier: 94314515

GI number: 94314515

Start: 2350361

End: 2351260

Strand: Direct

Name: 94314515

Synonym: Rmet_5596

Alternate gene names: NA

Gene position: 2350361-2351260 (Clockwise)

Preceding gene: 94314514

Following gene: 94314518

Centisome position: 91.1

GC content: 65.56

Gene sequence:

>900_bases
TTGTCGACGAATTCGGATTACCAGGCTGGTGTGGCACATGGCCGGTACCCGCGCGCCCTGATACTGTGGCTCGCCACGGC
GATGTTCGCGCTGGTGGCCTTGCTGGCCGCGCCGCGAGCCCACGCCCAGACGCCGGCCCCGCTGGCCGAGTGGCAGTATT
CGGTAGGCGTGCCGCTGGAAAAGCTGTTCGAGGGGCCCCCGCCCGACTGGACGGTTCGCCTGGGCATGGCAGCCCGCATC
AGCCCGTATTACGACGGCACCGGCAACTACTATCCGCTGGCGGGCCCCGCGATCGACATCCGGTATCGCGATCAAGGCTT
CCTGTCCACTGGCGAAGGCCTTGGCTGGAACATCGTCCACTCCGACCATTGGCGCGCCGGTATTGCGCTGACCTATGACT
TCGGCCGACGCGAAAAGCACGACCACGACCATCTGGCCGGACTCGGCAACATCGGGATGGCGGTCGAGTCGAAGCTGTTC
GCGGAGTACGTGGTCTCGAAGGAGTTTCCGCTTGTGATTCGCGCGAACGCGCGGCGCCAGTTCGGGGGTGCCAACGGGTG
GCTGGGCGACCTCGGCGCGTATATGCCGCTGCCGGGCAGTTCGGACAAGTTCGCCTGGTTCGCGGGTCCGACCATGACGG
TCGCGGATTCGGCCTACATGAGTCGCTGGTACGGTGTCACGGCGGAGCAATCGGCGCGTTCAGGACTGCCCCAGTACCAT
GCCGGCGCCGGCATCCGCTCATACGGCGGGGGGGTATCCGCGATGTGGTTCTTCGGCAAGCACTGGTTCGCCACGGCCGA
TTTCGGCATCGCGGCGCTCGTCGGCGATGCGCGCAACAGCCCGGTCGTATCTCACTCGGCCAACATGACCGGCGATATTT
CGATCATGTACGAGTTCTGA

Upstream 100 bases:

>100_bases
ATGATGACTTTGCGTCATCCGCACGTCCGCCAGCGCCGTTACACCGGTTTTGCATCGCACCTTCCCCCATGGGAGGTGCC
AGAAGAAACGGAGTGATTAC

Downstream 100 bases:

>100_bases
CCCAATAGCTGCCGATCAGGCGGTCACTCGGCCGGCCGCCGCAGATAGCTCTCCACCACGCGGCGCAGGCCTGGCAGCTT
CCCCGTGAAGAAGTGTCCGG

Product: putative outer membrane lytic transglycosylase MltA-interacting MipA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSTNSDYQAGVAHGRYPRALILWLATAMFALVALLAAPRAHAQTPAPLAEWQYSVGVPLEKLFEGPPPDWTVRLGMAARI
SPYYDGTGNYYPLAGPAIDIRYRDQGFLSTGEGLGWNIVHSDHWRAGIALTYDFGRREKHDHDHLAGLGNIGMAVESKLF
AEYVVSKEFPLVIRANARRQFGGANGWLGDLGAYMPLPGSSDKFAWFAGPTMTVADSAYMSRWYGVTAEQSARSGLPQYH
AGAGIRSYGGGVSAMWFFGKHWFATADFGIAALVGDARNSPVVSHSANMTGDISIMYEF

Sequences:

>Translated_299_residues
MSTNSDYQAGVAHGRYPRALILWLATAMFALVALLAAPRAHAQTPAPLAEWQYSVGVPLEKLFEGPPPDWTVRLGMAARI
SPYYDGTGNYYPLAGPAIDIRYRDQGFLSTGEGLGWNIVHSDHWRAGIALTYDFGRREKHDHDHLAGLGNIGMAVESKLF
AEYVVSKEFPLVIRANARRQFGGANGWLGDLGAYMPLPGSSDKFAWFAGPTMTVADSAYMSRWYGVTAEQSARSGLPQYH
AGAGIRSYGGGVSAMWFFGKHWFATADFGIAALVGDARNSPVVSHSANMTGDISIMYEF
>Mature_298_residues
STNSDYQAGVAHGRYPRALILWLATAMFALVALLAAPRAHAQTPAPLAEWQYSVGVPLEKLFEGPPPDWTVRLGMAARIS
PYYDGTGNYYPLAGPAIDIRYRDQGFLSTGEGLGWNIVHSDHWRAGIALTYDFGRREKHDHDHLAGLGNIGMAVESKLFA
EYVVSKEFPLVIRANARRQFGGANGWLGDLGAYMPLPGSSDKFAWFAGPTMTVADSAYMSRWYGVTAEQSARSGLPQYHA
GAGIRSYGGGVSAMWFFGKHWFATADFGIAALVGDARNSPVVSHSANMTGDISIMYEF

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 32550; Mature: 32419

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNSDYQAGVAHGRYPRALILWLATAMFALVALLAAPRAHAQTPAPLAEWQYSVGVPLE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEECCCCHH
KLFEGPPPDWTVRLGMAARISPYYDGTGNYYPLAGPAIDIRYRDQGFLSTGEGLGWNIVH
HHHCCCCCCEEEEECEEEEECCEECCCCCEEECCCCEEEEEECCCCCEECCCCCCEEEEE
SDHWRAGIALTYDFGRREKHDHDHLAGLGNIGMAVESKLFAEYVVSKEFPLVIRANARRQ
CCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHH
FGGANGWLGDLGAYMPLPGSSDKFAWFAGPTMTVADSAYMSRWYGVTAEQSARSGLPQYH
CCCCCCCHHHCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHCCCCCHHHHHCCCCCHH
AGAGIRSYGGGVSAMWFFGKHWFATADFGIAALVGDARNSPVVSHSANMTGDISIMYEF
CCCCCHHCCCCEEEEEECCCCEEEECCCCEEEEECCCCCCCEEECCCCCCEEEEEEEEC
>Mature Secondary Structure 
STNSDYQAGVAHGRYPRALILWLATAMFALVALLAAPRAHAQTPAPLAEWQYSVGVPLE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEECCCCHH
KLFEGPPPDWTVRLGMAARISPYYDGTGNYYPLAGPAIDIRYRDQGFLSTGEGLGWNIVH
HHHCCCCCCEEEEECEEEEECCEECCCCCEEECCCCEEEEEECCCCCEECCCCCCEEEEE
SDHWRAGIALTYDFGRREKHDHDHLAGLGNIGMAVESKLFAEYVVSKEFPLVIRANARRQ
CCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHH
FGGANGWLGDLGAYMPLPGSSDKFAWFAGPTMTVADSAYMSRWYGVTAEQSARSGLPQYH
CCCCCCCHHHCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHCCCCCHHHHHCCCCCHH
AGAGIRSYGGGVSAMWFFGKHWFATADFGIAALVGDARNSPVVSHSANMTGDISIMYEF
CCCCCHHCCCCEEEEEECCCCEEEECCCCEEEEECCCCCCCEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]