| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314081
Identifier: 94314081
GI number: 94314081
Start: 1861951
End: 1863249
Strand: Direct
Name: 94314081
Synonym: Rmet_5162
Alternate gene names: NA
Gene position: 1861951-1863249 (Clockwise)
Preceding gene: 94314080
Following gene: 94314083
Centisome position: 72.17
GC content: 66.51
Gene sequence:
>1299_bases ATGACCCTGAACGCCACCACACTTGACCAGCGTATTGGCGACGCCTTCGTCTACACCTTCCCCTTGCATGACGTGGCGCG TACGCGCTGGCGCCTCACACAGCAGGAAGCCACGCGCGGCAAGCCGCCCAACCGGCTGCATCACAGCCGGCACCTGCTGG ACGATCGCGCCCGGCAGGTGACAATGCCCAATAACGACACGTTGTACTCGTCGGCGTGGCTCGACCTGTCCGACGCACCC GTGACGCTGGCGATGCCTGACATGGGTGACCGCTACTACAGCGTGGCACTGCTCGATGCCTTCACAAACAACTTCGCCTG CCTGGGCCCGCGCACCAACGGCCCTGGTGCCCACACGTTCGTGATAGCTGGCCCGGCACACCATGCCAGCGCGGCAAAGG CGCTACCGGTCGGCGCGACGCTGGTCCGGGCGCCTTGCAACGATGTCTGGCTGCTGACGCGCACGCTCATCGACGGCGAA CACGATGCGCCCGCCGTGCATGCACTTCAGGAGCAGATGCAGCTGCAGGCCAGCACCAGGGAACCCGAACGGTTCGTCAC CACACCCGACGAATCCAGTCCGGCGGCATATCTGTCGCTCGTCAACGAGGCCCTGGCGCGCAACGGCGTACCCGCCGAGG AACAGTTCATGGTCGACGGGTGGGCCGATCTTGGCATCCGGGGTGGCTCGCTGGATGCATGGAGCACGCTCGATCCGCAG GTGCGCGATGCCTGGACACGACTGTGGCCGGCGCTGCGCCACCGGCTCGAACACCCGCCCAAGGGCAGCATCCGTCGAAG CGGCCCCAAGGGCTCGTGGCTCAGCGGCACGGACCACATCGGCAACTTTGGCAAGGACTACGTGTACCGCGCCTACATCG CGCTCGTCGGACTCGGCGCGCTAGAGCGCGCGGAGGCAATCTATGCAACCGCCCAGGTGGATGGCGACGGACAGGCATTC GACGGTGGGCACCGCTATCGGCTGCACGTGCCGGCGAACATGCCCGTCGACGCATTCTGGTCGTTGTCGATGTACGAGTT CGAACCGGATGGCCGGCGCTTCTTCACGGCCAACCCGATCCGCCGTTATGCGATTGGGGACCGCACGCCCGGACTGATCC GCAATGCGGACGGATCGCTCGACATCGCCATCCAGCACGCGCAACCCGAGGCCGGTACCGCCAATTGGCTGCCCGCGCCT GCTGGCCGGTTCTCGATGGCCCTGCGGTACTACCACCCGCAGGCCGACCTGATCGAGCACCGGTTCGTGATGGCGGACAC GGAGCGCGTCGCCGGGTAA
Upstream 100 bases:
>100_bases GCAATTCGCGCAGACCGTGCGCGATGACGTGACGGCGTGGGGCAACGTGATCCGCGCCAACCACATCACCGTGGACTGAC CATCGAAACCCGAAGACACC
Downstream 100 bases:
>100_bases CCGGGGCGGGGTGGTCCGATGCGTCGGTGCCCCGCCTGACGGCCGTCAGAACGCGCCGCCCTTGCAGTCGCCCGGCAGGT TCCTTTAAGAAGCTTGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTLNATTLDQRIGDAFVYTFPLHDVARTRWRLTQQEATRGKPPNRLHHSRHLLDDRARQVTMPNNDTLYSSAWLDLSDAP VTLAMPDMGDRYYSVALLDAFTNNFACLGPRTNGPGAHTFVIAGPAHHASAAKALPVGATLVRAPCNDVWLLTRTLIDGE HDAPAVHALQEQMQLQASTREPERFVTTPDESSPAAYLSLVNEALARNGVPAEEQFMVDGWADLGIRGGSLDAWSTLDPQ VRDAWTRLWPALRHRLEHPPKGSIRRSGPKGSWLSGTDHIGNFGKDYVYRAYIALVGLGALERAEAIYATAQVDGDGQAF DGGHRYRLHVPANMPVDAFWSLSMYEFEPDGRRFFTANPIRRYAIGDRTPGLIRNADGSLDIAIQHAQPEAGTANWLPAP AGRFSMALRYYHPQADLIEHRFVMADTERVAG
Sequences:
>Translated_432_residues MTLNATTLDQRIGDAFVYTFPLHDVARTRWRLTQQEATRGKPPNRLHHSRHLLDDRARQVTMPNNDTLYSSAWLDLSDAP VTLAMPDMGDRYYSVALLDAFTNNFACLGPRTNGPGAHTFVIAGPAHHASAAKALPVGATLVRAPCNDVWLLTRTLIDGE HDAPAVHALQEQMQLQASTREPERFVTTPDESSPAAYLSLVNEALARNGVPAEEQFMVDGWADLGIRGGSLDAWSTLDPQ VRDAWTRLWPALRHRLEHPPKGSIRRSGPKGSWLSGTDHIGNFGKDYVYRAYIALVGLGALERAEAIYATAQVDGDGQAF DGGHRYRLHVPANMPVDAFWSLSMYEFEPDGRRFFTANPIRRYAIGDRTPGLIRNADGSLDIAIQHAQPEAGTANWLPAP AGRFSMALRYYHPQADLIEHRFVMADTERVAG >Mature_431_residues TLNATTLDQRIGDAFVYTFPLHDVARTRWRLTQQEATRGKPPNRLHHSRHLLDDRARQVTMPNNDTLYSSAWLDLSDAPV TLAMPDMGDRYYSVALLDAFTNNFACLGPRTNGPGAHTFVIAGPAHHASAAKALPVGATLVRAPCNDVWLLTRTLIDGEH DAPAVHALQEQMQLQASTREPERFVTTPDESSPAAYLSLVNEALARNGVPAEEQFMVDGWADLGIRGGSLDAWSTLDPQV RDAWTRLWPALRHRLEHPPKGSIRRSGPKGSWLSGTDHIGNFGKDYVYRAYIALVGLGALERAEAIYATAQVDGDGQAFD GGHRYRLHVPANMPVDAFWSLSMYEFEPDGRRFFTANPIRRYAIGDRTPGLIRNADGSLDIAIQHAQPEAGTANWLPAPA GRFSMALRYYHPQADLIEHRFVMADTERVAG
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47806; Mature: 47675
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNATTLDQRIGDAFVYTFPLHDVARTRWRLTQQEATRGKPPNRLHHSRHLLDDRARQV CCCCCCHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEE TMPNNDTLYSSAWLDLSDAPVTLAMPDMGDRYYSVALLDAFTNNFACLGPRTNGPGAHTF ECCCCCCEEEEEEEECCCCCEEEECCCCCCCEEEEEEEEHHCCCEEEECCCCCCCCCEEE VIAGPAHHASAAKALPVGATLVRAPCNDVWLLTRTLIDGEHDAPAVHALQEQMQLQASTR EEECCCCCCHHHCCCCCCCEEEECCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHCCC EPERFVTTPDESSPAAYLSLVNEALARNGVPAEEQFMVDGWADLGIRGGSLDAWSTLDPQ CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEECHHHCCCCCCCCCCCCCCCCH VRDAWTRLWPALRHRLEHPPKGSIRRSGPKGSWLSGTDHIGNFGKDYVYRAYIALVGLGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCH LERAEAIYATAQVDGDGQAFDGGHRYRLHVPANMPVDAFWSLSMYEFEPDGRRFFTANPI HHHHHEEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHEEEEEEEEECCCCCEEEECCCC RRYAIGDRTPGLIRNADGSLDIAIQHAQPEAGTANWLPAPAGRFSMALRYYHPQADLIEH EEEECCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHEEEEEEECCCHHHHHH RFVMADTERVAG EEEEECHHHHCC >Mature Secondary Structure TLNATTLDQRIGDAFVYTFPLHDVARTRWRLTQQEATRGKPPNRLHHSRHLLDDRARQV CCCCCHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEE TMPNNDTLYSSAWLDLSDAPVTLAMPDMGDRYYSVALLDAFTNNFACLGPRTNGPGAHTF ECCCCCCEEEEEEEECCCCCEEEECCCCCCCEEEEEEEEHHCCCEEEECCCCCCCCCEEE VIAGPAHHASAAKALPVGATLVRAPCNDVWLLTRTLIDGEHDAPAVHALQEQMQLQASTR EEECCCCCCHHHCCCCCCCEEEECCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHCCC EPERFVTTPDESSPAAYLSLVNEALARNGVPAEEQFMVDGWADLGIRGGSLDAWSTLDPQ CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEECHHHCCCCCCCCCCCCCCCCH VRDAWTRLWPALRHRLEHPPKGSIRRSGPKGSWLSGTDHIGNFGKDYVYRAYIALVGLGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCH LERAEAIYATAQVDGDGQAFDGGHRYRLHVPANMPVDAFWSLSMYEFEPDGRRFFTANPI HHHHHEEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHEEEEEEEEECCCCCEEEECCCC RRYAIGDRTPGLIRNADGSLDIAIQHAQPEAGTANWLPAPAGRFSMALRYYHPQADLIEH EEEECCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHEEEEEEECCCHHHHHH RFVMADTERVAG EEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA