Click here to switch to the map view.

The map label for this gene is yhiD [C]

Identifier: 94314253

GI number: 94314253

Start: 2046113

End: 2046835

Strand: Direct

Name: yhiD [C]

Synonym: Rmet_5334

Alternate gene names: 94314253

Gene position: 2046113-2046835 (Clockwise)

Preceding gene: 94314251

Following gene: 94314255

Centisome position: 79.3

GC content: 64.87

Gene sequence:

>723_bases
ATGTCCATCGAAGCCATCCAGAACATCAACCTAGAGTCGCTCCTCGACACCAGCATCAGCCTGGTTACCGCCTTCGTGCT
TGGCGGGGTCATCGGCTATGAACGCCAGTACCGCCAGCGCACCGCCGGCCTGCGCACCAACGTGCTGGTCGCCGTGGGCG
CGGCCATTTTCGTCGACATGGCCAACCGGCTGGCCGGCCACGACGGCGCGGTGCGCGTGGTGGCCTACGTGGTATCCGGC
ATCGGCTTTCTTGGTGCAGGCGTGATCATGCGCGAGGAAGGCAATGTGCGCGGCCTGAACACCGCAGCCACGCTGTGGGG
CTCCGCCGCGGTCGGCGCCAGCGCGGGCGCAGACCTGATCATCGAGGCCGGCTTGGGCAGCATGTTCGTGCTCGCCGCCA
ACACGCTGCTGCGTCCCGTGGTCAATCGCATCAACCAGCAGCCAATCGACACGCCTGCGGTCGAGGTGACCAACACGGTC
TACGTGATCACGCCGCGCCATCGCCAGAAAGAGGCATTGCGGCTGCTGTCGGACATGCTGGAAGCCAGCAACCATCCCAC
GCGCGATCTGGTGGTTCACGCATTCGGCGCGAACGATATCGAGATCGAAGCCGTGCTCATGGCCACTTCAGTCGACGGCG
ACGAGCTGGATGCCGTGGTGGCGCGGCTTTCGGCATGTGAAGCGGTAACCCAGGCGTTCTGGAGTCCGAGCACCACGGAA
TAG

Upstream 100 bases:

>100_bases
ATCCGCACGCCAGTTGCACGCCACGGCACGCACGTGCCGTGTCCCGCCACATGCCAGCCACGGCTGCCATGTGGCGTCAT
GATTTCCACATCCGTCGAGC

Downstream 100 bases:

>100_bases
CGGCGCCCGAAGGCGCCGCCAGAGTGAACCCCGCGCCGTTCAGCGATCGTTGCGGATCGGCCCGTACTCGACGGGCACCC
ATGTATAGCCGACCTGCTCG

Product: MgtC/SapB family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSIEAIQNINLESLLDTSISLVTAFVLGGVIGYERQYRQRTAGLRTNVLVAVGAAIFVDMANRLAGHDGAVRVVAYVVSG
IGFLGAGVIMREEGNVRGLNTAATLWGSAAVGASAGADLIIEAGLGSMFVLAANTLLRPVVNRINQQPIDTPAVEVTNTV
YVITPRHRQKEALRLLSDMLEASNHPTRDLVVHAFGANDIEIEAVLMATSVDGDELDAVVARLSACEAVTQAFWSPSTTE

Sequences:

>Translated_240_residues
MSIEAIQNINLESLLDTSISLVTAFVLGGVIGYERQYRQRTAGLRTNVLVAVGAAIFVDMANRLAGHDGAVRVVAYVVSG
IGFLGAGVIMREEGNVRGLNTAATLWGSAAVGASAGADLIIEAGLGSMFVLAANTLLRPVVNRINQQPIDTPAVEVTNTV
YVITPRHRQKEALRLLSDMLEASNHPTRDLVVHAFGANDIEIEAVLMATSVDGDELDAVVARLSACEAVTQAFWSPSTTE
>Mature_239_residues
SIEAIQNINLESLLDTSISLVTAFVLGGVIGYERQYRQRTAGLRTNVLVAVGAAIFVDMANRLAGHDGAVRVVAYVVSGI
GFLGAGVIMREEGNVRGLNTAATLWGSAAVGASAGADLIIEAGLGSMFVLAANTLLRPVVNRINQQPIDTPAVEVTNTVY
VITPRHRQKEALRLLSDMLEASNHPTRDLVVHAFGANDIEIEAVLMATSVDGDELDAVVARLSACEAVTQAFWSPSTTE

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=188, Percent_Identity=33.5106382978723, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 25370; Mature: 25239

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEAIQNINLESLLDTSISLVTAFVLGGVIGYERQYRQRTAGLRTNVLVAVGAAIFVDM
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ANRLAGHDGAVRVVAYVVSGIGFLGAGVIMREEGNVRGLNTAATLWGSAAVGASAGADLI
HHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHCCHHCCCCCCCCEE
IEAGLGSMFVLAANTLLRPVVNRINQQPIDTPAVEVTNTVYVITPRHRQKEALRLLSDML
EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECEEEEEECCHHHHHHHHHHHHHH
EASNHPTRDLVVHAFGANDIEIEAVLMATSVDGDELDAVVARLSACEAVTQAFWSPSTTE
HHCCCCCHHEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIEAIQNINLESLLDTSISLVTAFVLGGVIGYERQYRQRTAGLRTNVLVAVGAAIFVDM
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ANRLAGHDGAVRVVAYVVSGIGFLGAGVIMREEGNVRGLNTAATLWGSAAVGASAGADLI
HHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHCCHHCCCCCCCCEE
IEAGLGSMFVLAANTLLRPVVNRINQQPIDTPAVEVTNTVYVITPRHRQKEALRLLSDML
EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECEEEEEECCHHHHHHHHHHHHHH
EASNHPTRDLVVHAFGANDIEIEAVLMATSVDGDELDAVVARLSACEAVTQAFWSPSTTE
HHCCCCCHHEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]