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The map label for this gene is omp32 [H]

Identifier: 94314037

GI number: 94314037

Start: 1811909

End: 1812976

Strand: Direct

Name: omp32 [H]

Synonym: Rmet_5118

Alternate gene names: 94314037

Gene position: 1811909-1812976 (Clockwise)

Preceding gene: 94314036

Following gene: 94314038

Centisome position: 70.23

GC content: 63.2

Gene sequence:

>1068_bases
ATGAATGTTCGTCACGGCGTTGCGATGGCAACCCTGGGGATGATTGCAGGCACCGCGTCCGCGCAATCCAGCGTCACGCT
TTATGGCGTCGCCGACGTTGGTATCGAGTACCTCAGCAACGTGCCTTCCGCCAACGGCGGCGCCAGCCAGGTACGGATGG
CATCCGGCAACATGTCCACATCCCGCTGGGGCATTCGTGGTGTCGAGGATCTCGGCGGCGGCCTGAAGGCGATCTTCGAT
CTCGAAAGCGGTATTTCGCTCGATACCGGCGCGCAAAACAACCGGACCCGGCTCTTCGATCGGACGTCTATCGTAGGTCT
GAGCAGCAAGTACGGAACCGTCACGTTGGGCCGCCAGACCACCCCGCTGTATGACACCGCGATCCAACTCGACCCGATGG
GCTTTGCGCCGCGGTACTCGCTCTACAAGAGTGACGACGTGCTGGCCGGCCGCGCGGACAACTCAATCAAGTACCGTGGC
ACGTTCAACGGACTAACCGCCAGCGGCTTGTACAGTTTCAGCCGAACCGGCGGCGGAGAGGTCCCCGGCAACTACACCCT
CGACCGCAATCTCGGTATCTCGTTGTCCTATGAGGTGAGTTCCTTCGCGATCGGCGCGGTATATGACGAGTACCAGGGCT
CCACGCTTGCTACCGCCGAACGCAAGGACCGGCGCATGCTGGTCGGCGCGAGCTACGCCTTCGGCCCGGCAAAGGCCTTC
ATCGGCTATCGCTGGTACAACGGCAACGTCGGCGCCATGCCGACCGACCGCTCCGATCTGTACTGGGCGGGTCTGCGTTA
CAGCGTGACGCCCGCGCTGAAGCTGACCGGCGCGGCGTACTACACGAACATGCGCAACGCCGGGGCCGACCCGATCATGT
TCGTCGCCTCGGCGGACTATGCATTCTCCAAGCGCACGGACGTGTACATGAATGCCGGCTACGCGCTGAACCGCGGCAAC
TCCCAGCTCGGCATGAACGGATTCAACACGCCGAGCGGCAGCCCGACCAACGTCGTTCCCGGCAAGGACCAGACTGGCCT
GGTGGTCGGCGTGCGCCACAAGTTCTGA

Upstream 100 bases:

>100_bases
CCGCGCCCGGAACGATGCGGCTGTAATCTCGCCGCAATCGAAACGAAATGTCGGCATTTCTATACTCGCCGCTCCAATTC
AATAACTGGAGAGAGAGTCC

Downstream 100 bases:

>100_bases
ACCGTCGAGCGATCGCCAGCATCGACACTTTCTTGCGAGGGCAAGAGGGTTCTTGGCCTCCGGCTTCCGGAGGCCTTTTT
TGTTTGCCATCGCCCGGGAT

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNVRHGVAMATLGMIAGTASAQSSVTLYGVADVGIEYLSNVPSANGGASQVRMASGNMSTSRWGIRGVEDLGGGLKAIFD
LESGISLDTGAQNNRTRLFDRTSIVGLSSKYGTVTLGRQTTPLYDTAIQLDPMGFAPRYSLYKSDDVLAGRADNSIKYRG
TFNGLTASGLYSFSRTGGGEVPGNYTLDRNLGISLSYEVSSFAIGAVYDEYQGSTLATAERKDRRMLVGASYAFGPAKAF
IGYRWYNGNVGAMPTDRSDLYWAGLRYSVTPALKLTGAAYYTNMRNAGADPIMFVASADYAFSKRTDVYMNAGYALNRGN
SQLGMNGFNTPSGSPTNVVPGKDQTGLVVGVRHKF

Sequences:

>Translated_355_residues
MNVRHGVAMATLGMIAGTASAQSSVTLYGVADVGIEYLSNVPSANGGASQVRMASGNMSTSRWGIRGVEDLGGGLKAIFD
LESGISLDTGAQNNRTRLFDRTSIVGLSSKYGTVTLGRQTTPLYDTAIQLDPMGFAPRYSLYKSDDVLAGRADNSIKYRG
TFNGLTASGLYSFSRTGGGEVPGNYTLDRNLGISLSYEVSSFAIGAVYDEYQGSTLATAERKDRRMLVGASYAFGPAKAF
IGYRWYNGNVGAMPTDRSDLYWAGLRYSVTPALKLTGAAYYTNMRNAGADPIMFVASADYAFSKRTDVYMNAGYALNRGN
SQLGMNGFNTPSGSPTNVVPGKDQTGLVVGVRHKF
>Mature_355_residues
MNVRHGVAMATLGMIAGTASAQSSVTLYGVADVGIEYLSNVPSANGGASQVRMASGNMSTSRWGIRGVEDLGGGLKAIFD
LESGISLDTGAQNNRTRLFDRTSIVGLSSKYGTVTLGRQTTPLYDTAIQLDPMGFAPRYSLYKSDDVLAGRADNSIKYRG
TFNGLTASGLYSFSRTGGGEVPGNYTLDRNLGISLSYEVSSFAIGAVYDEYQGSTLATAERKDRRMLVGASYAFGPAKAF
IGYRWYNGNVGAMPTDRSDLYWAGLRYSVTPALKLTGAAYYTNMRNAGADPIMFVASADYAFSKRTDVYMNAGYALNRGN
SQLGMNGFNTPSGSPTNVVPGKDQTGLVVGVRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37810; Mature: 37810

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRHGVAMATLGMIAGTASAQSSVTLYGVADVGIEYLSNVPSANGGASQVRMASGNMST
CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
SRWGIRGVEDLGGGLKAIFDLESGISLDTGAQNNRTRLFDRTSIVGLSSKYGTVTLGRQT
CCCCCCCHHHHCCCEEEEEECCCCCEECCCCCCCCEEEEECEEEEEECCCCCEEEECCCC
TPLYDTAIQLDPMGFAPRYSLYKSDDVLAGRADNSIKYRGTFNGLTASGLYSFSRTGGGE
CCCEEEEEEECCCCCCCCCCEECCCCEEEECCCCCEEEEEECCCCCHHCEEEECCCCCCC
VPGNYTLDRNLGISLSYEVSSFAIGAVYDEYQGSTLATAERKDRRMLVGASYAFGPAKAF
CCCCEEEECCCCEEEEEECCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCEEE
IGYRWYNGNVGAMPTDRSDLYWAGLRYSVTPALKLTGAAYYTNMRNAGADPIMFVASADY
EEEEEECCCCCCCCCCCCCEEEECEEEEECCEEEECCEEEEECCCCCCCCCEEEEEECCC
AFSKRTDVYMNAGYALNRGNSQLGMNGFNTPSGSPTNVVPGKDQTGLVVGVRHKF
CCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MNVRHGVAMATLGMIAGTASAQSSVTLYGVADVGIEYLSNVPSANGGASQVRMASGNMST
CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
SRWGIRGVEDLGGGLKAIFDLESGISLDTGAQNNRTRLFDRTSIVGLSSKYGTVTLGRQT
CCCCCCCHHHHCCCEEEEEECCCCCEECCCCCCCCEEEEECEEEEEECCCCCEEEECCCC
TPLYDTAIQLDPMGFAPRYSLYKSDDVLAGRADNSIKYRGTFNGLTASGLYSFSRTGGGE
CCCEEEEEEECCCCCCCCCCEECCCCEEEECCCCCEEEEEECCCCCHHCEEEECCCCCCC
VPGNYTLDRNLGISLSYEVSSFAIGAVYDEYQGSTLATAERKDRRMLVGASYAFGPAKAF
CCCCEEEECCCCEEEEEECCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCEEE
IGYRWYNGNVGAMPTDRSDLYWAGLRYSVTPALKLTGAAYYTNMRNAGADPIMFVASADY
EEEEEECCCCCCCCCCCCCEEEECEEEEECCEEEECCEEEEECCCCCCCCCEEEEEECCC
AFSKRTDVYMNAGYALNRGNSQLGMNGFNTPSGSPTNVVPGKDQTGLVVGVRHKF
CCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]