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The map label for this gene is 94314359

Identifier: 94314359

GI number: 94314359

Start: 2190175

End: 2190690

Strand: Reverse

Name: 94314359

Synonym: Rmet_5440

Alternate gene names: NA

Gene position: 2190690-2190175 (Counterclockwise)

Preceding gene: 94314360

Following gene: 94314358

Centisome position: 84.91

GC content: 63.57

Gene sequence:

>516_bases
ATGTCCGCATGGTCCGCATGGTCCGCATGGTCCGCATGGTCAGAAAGGCCTGAACTTCCTAGCTCGACATTCGAAGTGGA
AAAAGGCTGGATCGACGAGTACGGTCATATGAACGCTGCCCGGTATGTGGAGGTGTTCGACCGCGAGGGCTTCAAGCTGC
TTGAGCAACTCGGCGTGGGGCTCGGCTACACCGAGGCCACCCGCTGCGGGATCTACACTGTCGACATCCATGTGGCCTAC
TACCGCGAACTGCTGGTCGGATCTCCGGTTGTGCTGCGCGTGCGCGCATTGCAGTCCGACGACAAGCGTCTGCTTTGCCT
GATGGAACTCTCCCATGCCACCGAGGGATACGTGGCGGCCACCATGGAACAGCTCTCGGTACACGTGAACCTGGAAACGC
GCAGGGCGGCACCGTTCCCCGGGGCGCTTGCCGAGCAGCTGGCGCTCGCCGTCAAGGCTCACGCCGCGCATCCGCTGCCG
GCCGGCTGCCGCACCCTGCTGTCCCTGAAGCGCTGA

Upstream 100 bases:

>100_bases
GAGGATCAGCGGGGCAGCCGAATACTGAGGCATTGGCGTACCATTTGCGGACAACAACATCGGCAGCCAATGTGTAAGGC
TGCGCAGATCAGGAGACGGC

Downstream 100 bases:

>100_bases
GCGCGAACACCCGTCAGCGCCGAAATTCGTCGCTTTCGACGATTACCTGCCGGGCCAGCGCGGCCGACACTGCTGGCGGG
AAAGCCAACGACGAAAAGCC

Product: putative thioesterase superfamily

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily Protein; 3-Hydroxyacyl-CoA Dehydrogenase C-Terminal Domain Family; 3-Hydroxyacyl-CoA Dehydrogenase Protein; Thioesterase-Like; Thioesterase Family Protein; Thioesterase FcbC-Like; Thioesterase-Like Protein

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSAWSAWSAWSAWSERPELPSSTFEVEKGWIDEYGHMNAARYVEVFDREGFKLLEQLGVGLGYTEATRCGIYTVDIHVAY
YRELLVGSPVVLRVRALQSDDKRLLCLMELSHATEGYVAATMEQLSVHVNLETRRAAPFPGALAEQLALAVKAHAAHPLP
AGCRTLLSLKR

Sequences:

>Translated_171_residues
MSAWSAWSAWSAWSERPELPSSTFEVEKGWIDEYGHMNAARYVEVFDREGFKLLEQLGVGLGYTEATRCGIYTVDIHVAY
YRELLVGSPVVLRVRALQSDDKRLLCLMELSHATEGYVAATMEQLSVHVNLETRRAAPFPGALAEQLALAVKAHAAHPLP
AGCRTLLSLKR
>Mature_170_residues
SAWSAWSAWSAWSERPELPSSTFEVEKGWIDEYGHMNAARYVEVFDREGFKLLEQLGVGLGYTEATRCGIYTVDIHVAYY
RELLVGSPVVLRVRALQSDDKRLLCLMELSHATEGYVAATMEQLSVHVNLETRRAAPFPGALAEQLALAVKAHAAHPLPA
GCRTLLSLKR

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19047; Mature: 18916

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAWSAWSAWSAWSERPELPSSTFEVEKGWIDEYGHMNAARYVEVFDREGFKLLEQLGVG
CCCCCCCHHHHHHCCCCCCCCCCEECCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHCCC
LGYTEATRCGIYTVDIHVAYYRELLVGSPVVLRVRALQSDDKRLLCLMELSHATEGYVAA
CCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHEEEEECCCCCCEEEEEEEHHCCCCCHHHH
TMEQLSVHVNLETRRAAPFPGALAEQLALAVKAHAAHPLPAGCRTLLSLKR
HHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SAWSAWSAWSAWSERPELPSSTFEVEKGWIDEYGHMNAARYVEVFDREGFKLLEQLGVG
CCCCCCHHHHHHCCCCCCCCCCEECCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHCCC
LGYTEATRCGIYTVDIHVAYYRELLVGSPVVLRVRALQSDDKRLLCLMELSHATEGYVAA
CCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHEEEEECCCCCCEEEEEEEHHCCCCCHHHH
TMEQLSVHVNLETRRAAPFPGALAEQLALAVKAHAAHPLPAGCRTLLSLKR
HHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA