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The map label for this gene is omp32 [H]

Identifier: 94314109

GI number: 94314109

Start: 1883912

End: 1885027

Strand: Reverse

Name: omp32 [H]

Synonym: Rmet_5190

Alternate gene names: 94314109

Gene position: 1885027-1883912 (Counterclockwise)

Preceding gene: 94314110

Following gene: 94314106

Centisome position: 73.06

GC content: 64.96

Gene sequence:

>1116_bases
ATGGAACCGTTGTACCGGGGGCGGCTCGCACCGTTCGTTGCCTCTTTTCCCGTGCTGCTCTGTGCAGCCACCCCAGCCGC
CGCCCAGAGCGACGGCGTGCAGATCTACGGTTTCATCAAGGAGAACGTCGAGTCGATCCAGATTTCCGGGAACGGGCGCA
GCCAGTCCCTGGCACGCCTGTCCAACGATCTGTCGGTGCTCGGCTTTCGCGGCGGGGAGTCGCTGGGAGGCGGCAACCGT
GCCTTCTTCCAGATCGAGACGAACCTGCGCATGGACGGCACCGGCACCGCGCAGATCGGTGACCGCAATACTGCCGTTGG
TCTGAGCGGCCCCTGGGGGCAGTTCTGGATGGGGCAGTGGGAGATGCCTCTGCGCTACGTGTCGGTGTACAAGGTGGACC
CGTTCACGGCAGGGATCTTTGCGTCCAACTCGATCATGGGGAATGGCTTCGTGACCGCCGCGAATGGCGTCTCGCCGCAG
TCGTTTGACCGTCGCCAGCCCAACCTTGTCCAGTACGCCACGCCGGACTGGGGCGGTGTTTCGGCGCGCGTGGCGGTATC
GATGCCGGAAAACCGCACGGCCACCACGAATCCGATTGCCTGGTCTGGGCTGGTCAGCTACGAATCCGGCCAATGGTATG
CGGCGTGGGGCCACGAGTACCACGGCGATTATTTCTATAGTGGCTCGCACGACTACGCCGATCGGGTCGGACTGGTGTAC
GCCATCGGCGGCGTCAGATTGCGCGCCGCCTATGAGCGACTCAGCTACGAGCCTGCGCCGGGGCAGTCGGTGCGGCGCGA
TGCGTGGCAGGCTGCGGCTACCTACAACCGCGGGCCACATACGTTCCGTGCGTCGTACACGCAGGGGGGCAATGCCCACG
GCAACACCGTCCAGGCCGTGGGCGGTATCGGCCTGCCGGGCACTGATTCCGGCGCGTGGCAGGTGTCGCTGGGCTATGGC
TATACGCTGTCAAAGCGCACCGAACTCTGGGCGGCCTATACGCGTCTGGTTAACCACGCCACCGCCAGCTACAACCTGTC
GGCCAATTCCGTGCCCGGCCTGAAGGCAGGCGATGCGGTCAGCGGCTTCGGTCTGGGCATCACCCACAATTTCTGA

Upstream 100 bases:

>100_bases
GGCCTCCATGCAATGAATACTGTTTCTTATTGGTGTATACACGAACTTCAAATATGAGTTCGTTTGTGAGAAACTGTACT
CATAACGACATGGAGACAAA

Downstream 100 bases:

>100_bases
TCCCCCATCGTTGCCGCCTTCAACCGAAAGTTGTCAGGCGGCCTGGTGGCAGACTGCTTCGATGTTGTGGCCGTCTGGAT
CGAGAACGAAGGCGCCGTAG

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MEPLYRGRLAPFVASFPVLLCAATPAAAQSDGVQIYGFIKENVESIQISGNGRSQSLARLSNDLSVLGFRGGESLGGGNR
AFFQIETNLRMDGTGTAQIGDRNTAVGLSGPWGQFWMGQWEMPLRYVSVYKVDPFTAGIFASNSIMGNGFVTAANGVSPQ
SFDRRQPNLVQYATPDWGGVSARVAVSMPENRTATTNPIAWSGLVSYESGQWYAAWGHEYHGDYFYSGSHDYADRVGLVY
AIGGVRLRAAYERLSYEPAPGQSVRRDAWQAAATYNRGPHTFRASYTQGGNAHGNTVQAVGGIGLPGTDSGAWQVSLGYG
YTLSKRTELWAAYTRLVNHATASYNLSANSVPGLKAGDAVSGFGLGITHNF

Sequences:

>Translated_371_residues
MEPLYRGRLAPFVASFPVLLCAATPAAAQSDGVQIYGFIKENVESIQISGNGRSQSLARLSNDLSVLGFRGGESLGGGNR
AFFQIETNLRMDGTGTAQIGDRNTAVGLSGPWGQFWMGQWEMPLRYVSVYKVDPFTAGIFASNSIMGNGFVTAANGVSPQ
SFDRRQPNLVQYATPDWGGVSARVAVSMPENRTATTNPIAWSGLVSYESGQWYAAWGHEYHGDYFYSGSHDYADRVGLVY
AIGGVRLRAAYERLSYEPAPGQSVRRDAWQAAATYNRGPHTFRASYTQGGNAHGNTVQAVGGIGLPGTDSGAWQVSLGYG
YTLSKRTELWAAYTRLVNHATASYNLSANSVPGLKAGDAVSGFGLGITHNF
>Mature_371_residues
MEPLYRGRLAPFVASFPVLLCAATPAAAQSDGVQIYGFIKENVESIQISGNGRSQSLARLSNDLSVLGFRGGESLGGGNR
AFFQIETNLRMDGTGTAQIGDRNTAVGLSGPWGQFWMGQWEMPLRYVSVYKVDPFTAGIFASNSIMGNGFVTAANGVSPQ
SFDRRQPNLVQYATPDWGGVSARVAVSMPENRTATTNPIAWSGLVSYESGQWYAAWGHEYHGDYFYSGSHDYADRVGLVY
AIGGVRLRAAYERLSYEPAPGQSVRRDAWQAAATYNRGPHTFRASYTQGGNAHGNTVQAVGGIGLPGTDSGAWQVSLGYG
YTLSKRTELWAAYTRLVNHATASYNLSANSVPGLKAGDAVSGFGLGITHNF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39805; Mature: 39805

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPLYRGRLAPFVASFPVLLCAATPAAAQSDGVQIYGFIKENVESIQISGNGRSQSLARL
CCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHH
SNDLSVLGFRGGESLGGGNRAFFQIETNLRMDGTGTAQIGDRNTAVGLSGPWGQFWMGQW
CCCCEEEEECCCCCCCCCCEEEEEEEECEEECCCCCEEECCCCEEEECCCCCHHHCCCCC
EMPLRYVSVYKVDPFTAGIFASNSIMGNGFVTAANGVSPQSFDRRQPNLVQYATPDWGGV
CCCEEEEEEEEECCCEEEEEECCCEECCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCC
SARVAVSMPENRTATTNPIAWSGLVSYESGQWYAAWGHEYHGDYFYSGSHDYADRVGLVY
EEEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCEEECCCCCHHHHCEEEE
AIGGVRLRAAYERLSYEPAPGQSVRRDAWQAAATYNRGPHTFRASYTQGGNAHGNTVQAV
EECCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEE
GGIGLPGTDSGAWQVSLGYGYTLSKRTELWAAYTRLVNHATASYNLSANSVPGLKAGDAV
CCCCCCCCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC
SGFGLGITHNF
CCCCEEEEECC
>Mature Secondary Structure
MEPLYRGRLAPFVASFPVLLCAATPAAAQSDGVQIYGFIKENVESIQISGNGRSQSLARL
CCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHH
SNDLSVLGFRGGESLGGGNRAFFQIETNLRMDGTGTAQIGDRNTAVGLSGPWGQFWMGQW
CCCCEEEEECCCCCCCCCCEEEEEEEECEEECCCCCEEECCCCEEEECCCCCHHHCCCCC
EMPLRYVSVYKVDPFTAGIFASNSIMGNGFVTAANGVSPQSFDRRQPNLVQYATPDWGGV
CCCEEEEEEEEECCCEEEEEECCCEECCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCC
SARVAVSMPENRTATTNPIAWSGLVSYESGQWYAAWGHEYHGDYFYSGSHDYADRVGLVY
EEEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCEEECCCCCHHHHCEEEE
AIGGVRLRAAYERLSYEPAPGQSVRRDAWQAAATYNRGPHTFRASYTQGGNAHGNTVQAV
EECCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEE
GGIGLPGTDSGAWQVSLGYGYTLSKRTELWAAYTRLVNHATASYNLSANSVPGLKAGDAV
CCCCCCCCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC
SGFGLGITHNF
CCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]