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The map label for this gene is 94314160

Identifier: 94314160

GI number: 94314160

Start: 1939477

End: 1940766

Strand: Direct

Name: 94314160

Synonym: Rmet_5241

Alternate gene names: NA

Gene position: 1939477-1940766 (Clockwise)

Preceding gene: 94314159

Following gene: 94314161

Centisome position: 75.17

GC content: 61.55

Gene sequence:

>1290_bases
ATGAATGCGTCCATGAACAAGAAACTGAAGGTCCTGGTTTTCCCTTGCGGCTCGGAGAACGCAGCCGAGATCCACCAGGC
GCTCAGGTATTCGTTGCATGTCGAGCTGTTCGGCGCATCCAGCGTGGACGACCACGGCCGCTTTCGCTTCGAACGGTACG
TTGGCGGGTTGCCGAAGATCAGCGACGCCGAATTCGACAGCACCTTCTCGCGGCTTCTTGTCGAACTCGACATTGATGTC
GTCTTCGCAACGCACGACTCCGTGCTCGACTATCTCGCGCCGCGCGCCCCTGGAATGGGCGTCACGCTGATCAATGGCGA
CCCGCAGACCGCGGCCATCGCGCGGCGCAAGAGCGCCACCTACGCGTGCTTTCGCGATGCCGACTGGGCGCCGCACATGT
TCGAGTCGGTCGAGGCGGTGAAAGCGTGGCCGATCATCGTCAAGCCTGATCTTGGACAGGGCGGCCAGGGCGTGACGCTG
GCAAACGATCCGCAACAGGCTCGCGCGGCGATGGACGCGATGCAGTTCCCGGTCCTGGTCGAGTACCTTCCGGGCGAAGA
AATCACCGTGGATTGCTTCACGGACCGCAAACGGCGGCTCGTCTGGACCGGACCGCGTACCCGCGAACGAGTGCGGGCAG
GCATCACCATGCGCTCCCGCTTGCTGGCGCTGTCCCCTGAGATCGAAGGCATCGCCCGCGAGATCAATCAACGCCTGCAG
CTCCGCGGACCGTGGTTCTTCCAGCTCAAGGCGGACAAGGATGGCCGCTGGAAGCTTCTCGAGATTTCATGCCGCGTTGC
CGGCACGATGGTCGCGCAGCGCGCGCGCGGCGTGAACCTGCCGCTGATGGCGGTGCAGGATCACCTCGGCCGCGATCTGG
TCGCGCTGGACAATCCGCACGTCAACCTGGTGGAGCGGAGTATCGCCACGCGTACACGTCTGGATTTCGCCTACGACTCT
GTCTTCGTCGATCTCGACGACACCCTGGTGCTGAACGGACATGCCGTGCCGCAAACCATGGCGTTCCTGTATCAGTCCAA
GGCGGACGGCAAGAAAGTGAACCTGATCACCCGGCACGCGTTCGATGTCGCTCAGACACTCGAGAAGGCCCATATCAGCC
GCGGCATCTTCGATCAGATCATCGTGATCACCGACGGCGGCTCAAAGGCCGACCATTTCTCACCTGACTCAATCTTTATC
GACAATCATTTTCCCGAGAGACTCGAGGTCGCGAGAAAGCTCGCAATCCCCGTTCTCGATGTGGACATGGTCGAGTTCCT
TATCAAGTAG

Upstream 100 bases:

>100_bases
ATCTCGATGGATGCTTCGAGTTGGGACGGGTCTACCCGGATCTGTGCTCGAGCATCTACGTGATCTGCGAGCGCGGCGAC
ACCGCCTGAAGTCAGACTGA

Downstream 100 bases:

>100_bases
ACGGAACCCATGGAAAAGACATCTCCCGATTTTCTGGCTGTGCTGCGCACGGAGCGAAGAGATCTGTTGAACCGGATGCG
GCAGACCCGATTCGAATCGC

Product: putative carbamoylphosphate synthase large subunit short form

Products: NA

Alternate protein names: Biotin Carboxylase

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MNASMNKKLKVLVFPCGSENAAEIHQALRYSLHVELFGASSVDDHGRFRFERYVGGLPKISDAEFDSTFSRLLVELDIDV
VFATHDSVLDYLAPRAPGMGVTLINGDPQTAAIARRKSATYACFRDADWAPHMFESVEAVKAWPIIVKPDLGQGGQGVTL
ANDPQQARAAMDAMQFPVLVEYLPGEEITVDCFTDRKRRLVWTGPRTRERVRAGITMRSRLLALSPEIEGIAREINQRLQ
LRGPWFFQLKADKDGRWKLLEISCRVAGTMVAQRARGVNLPLMAVQDHLGRDLVALDNPHVNLVERSIATRTRLDFAYDS
VFVDLDDTLVLNGHAVPQTMAFLYQSKADGKKVNLITRHAFDVAQTLEKAHISRGIFDQIIVITDGGSKADHFSPDSIFI
DNHFPERLEVARKLAIPVLDVDMVEFLIK

Sequences:

>Translated_429_residues
MNASMNKKLKVLVFPCGSENAAEIHQALRYSLHVELFGASSVDDHGRFRFERYVGGLPKISDAEFDSTFSRLLVELDIDV
VFATHDSVLDYLAPRAPGMGVTLINGDPQTAAIARRKSATYACFRDADWAPHMFESVEAVKAWPIIVKPDLGQGGQGVTL
ANDPQQARAAMDAMQFPVLVEYLPGEEITVDCFTDRKRRLVWTGPRTRERVRAGITMRSRLLALSPEIEGIAREINQRLQ
LRGPWFFQLKADKDGRWKLLEISCRVAGTMVAQRARGVNLPLMAVQDHLGRDLVALDNPHVNLVERSIATRTRLDFAYDS
VFVDLDDTLVLNGHAVPQTMAFLYQSKADGKKVNLITRHAFDVAQTLEKAHISRGIFDQIIVITDGGSKADHFSPDSIFI
DNHFPERLEVARKLAIPVLDVDMVEFLIK
>Mature_429_residues
MNASMNKKLKVLVFPCGSENAAEIHQALRYSLHVELFGASSVDDHGRFRFERYVGGLPKISDAEFDSTFSRLLVELDIDV
VFATHDSVLDYLAPRAPGMGVTLINGDPQTAAIARRKSATYACFRDADWAPHMFESVEAVKAWPIIVKPDLGQGGQGVTL
ANDPQQARAAMDAMQFPVLVEYLPGEEITVDCFTDRKRRLVWTGPRTRERVRAGITMRSRLLALSPEIEGIAREINQRLQ
LRGPWFFQLKADKDGRWKLLEISCRVAGTMVAQRARGVNLPLMAVQDHLGRDLVALDNPHVNLVERSIATRTRLDFAYDS
VFVDLDDTLVLNGHAVPQTMAFLYQSKADGKKVNLITRHAFDVAQTLEKAHISRGIFDQIIVITDGGSKADHFSPDSIFI
DNHFPERLEVARKLAIPVLDVDMVEFLIK

Specific function: Unknown

COG id: COG0458

COG function: function code EF; Carbamoylphosphate synthase large subunit (split gene in MJ)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47976; Mature: 47976

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASMNKKLKVLVFPCGSENAAEIHQALRYSLHVELFGASSVDDHGRFRFERYVGGLPKI
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCEEHHHHHCCCCCC
SDAEFDSTFSRLLVELDIDVVFATHDSVLDYLAPRAPGMGVTLINGDPQTAAIARRKSAT
CCCCHHHHHHHHEEEEEEEEEEEEHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCCE
YACFRDADWAPHMFESVEAVKAWPIIVKPDLGQGGQGVTLANDPQQARAAMDAMQFPVLV
EEEECCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCEEE
EYLPGEEITVDCFTDRKRRLVWTGPRTRERVRAGITMRSRLLALSPEIEGIAREINQRLQ
EECCCCEEEEEEECCCCCEEEECCCCHHHHHHHCCHHHHHEEEECCCHHHHHHHHHHHEE
LRGPWFFQLKADKDGRWKLLEISCRVAGTMVAQRARGVNLPLMAVQDHLGRDLVALDNPH
ECCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCC
VNLVERSIATRTRLDFAYDSVFVDLDDTLVLNGHAVPQTMAFLYQSKADGKKVNLITRHA
HHHHHHHHHHHHHHEEEECEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEEHHH
FDVAQTLEKAHISRGIFDQIIVITDGGSKADHFSPDSIFIDNHFPERLEVARKLAIPVLD
HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEC
VDMVEFLIK
HHHHHHHCC
>Mature Secondary Structure
MNASMNKKLKVLVFPCGSENAAEIHQALRYSLHVELFGASSVDDHGRFRFERYVGGLPKI
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCEEHHHHHCCCCCC
SDAEFDSTFSRLLVELDIDVVFATHDSVLDYLAPRAPGMGVTLINGDPQTAAIARRKSAT
CCCCHHHHHHHHEEEEEEEEEEEEHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCCE
YACFRDADWAPHMFESVEAVKAWPIIVKPDLGQGGQGVTLANDPQQARAAMDAMQFPVLV
EEEECCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCEEE
EYLPGEEITVDCFTDRKRRLVWTGPRTRERVRAGITMRSRLLALSPEIEGIAREINQRLQ
EECCCCEEEEEEECCCCCEEEECCCCHHHHHHHCCHHHHHEEEECCCHHHHHHHHHHHEE
LRGPWFFQLKADKDGRWKLLEISCRVAGTMVAQRARGVNLPLMAVQDHLGRDLVALDNPH
ECCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCC
VNLVERSIATRTRLDFAYDSVFVDLDDTLVLNGHAVPQTMAFLYQSKADGKKVNLITRHA
HHHHHHHHHHHHHHEEEECEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEEHHH
FDVAQTLEKAHISRGIFDQIIVITDGGSKADHFSPDSIFIDNHFPERLEVARKLAIPVLD
HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEC
VDMVEFLIK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA