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The map label for this gene is yajR [C]

Identifier: 94314270

GI number: 94314270

Start: 2071741

End: 2072955

Strand: Direct

Name: yajR [C]

Synonym: Rmet_5351

Alternate gene names: 94314270

Gene position: 2071741-2072955 (Clockwise)

Preceding gene: 94314269

Following gene: 94314271

Centisome position: 80.3

GC content: 68.07

Gene sequence:

>1215_bases
ATGGCAACGCGCGCTCCCGCCAGCACCCTGCGACAGATCCCGTCCGGCATCTGGATGCTTGGATGCGTCAGCCTGTTGAT
GGACATCTCCTCGGAGATCATCCACAGCCTGCTGCCCGTCTTCATGGTCACCACGCTCGGCGCTAGCGCGCTGGCCGTGG
GGCTGATCGAAGGCGCGGCCGAAGCCACCGCCCTGATCGTCAAGGTCTTCTCGGGCGTCCTCAGTGATTATCTCGGCAAG
CGCAAGGCGCTGGCCGTGCTCGGCTATGGGCTCGGCGCGCTGTCCAAGCCGCTCTTCGCGGTGGCACCTGGCGTCGGCAC
GATACTGGCGGCACGCCTGTCCGACCGCATCGGCAAGGGCATTCGCGGCGCGCCCCGCGATGCGCTGGTGGCCGATATCG
CGCCCGCCCATCTGCGCGGCGCGGCGTTCGGGCTGCGGCAGGCACTCGACACGGTTGGCGCATTCCTGGGCCCGCTGATC
GCCATCGGGCTGATGATGCTCTGGGCGAACGACTTCCGCGCCATCTTCTGGGTGGCGGTGGTGCCCGGCGTGCTGTCCGT
TGCCTTGCTCGCATTCGGCGTGAAGGAACCGCAAACCCACACCGGAGACAAGCGTGTGAATCCGATCCGGCGCGCCAACC
TGGCGCGGCTCGGTCCGGCGTACTGGGGCGTGGTTGCCGTGGGCACGGCCTTCGCGCTGGCCCGATTCAGCGAGGCATTC
CTGATCCTGCGCGTCCAGCAGGAAGGGCTACCGCTGTTTATGGCGCCGCTGGTGCTGGTAACGATGAACGCGGTGTTCGC
CGTCACGGCCTATCCGTTCGGCAAGCTCGCGGACAACTGCAGCCATGACAAGCTCCTGGTGGCTGGCCTGGCCGTGCTGA
TCGTCGCGGATACGGTGCTCGCAGTCGGCTCTCACTGGAGCATCGCACTGGTCGGGGTCGCGCTGTGGGGCCTGCATATG
GGCATGACCCAGGGATTGCTGGCCACGATGGTCGCCGATGCCGCGCCAGCGGATCTGCGTGGCACTGCATTCGGCGTTTT
CAATCTGGCCAGCGGGCTGGCGTTGCTGGCAGCCAGTGTCATGGCCGGCTGGCTGTGGGACCGGCACGGTGCGGCCGCCA
CCTTCCACGCGGGCGCGGGCTTCTGCGTGCTGACCATCGCACTGCTGATCCACCGGCTTCGCAACCGCCCCGCCTCCGGC
GCGGCCACCCGCTGA

Upstream 100 bases:

>100_bases
GCTCGCGAATCCCGAACTTCAGGGCCGCTAAGCCAGGCGCGGCCTTCCTGTAGTAAAAAGGCGGGATCGTGCGCGTCCGC
GCACGCCATCGACCGATGCC

Downstream 100 bases:

>100_bases
GGTTCGCTGAGATTCGCCGAGGTTTGCTGAGCGCCTTGCGAAGACAACCTTCCTGTTCGTGTTGCACAACTTACGGATTG
TCACGACTCCGGCGTCAACG

Product: major facilitator superfamily transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MATRAPASTLRQIPSGIWMLGCVSLLMDISSEIIHSLLPVFMVTTLGASALAVGLIEGAAEATALIVKVFSGVLSDYLGK
RKALAVLGYGLGALSKPLFAVAPGVGTILAARLSDRIGKGIRGAPRDALVADIAPAHLRGAAFGLRQALDTVGAFLGPLI
AIGLMMLWANDFRAIFWVAVVPGVLSVALLAFGVKEPQTHTGDKRVNPIRRANLARLGPAYWGVVAVGTAFALARFSEAF
LILRVQQEGLPLFMAPLVLVTMNAVFAVTAYPFGKLADNCSHDKLLVAGLAVLIVADTVLAVGSHWSIALVGVALWGLHM
GMTQGLLATMVADAAPADLRGTAFGVFNLASGLALLAASVMAGWLWDRHGAAATFHAGAGFCVLTIALLIHRLRNRPASG
AATR

Sequences:

>Translated_404_residues
MATRAPASTLRQIPSGIWMLGCVSLLMDISSEIIHSLLPVFMVTTLGASALAVGLIEGAAEATALIVKVFSGVLSDYLGK
RKALAVLGYGLGALSKPLFAVAPGVGTILAARLSDRIGKGIRGAPRDALVADIAPAHLRGAAFGLRQALDTVGAFLGPLI
AIGLMMLWANDFRAIFWVAVVPGVLSVALLAFGVKEPQTHTGDKRVNPIRRANLARLGPAYWGVVAVGTAFALARFSEAF
LILRVQQEGLPLFMAPLVLVTMNAVFAVTAYPFGKLADNCSHDKLLVAGLAVLIVADTVLAVGSHWSIALVGVALWGLHM
GMTQGLLATMVADAAPADLRGTAFGVFNLASGLALLAASVMAGWLWDRHGAAATFHAGAGFCVLTIALLIHRLRNRPASG
AATR
>Mature_403_residues
ATRAPASTLRQIPSGIWMLGCVSLLMDISSEIIHSLLPVFMVTTLGASALAVGLIEGAAEATALIVKVFSGVLSDYLGKR
KALAVLGYGLGALSKPLFAVAPGVGTILAARLSDRIGKGIRGAPRDALVADIAPAHLRGAAFGLRQALDTVGAFLGPLIA
IGLMMLWANDFRAIFWVAVVPGVLSVALLAFGVKEPQTHTGDKRVNPIRRANLARLGPAYWGVVAVGTAFALARFSEAFL
ILRVQQEGLPLFMAPLVLVTMNAVFAVTAYPFGKLADNCSHDKLLVAGLAVLIVADTVLAVGSHWSIALVGVALWGLHMG
MTQGLLATMVADAAPADLRGTAFGVFNLASGLALLAASVMAGWLWDRHGAAATFHAGAGFCVLTIALLIHRLRNRPASGA
ATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41960; Mature: 41829

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRAPASTLRQIPSGIWMLGCVSLLMDISSEIIHSLLPVFMVTTLGASALAVGLIEGAA
CCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
EATALIVKVFSGVLSDYLGKRKALAVLGYGLGALSKPLFAVAPGVGTILAARLSDRIGKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCC
IRGAPRDALVADIAPAHLRGAAFGLRQALDTVGAFLGPLIAIGLMMLWANDFRAIFWVAV
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPGVLSVALLAFGVKEPQTHTGDKRVNPIRRANLARLGPAYWGVVAVGTAFALARFSEAF
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LILRVQQEGLPLFMAPLVLVTMNAVFAVTAYPFGKLADNCSHDKLLVAGLAVLIVADTVL
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
AVGSHWSIALVGVALWGLHMGMTQGLLATMVADAAPADLRGTAFGVFNLASGLALLAASV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
MAGWLWDRHGAAATFHAGAGFCVLTIALLIHRLRNRPASGAATR
HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ATRAPASTLRQIPSGIWMLGCVSLLMDISSEIIHSLLPVFMVTTLGASALAVGLIEGAA
CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
EATALIVKVFSGVLSDYLGKRKALAVLGYGLGALSKPLFAVAPGVGTILAARLSDRIGKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCC
IRGAPRDALVADIAPAHLRGAAFGLRQALDTVGAFLGPLIAIGLMMLWANDFRAIFWVAV
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPGVLSVALLAFGVKEPQTHTGDKRVNPIRRANLARLGPAYWGVVAVGTAFALARFSEAF
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LILRVQQEGLPLFMAPLVLVTMNAVFAVTAYPFGKLADNCSHDKLLVAGLAVLIVADTVL
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
AVGSHWSIALVGVALWGLHMGMTQGLLATMVADAAPADLRGTAFGVFNLASGLALLAASV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
MAGWLWDRHGAAATFHAGAGFCVLTIALLIHRLRNRPASGAATR
HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]