Click here to switch to the map view.

The map label for this gene is fliD2 [H]

Identifier: 94314173

GI number: 94314173

Start: 1954045

End: 1955517

Strand: Direct

Name: fliD2 [H]

Synonym: Rmet_5254

Alternate gene names: 94314173

Gene position: 1954045-1955517 (Clockwise)

Preceding gene: 94314172

Following gene: 94314174

Centisome position: 75.74

GC content: 62.59

Gene sequence:

>1473_bases
ATGACTACGATCTCCAACCTCGGCGTCGGCTCCGGTCTCGACCTGAGCAGCCTGCTCGATCAGCTCACCACGGCTGAACA
GGCCCCGCTCACCGCGATCAAGACCCAGCAGAGCAGCTACCAGACCAAACTGTCCGCGTACGGCCAGTTGCAGAGCATGC
TCGCGGCGTTCCAGGCTTCGGCCAACCAGTTGTCGAACCCCACGTTCTTCCAATCCACCACGGCAAGCGCAAGCAACACC
TCGGTACTGAGCGCCACCGGCAGCACCACTGCGGTGCCAGGCACCTACTCGGTCAACGTCACGCAACTGGCGCAGTCGCA
GTCGGTGGTTTCCACCGGACAGGCATCGCAGACCACCGCCGTCGGCACCGGCACGATCCATATCGATTTCGGTGCGATCA
CGGGTGGCACGCTGGACAGCAACCCGGCCAGCGCCACCTACGGCAAGTACACCGGCGCCACCTTCACTGCCAATAGCGGC
TCCACCGGCGTCGACATCACGATCGACAGCAGCAACAACACGCTGCAGGGCGTTCGCGACGCGATCAACAAGGCCAATGC
CGGCGTCACAGCCAGCATCGTCAACGACGGTTCGGGCACGCCCTATCGCCTGGTCATCAGTTCCAACGCCACCGGTGCCA
CGAACAGCGTGCGCATGTCGGTGAATGAAACCGATGGCGGCACCGGCCTCTCGGATCTGGCGGCATACGATCCAGCCGGC
ACGCAGAACATGCAGCAGACCATTGCGGCCCAGAACGCCCAGCTCACGGTCAACAACATCGCCGTCCAGAGCAAGGGAAA
TTCCGTGGCGGACGCGGTGCCAGGCGTGGTCCTTAACCTGACCCAGACCGGTACGAGCAGTGTGACGGTCCAGCGCGACA
ACAGTTCGATCGTCTCCGGCGTGCAGGCCTTCGTCGCGGCTTACAACAACCTCCAGAACACCGCTGCGTCGCTGTCGGCC
TACGACCCGAGCACCAAGACCGGTTCTCCCCTGACGGGCGATTCCACGTTGAGCATCATCCAGTCCCAGATGCGCAGCGT
GATGAACACGCCGCAGTCGGGCAACGCGCTCACCACGCTGTCGCAGATCGGCATCTCGTTCCAGAACGACGGCACGCTTG
CTCTCGACACCACCAAGCTGACCTCGGCGCTGAACAGCAACCCCGGCGCGGTTGCGGGGCTGTTCGGCAACACCGACGGC
GTGAGTGGCTACGGCAACCAGATCAACAAGCTCGTCACGGGCCTGACCAGCAGCAACGGCGCGTTGACGACGGCCACGGC
CGGCATCAACAACACGCTCAAGGATCTGAGCAATCAGTACGATGAAACGCAGACCCGCGTCGACGCGGTCATCGCCAACT
ACAAGACGCAGTTCACGCAACTCGACGTGATCATGTCGCAGATGCAGAACACCAGTTCGTACCTGACGCAGCAGTTCAGC
GCCATGAACGGCACAAGCAGTAGCAAGAAGTAA

Upstream 100 bases:

>100_bases
GCGTATCGCCGACGCGCTGGCCCAGTTGCAAGGGCTGTTCGTCAACCAGACCGCCTGACATCGTCGCAGCCCCAACCAGA
AGCCCCCTGGAAAACAAGAA

Downstream 100 bases:

>100_bases
CGTCAGCCAACAGCAGGAGTCCACATGTTCGCGCGCCGCAATGCCGTCAATGCCTACGCCCAGGTGGGTGTCGAAACCGG
AGCCATGAGTGCCAGTCCGC

Product: flagellar filament capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MTTISNLGVGSGLDLSSLLDQLTTAEQAPLTAIKTQQSSYQTKLSAYGQLQSMLAAFQASANQLSNPTFFQSTTASASNT
SVLSATGSTTAVPGTYSVNVTQLAQSQSVVSTGQASQTTAVGTGTIHIDFGAITGGTLDSNPASATYGKYTGATFTANSG
STGVDITIDSSNNTLQGVRDAINKANAGVTASIVNDGSGTPYRLVISSNATGATNSVRMSVNETDGGTGLSDLAAYDPAG
TQNMQQTIAAQNAQLTVNNIAVQSKGNSVADAVPGVVLNLTQTGTSSVTVQRDNSSIVSGVQAFVAAYNNLQNTAASLSA
YDPSTKTGSPLTGDSTLSIIQSQMRSVMNTPQSGNALTTLSQIGISFQNDGTLALDTTKLTSALNSNPGAVAGLFGNTDG
VSGYGNQINKLVTGLTSSNGALTTATAGINNTLKDLSNQYDETQTRVDAVIANYKTQFTQLDVIMSQMQNTSSYLTQQFS
AMNGTSSSKK

Sequences:

>Translated_490_residues
MTTISNLGVGSGLDLSSLLDQLTTAEQAPLTAIKTQQSSYQTKLSAYGQLQSMLAAFQASANQLSNPTFFQSTTASASNT
SVLSATGSTTAVPGTYSVNVTQLAQSQSVVSTGQASQTTAVGTGTIHIDFGAITGGTLDSNPASATYGKYTGATFTANSG
STGVDITIDSSNNTLQGVRDAINKANAGVTASIVNDGSGTPYRLVISSNATGATNSVRMSVNETDGGTGLSDLAAYDPAG
TQNMQQTIAAQNAQLTVNNIAVQSKGNSVADAVPGVVLNLTQTGTSSVTVQRDNSSIVSGVQAFVAAYNNLQNTAASLSA
YDPSTKTGSPLTGDSTLSIIQSQMRSVMNTPQSGNALTTLSQIGISFQNDGTLALDTTKLTSALNSNPGAVAGLFGNTDG
VSGYGNQINKLVTGLTSSNGALTTATAGINNTLKDLSNQYDETQTRVDAVIANYKTQFTQLDVIMSQMQNTSSYLTQQFS
AMNGTSSSKK
>Mature_489_residues
TTISNLGVGSGLDLSSLLDQLTTAEQAPLTAIKTQQSSYQTKLSAYGQLQSMLAAFQASANQLSNPTFFQSTTASASNTS
VLSATGSTTAVPGTYSVNVTQLAQSQSVVSTGQASQTTAVGTGTIHIDFGAITGGTLDSNPASATYGKYTGATFTANSGS
TGVDITIDSSNNTLQGVRDAINKANAGVTASIVNDGSGTPYRLVISSNATGATNSVRMSVNETDGGTGLSDLAAYDPAGT
QNMQQTIAAQNAQLTVNNIAVQSKGNSVADAVPGVVLNLTQTGTSSVTVQRDNSSIVSGVQAFVAAYNNLQNTAASLSAY
DPSTKTGSPLTGDSTLSIIQSQMRSVMNTPQSGNALTTLSQIGISFQNDGTLALDTTKLTSALNSNPGAVAGLFGNTDGV
SGYGNQINKLVTGLTSSNGALTTATAGINNTLKDLSNQYDETQTRVDAVIANYKTQFTQLDVIMSQMQNTSSYLTQQFSA
MNGTSSSKK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=491, Percent_Identity=39.5112016293279, Blast_Score=281, Evalue=9e-77,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 49985; Mature: 49854

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTISNLGVGSGLDLSSLLDQLTTAEQAPLTAIKTQQSSYQTKLSAYGQLQSMLAAFQAS
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHH
ANQLSNPTFFQSTTASASNTSVLSATGSTTAVPGTYSVNVTQLAQSQSVVSTGQASQTTA
HHHCCCCCEEECCCCCCCCCEEEEECCCCEECCCEEEEEHHHHHHHHHHHHCCCCCCEEE
VGTGTIHIDFGAITGGTLDSNPASATYGKYTGATFTANSGSTGVDITIDSSNNTLQGVRD
EECEEEEEEECCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHH
AINKANAGVTASIVNDGSGTPYRLVISSNATGATNSVRMSVNETDGGTGLSDLAAYDPAG
HHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCC
TQNMQQTIAAQNAQLTVNNIAVQSKGNSVADAVPGVVLNLTQTGTSSVTVQRDNSSIVSG
CHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHCCCEEEEEECCCCCEEEEECCCHHHHHH
VQAFVAAYNNLQNTAASLSAYDPSTKTGSPLTGDSTLSIIQSQMRSVMNTPQSGNALTTL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
SQIGISFQNDGTLALDTTKLTSALNSNPGAVAGLFGNTDGVSGYGNQINKLVTGLTSSNG
HHHCCEECCCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCC
ALTTATAGINNTLKDLSNQYDETQTRVDAVIANYKTQFTQLDVIMSQMQNTSSYLTQQFS
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMNGTSSSKK
HCCCCCCCCC
>Mature Secondary Structure 
TTISNLGVGSGLDLSSLLDQLTTAEQAPLTAIKTQQSSYQTKLSAYGQLQSMLAAFQAS
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHH
ANQLSNPTFFQSTTASASNTSVLSATGSTTAVPGTYSVNVTQLAQSQSVVSTGQASQTTA
HHHCCCCCEEECCCCCCCCCEEEEECCCCEECCCEEEEEHHHHHHHHHHHHCCCCCCEEE
VGTGTIHIDFGAITGGTLDSNPASATYGKYTGATFTANSGSTGVDITIDSSNNTLQGVRD
EECEEEEEEECCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHH
AINKANAGVTASIVNDGSGTPYRLVISSNATGATNSVRMSVNETDGGTGLSDLAAYDPAG
HHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCC
TQNMQQTIAAQNAQLTVNNIAVQSKGNSVADAVPGVVLNLTQTGTSSVTVQRDNSSIVSG
CHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHCCCEEEEEECCCCCEEEEECCCHHHHHH
VQAFVAAYNNLQNTAASLSAYDPSTKTGSPLTGDSTLSIIQSQMRSVMNTPQSGNALTTL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
SQIGISFQNDGTLALDTTKLTSALNSNPGAVAGLFGNTDGVSGYGNQINKLVTGLTSSNG
HHHCCEECCCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCC
ALTTATAGINNTLKDLSNQYDETQTRVDAVIANYKTQFTQLDVIMSQMQNTSSYLTQQFS
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMNGTSSSKK
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1527488; 9097040; 9278503; 2659972; 6305924 [H]