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The map label for this gene is fliF [H]

Identifier: 94314180

GI number: 94314180

Start: 1958818

End: 1960509

Strand: Direct

Name: fliF [H]

Synonym: Rmet_5261

Alternate gene names: 94314180

Gene position: 1958818-1960509 (Clockwise)

Preceding gene: 94314179

Following gene: 94314181

Centisome position: 75.92

GC content: 66.13

Gene sequence:

>1692_bases
ATGAACGCGACCGCAACCCTGCCGAACGGCACGGCCCTGCTCGAAAAGGTCAAGGCCAACCCGCGCCTGCCCATGATGCT
GGGCGGCGCCGCGCTGGTCGCCGCTATCGCCGTGGGTGTGATGTGGTCCCGCGCGCCGGACTACAAGGTGCTCTATTCCA
ATCTGTCGGAGCGTGACGGCGGTGCCGTGATCCAGTCGCTCCAGCAGATGAACGTGCCCTACAAGTTCGCCGAAGGTGGT
GGTGCGGTCATGGTGCCGGCCGACAAGGTGGCCGAGACGCGCCTGCGCCTGGCCAGCCAGGGCCTGCCGAAAAGCGGCAC
GACCGGCATGGAACTGATGGACAACCAGAAGTTCGGCATCAGCCAGTTCGCCGAACAGGTCAACTATCAACGCGGGCTGG
AAGGCGAACTGGCCCGTTCGATCGAATCGATCGGCGCGGTGCAGTCGGCCCGCGTGCACCTGGCGATTCCCAAGCCCACG
CTGTTCGTACGTGAGCGCCAGAAGCCCACCGCCTCCGTGGTGCTGCAACTCTACCCGGGGCGCGCCGTCGATGAAGGCCA
GGTGGCCGCGATCACGCACCTGGTGTCTTCCAGCGTGCCAGAACTGACGCCGAAGTCGATCTCGATCGTCGACCAGCAGG
GCAACCTGCTGTCCGGCACCAACGATCGTTCGCTCGATGCCAGCCAGCTCAAGTACGTCCAACAGGTCGAGCAGGGCTAC
GTCAAGCGCGTGGAGTCGATCCTCGCGCCGATCCTCGGCAAGGACAACATCCACGCCCAGGTCACGGCCGATGTCGATTT
CTCGTCGGTCGAACATACCGACGAAAGCTACAAGCCGAACCAGGACCCGACCAAGGCCGCGATCCGCAGCCAGCAGACCA
GCGAATCGAACTCGCAGGGTGGCACGCCTGTAGGTGGCGTGCCCGGCGCGCTGTCGAACCAGCCGCCAGCCGCCGCCGCC
GCGCCGGTCACCACGCCGCAACCGCCGCGCCAGCCCGGCCAGCCGAATCCGCCCGCACAGGCCAACCAGCCCGCGCAGAC
GACCCAGACGACCCAGACGGCCGAGAAGACCGGCCCGAGCAACAGCCGCCGCGACTCCACCACCAACTACGAACTCGACC
GCGTGGTGCGCCACGTGCAGCAGGCAGCAGGCGGTGTGAAACGTCTGTCGGTGGCCGTGGTGGTGAACTACCGCACCAAG
GTCGATGCCAAGGGCAAGCCGGTGACGGAAGCGCTGTCGGCCAAGGAACTGGCCCAGATCGAAAACCTGACCAAGGAAGC
GATGGGCTTCTCCGCCGACCGCGGCGACTCGCTGAACGTGGTCAACAGCCCGTTCACGAGCGACATCAAGACGGAGCCGG
AAGTGCCGGTGTGGAAGCAGCCGCAGATGATCGACCTGGCCAAGACCGGCGTCGGCTACCTGCTGCTGGCCCTGCTGGCC
GTGTTCCTGTGGTTCAAGGTCGCGCGTCCGGTGCTGCGCAAGTACACCGCGCCGCCGTTGCCCGCGCCTACCGAGACGGC
AGCCGCCACCGAAGCCGTTCTGCTGCCGCCGGAAGAAGAAACCAATCCGGAAGTGCTGCGCCTGGCCGCGAAATATGAAA
GCGATCTCGCCCTGGTGCGCGACGCCGCGCAACGCGACCCGCGCCTGGTCGCCAGCGTAATCAAGACTTGGATGGCAAAT
GACGAAGGCTAA

Upstream 100 bases:

>100_bases
TTTTTCTGCAGCGTGATTTGAGCCGTGCCGGGAAGATTAACGGCAGCAAAGGCCAGAGTGGCAAGGGCGAATTTTGCCTC
GCCAAGCCGGAGACGCGCGC

Downstream 100 bases:

>100_bases
CAAGGGAGTGCCCGAAAAGGGCCTGCAGAAGAGCGCCATCCTGATGATGGCCGTGGGCGAGGATGCAGCCGCCGAAGTCT
TCAAGCACCTGTCGCCGCGC

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MNATATLPNGTALLEKVKANPRLPMMLGGAALVAAIAVGVMWSRAPDYKVLYSNLSERDGGAVIQSLQQMNVPYKFAEGG
GAVMVPADKVAETRLRLASQGLPKSGTTGMELMDNQKFGISQFAEQVNYQRGLEGELARSIESIGAVQSARVHLAIPKPT
LFVRERQKPTASVVLQLYPGRAVDEGQVAAITHLVSSSVPELTPKSISIVDQQGNLLSGTNDRSLDASQLKYVQQVEQGY
VKRVESILAPILGKDNIHAQVTADVDFSSVEHTDESYKPNQDPTKAAIRSQQTSESNSQGGTPVGGVPGALSNQPPAAAA
APVTTPQPPRQPGQPNPPAQANQPAQTTQTTQTAEKTGPSNSRRDSTTNYELDRVVRHVQQAAGGVKRLSVAVVVNYRTK
VDAKGKPVTEALSAKELAQIENLTKEAMGFSADRGDSLNVVNSPFTSDIKTEPEVPVWKQPQMIDLAKTGVGYLLLALLA
VFLWFKVARPVLRKYTAPPLPAPTETAAATEAVLLPPEEETNPEVLRLAAKYESDLALVRDAAQRDPRLVASVIKTWMAN
DEG

Sequences:

>Translated_563_residues
MNATATLPNGTALLEKVKANPRLPMMLGGAALVAAIAVGVMWSRAPDYKVLYSNLSERDGGAVIQSLQQMNVPYKFAEGG
GAVMVPADKVAETRLRLASQGLPKSGTTGMELMDNQKFGISQFAEQVNYQRGLEGELARSIESIGAVQSARVHLAIPKPT
LFVRERQKPTASVVLQLYPGRAVDEGQVAAITHLVSSSVPELTPKSISIVDQQGNLLSGTNDRSLDASQLKYVQQVEQGY
VKRVESILAPILGKDNIHAQVTADVDFSSVEHTDESYKPNQDPTKAAIRSQQTSESNSQGGTPVGGVPGALSNQPPAAAA
APVTTPQPPRQPGQPNPPAQANQPAQTTQTTQTAEKTGPSNSRRDSTTNYELDRVVRHVQQAAGGVKRLSVAVVVNYRTK
VDAKGKPVTEALSAKELAQIENLTKEAMGFSADRGDSLNVVNSPFTSDIKTEPEVPVWKQPQMIDLAKTGVGYLLLALLA
VFLWFKVARPVLRKYTAPPLPAPTETAAATEAVLLPPEEETNPEVLRLAAKYESDLALVRDAAQRDPRLVASVIKTWMAN
DEG
>Mature_563_residues
MNATATLPNGTALLEKVKANPRLPMMLGGAALVAAIAVGVMWSRAPDYKVLYSNLSERDGGAVIQSLQQMNVPYKFAEGG
GAVMVPADKVAETRLRLASQGLPKSGTTGMELMDNQKFGISQFAEQVNYQRGLEGELARSIESIGAVQSARVHLAIPKPT
LFVRERQKPTASVVLQLYPGRAVDEGQVAAITHLVSSSVPELTPKSISIVDQQGNLLSGTNDRSLDASQLKYVQQVEQGY
VKRVESILAPILGKDNIHAQVTADVDFSSVEHTDESYKPNQDPTKAAIRSQQTSESNSQGGTPVGGVPGALSNQPPAAAA
APVTTPQPPRQPGQPNPPAQANQPAQTTQTTQTAEKTGPSNSRRDSTTNYELDRVVRHVQQAAGGVKRLSVAVVVNYRTK
VDAKGKPVTEALSAKELAQIENLTKEAMGFSADRGDSLNVVNSPFTSDIKTEPEVPVWKQPQMIDLAKTGVGYLLLALLA
VFLWFKVARPVLRKYTAPPLPAPTETAAATEAVLLPPEEETNPEVLRLAAKYESDLALVRDAAQRDPRLVASVIKTWMAN
DEG

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=572, Percent_Identity=50, Blast_Score=522, Evalue=1e-149,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 60264; Mature: 60264

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATATLPNGTALLEKVKANPRLPMMLGGAALVAAIAVGVMWSRAPDYKVLYSNLSERDG
CCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC
GAVIQSLQQMNVPYKFAEGGGAVMVPADKVAETRLRLASQGLPKSGTTGMELMDNQKFGI
HHHHHHHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCH
SQFAEQVNYQRGLEGELARSIESIGAVQSARVHLAIPKPTLFVRERQKPTASVVLQLYPG
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHCEEEEECCCCEEEEECCCCCCCCEEEEECCC
RAVDEGQVAAITHLVSSSVPELTPKSISIVDQQGNLLSGTNDRSLDASQLKYVQQVEQGY
CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHH
VKRVESILAPILGKDNIHAQVTADVDFSSVEHTDESYKPNQDPTKAAIRSQQTSESNSQG
HHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
GTPVGGVPGALSNQPPAAAAAPVTTPQPPRQPGQPNPPAQANQPAQTTQTTQTAEKTGPS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
NSRRDSTTNYELDRVVRHVQQAAGGVKRLSVAVVVNYRTKVDAKGKPVTEALSAKELAQI
CCCCCCCCCHHHHHHHHHHHHHHCCHHEEEEEEEEEECEECCCCCCCHHHHHHHHHHHHH
ENLTKEAMGFSADRGDSLNVVNSPFTSDIKTEPEVPVWKQPQMIDLAKTGVGYLLLALLA
HHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VFLWFKVARPVLRKYTAPPLPAPTETAAATEAVLLPPEEETNPEVLRLAAKYESDLALVR
HHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
DAAQRDPRLVASVIKTWMANDEG
HHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNATATLPNGTALLEKVKANPRLPMMLGGAALVAAIAVGVMWSRAPDYKVLYSNLSERDG
CCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC
GAVIQSLQQMNVPYKFAEGGGAVMVPADKVAETRLRLASQGLPKSGTTGMELMDNQKFGI
HHHHHHHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCH
SQFAEQVNYQRGLEGELARSIESIGAVQSARVHLAIPKPTLFVRERQKPTASVVLQLYPG
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHCEEEEECCCCEEEEECCCCCCCCEEEEECCC
RAVDEGQVAAITHLVSSSVPELTPKSISIVDQQGNLLSGTNDRSLDASQLKYVQQVEQGY
CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHH
VKRVESILAPILGKDNIHAQVTADVDFSSVEHTDESYKPNQDPTKAAIRSQQTSESNSQG
HHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
GTPVGGVPGALSNQPPAAAAAPVTTPQPPRQPGQPNPPAQANQPAQTTQTTQTAEKTGPS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
NSRRDSTTNYELDRVVRHVQQAAGGVKRLSVAVVVNYRTKVDAKGKPVTEALSAKELAQI
CCCCCCCCCHHHHHHHHHHHHHHCCHHEEEEEEEEEECEECCCCCCCHHHHHHHHHHHHH
ENLTKEAMGFSADRGDSLNVVNSPFTSDIKTEPEVPVWKQPQMIDLAKTGVGYLLLALLA
HHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VFLWFKVARPVLRKYTAPPLPAPTETAAATEAVLLPPEEETNPEVLRLAAKYESDLALVR
HHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
DAAQRDPRLVASVIKTWMANDEG
HHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]