Click here to switch to the map view.

The map label for this gene is 94314234

Identifier: 94314234

GI number: 94314234

Start: 2022282

End: 2023901

Strand: Direct

Name: 94314234

Synonym: Rmet_5315

Alternate gene names: NA

Gene position: 2022282-2023901 (Clockwise)

Preceding gene: 94314233

Following gene: 94314235

Centisome position: 78.38

GC content: 69.01

Gene sequence:

>1620_bases
ATGACGCAATCCGCCTCGACGGCAAACGCTCCCGCCTCCACAGGTACCTTCGCGCCGCTTGCGCAATCGACCTTCGCGGT
CCTGTGGGTAGCGACGATCCTCGGCAATATCGGCAGCTTCATGCGCGACGTCGCCAGCGCATGGCTGGCCACCGACCTGT
CGACCTCGCCGGCCGCGGTGGCCACCATCCAGGCTGCATCGACGCTGCCAGTGTTCCTGCTCGCGATTCCCGCCGGCGTG
CTGTCCGACATCCTTGACCGCCGCCGCTTCCTGATCGTGATCCAGCTCTGCCTGGCCTTGGTCAGCGGCTCGCTGATGCT
GCTGGCATGGCGACAGTCGCTGACGATCGAACTCCTGATCGCGCTGGCGTTCGCCGGCGGCATCGGTTCGGCGATGATGG
GGCCGACCTGGCAGTCGATCGTGCCGGAACTGGTTCCCGCCAACACGCTGCGGCAGGCCGTGGCGCTCAACTCGCTTGGC
GTGAACATCGCGCGCGCCATCGGGCCGGCCACCGGCGGCCTGCTGCTGGCTGCGTTCGGCGCGGCCGCGACTTACGGCGT
GGACCTGCTCAGCTACGTGTTCGTGGTTGCCGCGCTGATCTGGTGGCATCGACCCCAGCGACCGGTCGACCCGCTACGCG
AGCACTTCTTCAGCGCGGCCCGCGCCGGGCTGCGTTTCACGCGGGCGCACAGCAAGCTCCATGTCGTGCTGGCCCGTACC
GCCGTGCATTTCGCGTTCGGCAGCAGTGTGTGGGCACTGTTGCCGCTCGTGGCGCGCAAGCTGCTCCATGGCAGCGCGGG
GCTCTACGGCGTGATGCTCGGGGCGGTCGGGGTGGGCGCAATTCTTGGCGCGTTGCTCATGCCGCGTCTGCAGAAGCGGC
TCGACGCCGACGGGATGGTGCTGCTGTCCGCCATCGTCACGGCCGTCGTGATGGCCGCGCTCTCCGTCGCGCCACCCGTC
TGGCTGGCGCTGGTGCTGCTGTTGCTGTTGGGCGCGGCATGGATCATGGCGCTGACCACGTTCGGCGGCGTGGCGCAAGC
CATCCTGCCCAACTGGGTGCGTGGCCGCGCGCTGGCGGTCTACCAGATGGTCTTCAACGGCGCGCTGGCCGGTGGCAGCC
TGCTCTGGGGCTTCGTGGCGCAGGCGCTCGGCACGCCCCCCGCGCTGCTGATCGCCGGCTCGGGCCTGGTAGTCGCCGCG
CTGGCGCTGCACCGGCTGCGTCTGCCGCACGGCGAAGACGACCTTGGCCCGGCCGGCCACTGGCCCGAGCCCGAAATGGC
CGACGAGATCGCGCACGATCGCGGCCCGGTGATGATCCTGATCGAGTACCTGATTGCCCCGGCCAACCGGGACGGCTTCC
TGCACGCCGTGCACCGGCTCTCCGAAGAGCGGCTGCGCGATGGCGCATTCAGTTGGGGCGTGATGGAAGACCCCACCAAT
CCCGAATTGATGACCGAGTGGTTTCTGGTCGAGTCATGGGCCGAGCACCTGCGGCAACACCGCCGCGTGCCGAACGCCGA
TGCCGACCTGCAGCGAGAAGTGACCGCGTTCCATGGTGGCACGACGCCACCGCGTGTGCGGCATCTGCTGGGCGTGGGAC
TGCCACCGAACAAGCGATGA

Upstream 100 bases:

>100_bases
CGGCATGGCAAATGCATTCTTCGAGCACCTGGGTCTGGTCGGCGGCTTCGTGCTGGTGGCCTGGCATGACCTGCGAGCGT
AGAGACGACAGATAGTCCAC

Downstream 100 bases:

>100_bases
CGCACCTGCCGTCCCCCCCTGTTTCCTATGACCCGTTTCGTATTGCGACATATCGTGAGGCTCGCATGAAGCTCTATCTG
ATCTCATTGGGCGCCGGCAT

Product: putative major facilitator superfamily transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; MFS Permease; MFS Family Transporter; Integral Membrane Efflux Protein; MFS Transporter; Multidrug ABC Transporter; Facilitator Superfamily Permease; Permease; Transporter Facilitator Family; Facilitator Superfamily; Arabinose Efflux Permease Family Protein; Transport Transmembrane Protein; Mfs Transporter; Facilitator Superfamily Transmembrane Transporter; Facilitator Superfamily Transporter; Permease Of Facilitator Superfamily Protein; Transmembrane Efflux Protein; ABC Transporter Permease Protein; Facilitator Transpoter; Macrolide-Efflux Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; Dioxygenase; MFS Family Diterpenoid Transporter; Drug Resistance Efflux Protein; MFS Superfamily Transporter

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MTQSASTANAPASTGTFAPLAQSTFAVLWVATILGNIGSFMRDVASAWLATDLSTSPAAVATIQAASTLPVFLLAIPAGV
LSDILDRRRFLIVIQLCLALVSGSLMLLAWRQSLTIELLIALAFAGGIGSAMMGPTWQSIVPELVPANTLRQAVALNSLG
VNIARAIGPATGGLLLAAFGAAATYGVDLLSYVFVVAALIWWHRPQRPVDPLREHFFSAARAGLRFTRAHSKLHVVLART
AVHFAFGSSVWALLPLVARKLLHGSAGLYGVMLGAVGVGAILGALLMPRLQKRLDADGMVLLSAIVTAVVMAALSVAPPV
WLALVLLLLLGAAWIMALTTFGGVAQAILPNWVRGRALAVYQMVFNGALAGGSLLWGFVAQALGTPPALLIAGSGLVVAA
LALHRLRLPHGEDDLGPAGHWPEPEMADEIAHDRGPVMILIEYLIAPANRDGFLHAVHRLSEERLRDGAFSWGVMEDPTN
PELMTEWFLVESWAEHLRQHRRVPNADADLQREVTAFHGGTTPPRVRHLLGVGLPPNKR

Sequences:

>Translated_539_residues
MTQSASTANAPASTGTFAPLAQSTFAVLWVATILGNIGSFMRDVASAWLATDLSTSPAAVATIQAASTLPVFLLAIPAGV
LSDILDRRRFLIVIQLCLALVSGSLMLLAWRQSLTIELLIALAFAGGIGSAMMGPTWQSIVPELVPANTLRQAVALNSLG
VNIARAIGPATGGLLLAAFGAAATYGVDLLSYVFVVAALIWWHRPQRPVDPLREHFFSAARAGLRFTRAHSKLHVVLART
AVHFAFGSSVWALLPLVARKLLHGSAGLYGVMLGAVGVGAILGALLMPRLQKRLDADGMVLLSAIVTAVVMAALSVAPPV
WLALVLLLLLGAAWIMALTTFGGVAQAILPNWVRGRALAVYQMVFNGALAGGSLLWGFVAQALGTPPALLIAGSGLVVAA
LALHRLRLPHGEDDLGPAGHWPEPEMADEIAHDRGPVMILIEYLIAPANRDGFLHAVHRLSEERLRDGAFSWGVMEDPTN
PELMTEWFLVESWAEHLRQHRRVPNADADLQREVTAFHGGTTPPRVRHLLGVGLPPNKR
>Mature_538_residues
TQSASTANAPASTGTFAPLAQSTFAVLWVATILGNIGSFMRDVASAWLATDLSTSPAAVATIQAASTLPVFLLAIPAGVL
SDILDRRRFLIVIQLCLALVSGSLMLLAWRQSLTIELLIALAFAGGIGSAMMGPTWQSIVPELVPANTLRQAVALNSLGV
NIARAIGPATGGLLLAAFGAAATYGVDLLSYVFVVAALIWWHRPQRPVDPLREHFFSAARAGLRFTRAHSKLHVVLARTA
VHFAFGSSVWALLPLVARKLLHGSAGLYGVMLGAVGVGAILGALLMPRLQKRLDADGMVLLSAIVTAVVMAALSVAPPVW
LALVLLLLLGAAWIMALTTFGGVAQAILPNWVRGRALAVYQMVFNGALAGGSLLWGFVAQALGTPPALLIAGSGLVVAAL
ALHRLRLPHGEDDLGPAGHWPEPEMADEIAHDRGPVMILIEYLIAPANRDGFLHAVHRLSEERLRDGAFSWGVMEDPTNP
ELMTEWFLVESWAEHLRQHRRVPNADADLQREVTAFHGGTTPPRVRHLLGVGLPPNKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57256; Mature: 57125

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSASTANAPASTGTFAPLAQSTFAVLWVATILGNIGSFMRDVASAWLATDLSTSPAAV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ATIQAASTLPVFLLAIPAGVLSDILDRRRFLIVIQLCLALVSGSLMLLAWRQSLTIELLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHH
ALAFAGGIGSAMMGPTWQSIVPELVPANTLRQAVALNSLGVNIARAIGPATGGLLLAAFG
HHHHHCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHH
AAATYGVDLLSYVFVVAALIWWHRPQRPVDPLREHFFSAARAGLRFTRAHSKLHVVLART
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVHFAFGSSVWALLPLVARKLLHGSAGLYGVMLGAVGVGAILGALLMPRLQKRLDADGMV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLSAIVTAVVMAALSVAPPVWLALVLLLLLGAAWIMALTTFGGVAQAILPNWVRGRALAV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQMVFNGALAGGSLLWGFVAQALGTPPALLIAGSGLVVAALALHRLRLPHGEDDLGPAGH
HHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC
WPEPEMADEIAHDRGPVMILIEYLIAPANRDGFLHAVHRLSEERLRDGAFSWGVMEDPTN
CCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PELMTEWFLVESWAEHLRQHRRVPNADADLQREVTAFHGGTTPPRVRHLLGVGLPPNKR
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TQSASTANAPASTGTFAPLAQSTFAVLWVATILGNIGSFMRDVASAWLATDLSTSPAAV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ATIQAASTLPVFLLAIPAGVLSDILDRRRFLIVIQLCLALVSGSLMLLAWRQSLTIELLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHH
ALAFAGGIGSAMMGPTWQSIVPELVPANTLRQAVALNSLGVNIARAIGPATGGLLLAAFG
HHHHHCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHH
AAATYGVDLLSYVFVVAALIWWHRPQRPVDPLREHFFSAARAGLRFTRAHSKLHVVLART
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVHFAFGSSVWALLPLVARKLLHGSAGLYGVMLGAVGVGAILGALLMPRLQKRLDADGMV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLSAIVTAVVMAALSVAPPVWLALVLLLLLGAAWIMALTTFGGVAQAILPNWVRGRALAV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQMVFNGALAGGSLLWGFVAQALGTPPALLIAGSGLVVAALALHRLRLPHGEDDLGPAGH
HHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC
WPEPEMADEIAHDRGPVMILIEYLIAPANRDGFLHAVHRLSEERLRDGAFSWGVMEDPTN
CCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PELMTEWFLVESWAEHLRQHRRVPNADADLQREVTAFHGGTTPPRVRHLLGVGLPPNKR
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA