| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314485
Identifier: 94314485
GI number: 94314485
Start: 2320076
End: 2320750
Strand: Reverse
Name: 94314485
Synonym: Rmet_5566
Alternate gene names: NA
Gene position: 2320750-2320076 (Counterclockwise)
Preceding gene: 94314486
Following gene: 291481589
Centisome position: 89.95
GC content: 55.11
Gene sequence:
>675_bases ATGAGCGCGAACCTGCCCACCCTGAGAAAGACGATGCCGGCAGTAGCAGCGACTGAGTTTCCCGAGTTCGCATATCTGGT AAGCGACTTTGGCCATTTTGCGCCTCGCGGTTCTGAATATGGAGTGCAAGCGCCCGCCGGAATCAGCATTTATACCGCTA TTGTCAGAGTGCCAATTACAGCGTCTTACGTCCATTGCATTCCCGAGGACGCAGATATTGTTGGCTTGAAGTTTGAGGCT ATTCAGGGAAAGTACGGACGCGTACTAGGCATCAGATTCCAGTTTGAGAGACTTGAAGTCTCCGTGTTCGCTGCCATGGA TGATTCGGCGGCCTCATCCGCAGTCTTAGATTGGCGGCACTCAGGCATCGTGCCGTTCATCTTTGGTACCCAACACGGCG AAGTGTGGAGGTACCACCTGAAGACGTGCCCGTTCAGCGAGGACGATTGGGCAGAAGCAAGTCGCGTGCTATTGGCGCCA GAGAACCAAGGCCAGCAACCAGAGAAGACGTGGGACGATATGTGCCGGCTTGCTGATGAGCAAACGGCGGTCGTGCCGGC CGATGCCATCAGCGAGGGTGAAGACGTCATGCACACACTCGGCTTCCCACACAATCGTCCGCTCTCGTTCGCTGGAATAT TTCCCATTAAGCAAAGGCACATCGGCGTGTGTTAG
Upstream 100 bases:
>100_bases CCCTGAGTTCTACCTGGCGTACTGGTGGCTGAGCTGCTGCTTCGGGCACGCCTCAAAAGGCGGTGCCGTGCAGATGAATT GGGTGGAGGCCTGAATAGCA
Downstream 100 bases:
>100_bases TTCAACCTCTGGCTTATTGTCCATGCCGGCGAGCCCGGCCGGTATGGACGACCGACGATGCAATCGGCGATGCAGCGTTG AGCCGGGGCCCAGAGCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSANLPTLRKTMPAVAATEFPEFAYLVSDFGHFAPRGSEYGVQAPAGISIYTAIVRVPITASYVHCIPEDADIVGLKFEA IQGKYGRVLGIRFQFERLEVSVFAAMDDSAASSAVLDWRHSGIVPFIFGTQHGEVWRYHLKTCPFSEDDWAEASRVLLAP ENQGQQPEKTWDDMCRLADEQTAVVPADAISEGEDVMHTLGFPHNRPLSFAGIFPIKQRHIGVC
Sequences:
>Translated_224_residues MSANLPTLRKTMPAVAATEFPEFAYLVSDFGHFAPRGSEYGVQAPAGISIYTAIVRVPITASYVHCIPEDADIVGLKFEA IQGKYGRVLGIRFQFERLEVSVFAAMDDSAASSAVLDWRHSGIVPFIFGTQHGEVWRYHLKTCPFSEDDWAEASRVLLAP ENQGQQPEKTWDDMCRLADEQTAVVPADAISEGEDVMHTLGFPHNRPLSFAGIFPIKQRHIGVC >Mature_223_residues SANLPTLRKTMPAVAATEFPEFAYLVSDFGHFAPRGSEYGVQAPAGISIYTAIVRVPITASYVHCIPEDADIVGLKFEAI QGKYGRVLGIRFQFERLEVSVFAAMDDSAASSAVLDWRHSGIVPFIFGTQHGEVWRYHLKTCPFSEDDWAEASRVLLAPE NQGQQPEKTWDDMCRLADEQTAVVPADAISEGEDVMHTLGFPHNRPLSFAGIFPIKQRHIGVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24756; Mature: 24625
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANLPTLRKTMPAVAATEFPEFAYLVSDFGHFAPRGSEYGVQAPAGISIYTAIVRVPIT CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEHHCCCC ASYVHCIPEDADIVGLKFEAIQGKYGRVLGIRFQFERLEVSVFAAMDDSAASSAVLDWRH EEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEEEEEEEEEEEEEECCCCCCHHEEEHHC SGIVPFIFGTQHGEVWRYHLKTCPFSEDDWAEASRVLLAPENQGQQPEKTWDDMCRLADE CCEEEEEEECCCCCEEEEEEECCCCCCCCHHCCCEEEECCCCCCCCCHHHHHHHHHHCCC QTAVVPADAISEGEDVMHTLGFPHNRPLSFAGIFPIKQRHIGVC CCEEECHHHHCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure SANLPTLRKTMPAVAATEFPEFAYLVSDFGHFAPRGSEYGVQAPAGISIYTAIVRVPIT CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEHHCCCC ASYVHCIPEDADIVGLKFEAIQGKYGRVLGIRFQFERLEVSVFAAMDDSAASSAVLDWRH EEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEEEEEEEEEEEEEECCCCCCHHEEEHHC SGIVPFIFGTQHGEVWRYHLKTCPFSEDDWAEASRVLLAPENQGQQPEKTWDDMCRLADE CCEEEEEEECCCCCEEEEEEECCCCCCCCHHCCCEEEECCCCCCCCCHHHHHHHHHHCCC QTAVVPADAISEGEDVMHTLGFPHNRPLSFAGIFPIKQRHIGVC CCEEECHHHHCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA