| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314138
Identifier: 94314138
GI number: 94314138
Start: 1913121
End: 1913687
Strand: Direct
Name: 94314138
Synonym: Rmet_5219
Alternate gene names: NA
Gene position: 1913121-1913687 (Clockwise)
Preceding gene: 94314137
Following gene: 94314140
Centisome position: 74.15
GC content: 56.97
Gene sequence:
>567_bases ATGCTTAAACGTCTGATATCGATTCTCGCAGTCTTGTCGCTGCTGTTACCGATTTCTTCTGCCTGGGCGGACGAGTACAC CGACACGATCAAACTCTTCAAGAATGCAGGAGAAAGTGGCCAGCTCCTCAAATCTGCTTACGGCTACGCGGTATTTCCTA CAATTGGCAAGGGGGCTGTCGGCATAGGTGGGGCCCATGGCAAGGGCCGTGTGTACGAAAAGGGAAAGTATATCGGCGAC ACGTCGATGACCCAGGTGACCGTGGGCCTGCAGCTCGGCGGCGAAGCCTATAGCGAGATGATCGTGTTCGAGGATGAACG GGCGCTCAAGGAATTTACCGGTGGTAACTTTGAGTTCGGCGCAGATGCCTCTGCGGTTGCGATTACGGCGGCTGCGGGCG CACAGACAAGCACGACAGGCACGTCTGCGCGTGCGAGCGCCGGCAAGAAAGACGCCAAGACCGCGGGTGGCTATCACAAG GGCATGGCGACATTTACAGTGACCAAGGGCGGCTTGATGTACGAGGCGAGCATTGGTGGCCAGAAGTTCAGCTACAAGCC TCACTGA
Upstream 100 bases:
>100_bases GACTGTTTTTGTCGCAGCAGCATAATTGAAAAGACGTGGGCAGAAGTGTGACGCGGTAGTGCTGTACACGATGAGTTTCA ACCACGATGGAGAACAAATC
Downstream 100 bases:
>100_bases CTCTCGCTACGGGGGGCAAAAAATCAATGAGCTTGTTCTCAGGGCTTAGGGGAAGCGACCTGGATACGCTTTTGTTCTTG GCCTCACCTCCGTTATCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MLKRLISILAVLSLLLPISSAWADEYTDTIKLFKNAGESGQLLKSAYGYAVFPTIGKGAVGIGGAHGKGRVYEKGKYIGD TSMTQVTVGLQLGGEAYSEMIVFEDERALKEFTGGNFEFGADASAVAITAAAGAQTSTTGTSARASAGKKDAKTAGGYHK GMATFTVTKGGLMYEASIGGQKFSYKPH
Sequences:
>Translated_188_residues MLKRLISILAVLSLLLPISSAWADEYTDTIKLFKNAGESGQLLKSAYGYAVFPTIGKGAVGIGGAHGKGRVYEKGKYIGD TSMTQVTVGLQLGGEAYSEMIVFEDERALKEFTGGNFEFGADASAVAITAAAGAQTSTTGTSARASAGKKDAKTAGGYHK GMATFTVTKGGLMYEASIGGQKFSYKPH >Mature_188_residues MLKRLISILAVLSLLLPISSAWADEYTDTIKLFKNAGESGQLLKSAYGYAVFPTIGKGAVGIGGAHGKGRVYEKGKYIGD TSMTQVTVGLQLGGEAYSEMIVFEDERALKEFTGGNFEFGADASAVAITAAAGAQTSTTGTSARASAGKKDAKTAGGYHK GMATFTVTKGGLMYEASIGGQKFSYKPH
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19554; Mature: 19554
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRLISILAVLSLLLPISSAWADEYTDTIKLFKNAGESGQLLKSAYGYAVFPTIGKGAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCCCCE GIGGAHGKGRVYEKGKYIGDTSMTQVTVGLQLGGEAYSEMIVFEDERALKEFTGGNFEFG ECCCCCCCCCEEECCCCCCCCCEEEEEEEEEECCHHHHCEEEECCHHHHHHHCCCCEEEC ADASAVAITAAAGAQTSTTGTSARASAGKKDAKTAGGYHKGMATFTVTKGGLMYEASIGG CCCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHCCCCCCCEEEEEEECCCEEEEECCCC QKFSYKPH CCCCCCCC >Mature Secondary Structure MLKRLISILAVLSLLLPISSAWADEYTDTIKLFKNAGESGQLLKSAYGYAVFPTIGKGAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCCCCE GIGGAHGKGRVYEKGKYIGDTSMTQVTVGLQLGGEAYSEMIVFEDERALKEFTGGNFEFG ECCCCCCCCCEEECCCCCCCCCEEEEEEEEEECCHHHHCEEEECCHHHHHHHCCCCEEEC ADASAVAITAAAGAQTSTTGTSARASAGKKDAKTAGGYHKGMATFTVTKGGLMYEASIGG CCCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHCCCCCCCEEEEEEECCCEEEEECCCC QKFSYKPH CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA