Click here to switch to the map view.

The map label for this gene is 94314257

Identifier: 94314257

GI number: 94314257

Start: 2049383

End: 2049820

Strand: Reverse

Name: 94314257

Synonym: Rmet_5338

Alternate gene names: NA

Gene position: 2049820-2049383 (Counterclockwise)

Preceding gene: 94314258

Following gene: 94314256

Centisome position: 79.45

GC content: 61.87

Gene sequence:

>438_bases
ATGATGAGCATGGTCACGCTGCGCAAGGCAGCGTTTTTGTCGGCGGCCGGCCTCGTGCTGGCCGGTTGTGCGAGTGGGCC
GAAGCCCCTCTATCAATGGGAGGGGTATCAGACCCAGGTCTATCAGTACCTCAAGGACGGCGCGAAGGAGGAGCAGGTGC
TGGCGCTGGAAAGCGGGCTGGACAAGATGAAGGCGAAGGGTGGCTCGGCGCCGCCGGGGTATCACGCCCAGCTTGGCATG
TTGTATCTGAATCTGGGCAAGGGCGACCAGATGGTGAAGGAGTTCCAGACCGAGAAGACGCTGTTCCCGGAAGCCACACC
CTATATGGATTTCCTGATGCGCAACGTGAAGACCGATAAGCGGCCCGACACCAGGGCTGCGGCCAAGGCTGACACGACGG
AAGCGAAGTCCGACGCCACCACCGGGAGCGCCAAATGA

Upstream 100 bases:

>100_bases
GTGAACAACCTGGTGGGCGCCATCGAATCCGGCTTGTGGAAGCCGCAGCAGTAATCGCTCTTCTTAGTAATCGCTGTTCT
TTGTACGACGGGAAGAAAAA

Downstream 100 bases:

>100_bases
TGCGTCGAATCCTGACCTATATCGCGGGCCTTGGTGCGGTGACGCTGTTCGCAGGCTGTGCCGTGCCGACCAAGCAGATT
GACTACTCGGCGTACAAGGC

Product: putative lipoprotein

Products: NA

Alternate protein names: Integrase/Recombinase; Periplasmic Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MMSMVTLRKAAFLSAAGLVLAGCASGPKPLYQWEGYQTQVYQYLKDGAKEEQVLALESGLDKMKAKGGSAPPGYHAQLGM
LYLNLGKGDQMVKEFQTEKTLFPEATPYMDFLMRNVKTDKRPDTRAAAKADTTEAKSDATTGSAK

Sequences:

>Translated_145_residues
MMSMVTLRKAAFLSAAGLVLAGCASGPKPLYQWEGYQTQVYQYLKDGAKEEQVLALESGLDKMKAKGGSAPPGYHAQLGM
LYLNLGKGDQMVKEFQTEKTLFPEATPYMDFLMRNVKTDKRPDTRAAAKADTTEAKSDATTGSAK
>Mature_145_residues
MMSMVTLRKAAFLSAAGLVLAGCASGPKPLYQWEGYQTQVYQYLKDGAKEEQVLALESGLDKMKAKGGSAPPGYHAQLGM
LYLNLGKGDQMVKEFQTEKTLFPEATPYMDFLMRNVKTDKRPDTRAAAKADTTEAKSDATTGSAK

Specific function: Unknown

COG id: COG4259

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15765; Mature: 15765

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSMVTLRKAAFLSAAGLVLAGCASGPKPLYQWEGYQTQVYQYLKDGAKEEQVLALESGL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
DKMKAKGGSAPPGYHAQLGMLYLNLGKGDQMVKEFQTEKTLFPEATPYMDFLMRNVKTDK
HHHHHCCCCCCCCCHHEEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
RPDTRAAAKADTTEAKSDATTGSAK
CCCCHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSMVTLRKAAFLSAAGLVLAGCASGPKPLYQWEGYQTQVYQYLKDGAKEEQVLALESGL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
DKMKAKGGSAPPGYHAQLGMLYLNLGKGDQMVKEFQTEKTLFPEATPYMDFLMRNVKTDK
HHHHHCCCCCCCCCHHEEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
RPDTRAAAKADTTEAKSDATTGSAK
CCCCHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA