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The map label for this gene is ydiI [C]

Identifier: 94314103

GI number: 94314103

Start: 1877726

End: 1878154

Strand: Reverse

Name: ydiI [C]

Synonym: Rmet_5184

Alternate gene names: 94314103

Gene position: 1878154-1877726 (Counterclockwise)

Preceding gene: 94314106

Following gene: 94314100

Centisome position: 72.79

GC content: 58.74

Gene sequence:

>429_bases
ATGGACATTAATCCCCCCGTTACGCTGGAAGAATGGAACGCGGCCGGTGCTGATTATTTGCCTGGCCTTCTTGGCATGTG
CTTTGTCAAAGTGGAGCCGGATGAAGTAGTGGCGACGCTTGAGGTGCGTCGTGCCTTGGGCGCCTGGAATGGCTACTTGC
ATGCGGGAACGGTAGTCTCGCTCGCGGACACATGCTGCGGCTATGGAACCGTGCGAAGCTTACCAGCCGGGGCCAGCGGG
TTCACCACAGTGGAACTCAAGAGCAACATGCTTGGAACGGCCCGCGATGGCATTGTGATTTGCACCGCGCGCCCCATTCA
CAAAGGGCGCACGACTCAGGTCTGGGATGCTGAGGTCCGCCGCGGTGGCGACAACGCCCTGATCGCTAGTTTTCGCAACA
CGCAATTGATTCTCTGGCCCAAAGGGTAA

Upstream 100 bases:

>100_bases
GCTGCAGGAAGATTCTTCGTTAGGGTGTCCGTTTGTCGCTGCAGCCTGAACAGGAAGGCCCGTAGAATGCGAGATTGCCC
TGTAACCATCGAGGTAACTA

Downstream 100 bases:

>100_bases
TCGCTGCGGCTCGTCGTTCTCGGCCGCTGGATGGTCTGCATGGCCATCCAGCATTCAGCGGCACTCATAGGTTGAATGCG
CGCTTGGCATGCTTTTGGCT

Product: putative esterase

Products: NA

Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Family Protein; Esterase; Phenylacetic Acid Degradation Protein PaaI; PaaI Thioesterase; ComA-Related Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDINPPVTLEEWNAAGADYLPGLLGMCFVKVEPDEVVATLEVRRALGAWNGYLHAGTVVSLADTCCGYGTVRSLPAGASG
FTTVELKSNMLGTARDGIVICTARPIHKGRTTQVWDAEVRRGGDNALIASFRNTQLILWPKG

Sequences:

>Translated_142_residues
MDINPPVTLEEWNAAGADYLPGLLGMCFVKVEPDEVVATLEVRRALGAWNGYLHAGTVVSLADTCCGYGTVRSLPAGASG
FTTVELKSNMLGTARDGIVICTARPIHKGRTTQVWDAEVRRGGDNALIASFRNTQLILWPKG
>Mature_142_residues
MDINPPVTLEEWNAAGADYLPGLLGMCFVKVEPDEVVATLEVRRALGAWNGYLHAGTVVSLADTCCGYGTVRSLPAGASG
FTTVELKSNMLGTARDGIVICTARPIHKGRTTQVWDAEVRRGGDNALIASFRNTQLILWPKG

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15203; Mature: 15203

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINPPVTLEEWNAAGADYLPGLLGMCFVKVEPDEVVATLEVRRALGAWNGYLHAGTVVS
CCCCCCCEEECCCCCCCHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHCCCEEECCHHHH
LADTCCGYGTVRSLPAGASGFTTVELKSNMLGTARDGIVICTARPIHKGRTTQVWDAEVR
HHHHHCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEECHHHH
RGGDNALIASFRNTQLILWPKG
CCCCCEEEEEECCCEEEEEECC
>Mature Secondary Structure
MDINPPVTLEEWNAAGADYLPGLLGMCFVKVEPDEVVATLEVRRALGAWNGYLHAGTVVS
CCCCCCCEEECCCCCCCHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHCCCEEECCHHHH
LADTCCGYGTVRSLPAGASGFTTVELKSNMLGTARDGIVICTARPIHKGRTTQVWDAEVR
HHHHHCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEECHHHH
RGGDNALIASFRNTQLILWPKG
CCCCCEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA