| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94314101
Identifier: 94314101
GI number: 94314101
Start: 1876053
End: 1876694
Strand: Direct
Name: 94314101
Synonym: Rmet_5182
Alternate gene names: NA
Gene position: 1876053-1876694 (Clockwise)
Preceding gene: 94314097
Following gene: 94314102
Centisome position: 72.71
GC content: 59.81
Gene sequence:
>642_bases TTGCCGACCAGGTGGTCACGCATAAGGTGCGTGATGGGTACGCTTCGGTCGAGAAGGATCGCAGTCGCCGGGCATCGATT GCATCGATCCTCGCGCACGGCCGACTTTCTCGAATATCGTGGATGTTGCCGAGCAGGCGTCGCCGCGTGGCATCTTGCAT GGAGTTTCCAGGAAATCCCCGTGAGTGACTTTAGGAGTCACCAGTCCTCAGACGTCGTCGAGGGGGAAGCCCGGAAACGA GCGAAGGCGCTCCGAAAACCCATGATCATCGGGAACGCTCTAGCTAAGAGTATAGGGGGACGTTGCATCCCCTCCTATCG TCCTTACAAAATGGCTCGGCAAGCGTTGCGTCGTGTACTTCCAATCAAGCTCGAACCACGCGCCGAAGACGATCCATCCC TGTCTGATCATACGGCCCGTTGCGCGGTCCGGCTTCCAGAGGTTGGTCCACCAAGGCCCCTCGCCTACGCGATCAACGGA CTGAACCATGTCAGTTGCGACGCCCACCATCAGCCCGCTACGCCAGCGCATGATCGAAGACATACAGATTCGAGAGTCTG CGCTCCGACAGCGGGGCCTGGGGCCGAGCGCATTGTGCTCGAGGTCGCGGATATCTTCCGCCTCCACGGTCCACCAGCTT GA
Upstream 100 bases:
>100_bases ACGACTGTGGAGTGATTTCGCCTCAGCGCGATCCCAGTCGAACAATAGCGTGACTGCCCATGCCATTGAGTGGCCACTAT GCGTATGAATCCTGGTCTCC
Downstream 100 bases:
>100_bases ACCTCGGGCAGTTGCATGTCATGTCGGGCATCGAACAGTGCCGCACCGGGGCATAGGACGAGCTTGTCTTGCACCGTTCC GATTGCGCCAAGTTCGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPTRWSRIRCVMGTLRSRRIAVAGHRLHRSSRTADFLEYRGCCRAGVAAWHLAWSFQEIPVSDFRSHQSSDVVEGEARKR AKALRKPMIIGNALAKSIGGRCIPSYRPYKMARQALRRVLPIKLEPRAEDDPSLSDHTARCAVRLPEVGPPRPLAYAING LNHVSCDAHHQPATPAHDRRHTDSRVCAPTAGPGAERIVLEVADIFRLHGPPA
Sequences:
>Translated_213_residues MPTRWSRIRCVMGTLRSRRIAVAGHRLHRSSRTADFLEYRGCCRAGVAAWHLAWSFQEIPVSDFRSHQSSDVVEGEARKR AKALRKPMIIGNALAKSIGGRCIPSYRPYKMARQALRRVLPIKLEPRAEDDPSLSDHTARCAVRLPEVGPPRPLAYAING LNHVSCDAHHQPATPAHDRRHTDSRVCAPTAGPGAERIVLEVADIFRLHGPPA >Mature_212_residues PTRWSRIRCVMGTLRSRRIAVAGHRLHRSSRTADFLEYRGCCRAGVAAWHLAWSFQEIPVSDFRSHQSSDVVEGEARKRA KALRKPMIIGNALAKSIGGRCIPSYRPYKMARQALRRVLPIKLEPRAEDDPSLSDHTARCAVRLPEVGPPRPLAYAINGL NHVSCDAHHQPATPAHDRRHTDSRVCAPTAGPGAERIVLEVADIFRLHGPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23694; Mature: 23562
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRWSRIRCVMGTLRSRRIAVAGHRLHRSSRTADFLEYRGCCRAGVAAWHLAWSFQEIP CCCHHHHHHHHHHHHHHCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC VSDFRSHQSSDVVEGEARKRAKALRKPMIIGNALAKSIGGRCIPSYRPYKMARQALRRVL HHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC PIKLEPRAEDDPSLSDHTARCAVRLPEVGPPRPLAYAINGLNHVSCDAHHQPATPAHDRR CCEECCCCCCCCCCCCCHHHHEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC HTDSRVCAPTAGPGAERIVLEVADIFRLHGPPA CCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PTRWSRIRCVMGTLRSRRIAVAGHRLHRSSRTADFLEYRGCCRAGVAAWHLAWSFQEIP CCHHHHHHHHHHHHHHCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC VSDFRSHQSSDVVEGEARKRAKALRKPMIIGNALAKSIGGRCIPSYRPYKMARQALRRVL HHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC PIKLEPRAEDDPSLSDHTARCAVRLPEVGPPRPLAYAINGLNHVSCDAHHQPATPAHDRR CCEECCCCCCCCCCCCCHHHHEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC HTDSRVCAPTAGPGAERIVLEVADIFRLHGPPA CCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA