| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94313974
Identifier: 94313974
GI number: 94313974
Start: 1741825
End: 1742883
Strand: Direct
Name: 94313974
Synonym: Rmet_5052
Alternate gene names: NA
Gene position: 1741825-1742883 (Clockwise)
Preceding gene: 94313965
Following gene: 94313978
Centisome position: 67.51
GC content: 66.67
Gene sequence:
>1059_bases ATGCCGGAGATCGTCAATTTGCCTCGACGGGGCTTTATGGGAGTTGTGGCGGCGACGCTGGCCGCGGCGCAATTCGGGGG GGCGCAGACGGCCCGGGCCCAGACCAGCCAGTCGAAGGCAACGCCACTGCCCCAGCCACTGCCCCGGCCGGGCACTCATA CGAGCTTTGCGCCGATCAAGCAGATCAAAGCCGGCGTGTTGAACGTCGGCTATGCGGAGGCTGGCCCGACCAACGGGCCC GTCGCGCTGTTGCTGCATGGCTGGCCGTACGACATCTACAGCTTCGTCGACGTGGCACCGCTACTGGCGGCACGGGGCTA TCGCGTGATCATGCCCTACCTGCGCGGCTACGGCACCACCAGCTTTCTGTCCTCCGACACCATGCGAAATGGTCAGCCCT CGGCGATTGCCGCCGACATGATCGCGCTGCTGGATGCGCTCGGCATCCAGAACGCCGTGGTGGCCGGCTTCGACTGGGGC GCGCGCACCGCCGACATCATGGCCGCGCTGTGGCCAGACCGCTGCCGGGGACTGGTATCGGTCAGCGGCTACCTGATCGG CAGCCAGGCCGGCGGCAAGGTGCCCCTGCCGCCCGAGGCCGAGCTTCAGTGGTGGTACCAGTTCTACTTCGCCACGGACC GTGGCCGCGCCGGCTATCAGAAGTACACCCACCAGTTCGCCAAGCTCATCTGGAAACTGGCATCACCGAAGTGGGATTTC GATGACGCCACGTTCGAACGCAGCGCCGCCGCGTTCGACAACCCCGACCATGTCGACATCACGGTGCACAACTATCGCTG GCGGCAAGGGCTGGCCACCGGAGAAGCCCGGTTCGACGATATCGAGAAACGGCTCGCCACCGCGCCCACCATCAGCGTGC CCACCATCACCATGGAAGGCGACGCCAACGGTGCGCCGCATCCCGAGCCAAGCGCCTATGCCAGCAAGTTCACGGGACGG TACGAACACCGCAACGTGACCGGCGGGATCGGCCATAACCTGCCGCAGGAAGCGCCCGCCGCGTTCGCGCAGGCGGTGCT CGACGTGGACCGGCGCTAA
Upstream 100 bases:
>100_bases ATATACATTGCGATACAAATCCCCCCGCGCGCCGCTACATGCCGGTTACTTGCGCCACGTAGAGTCATGCACAGGTTGAT CACACACACAGGAGCAGGAG
Downstream 100 bases:
>100_bases GGCACGGTGCCTTCACGGTGCAGGCGATGGGCAGGCGTCATGGCCGCCCATCCCCAATGCCACCTACCTCACCAGGGCTC GAGACGCCAACCTTGGCCGG
Product: putative epoxide hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Epoxide Hydrolase Protein; Epoxide Hydrolase; Alpha/Beta Hydrolase; Alpha/Beta Family Hydrolase; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Fold Family Hydrolase; Hydrolase; Hydrolase Alpha/Beta Fold; Hydrolase Alpha/Beta Fold Family; Dehalogenase/Hydrolase; S33 Family Peptidase; Alpha/Beta Hydrolase Superfamily Protein; Epoxide Hydrolase EphB; Alpha/Beta Hydrolase Superfamily Hydrolase/Acyltransferase; Hydrolase Or Acyltransferase
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MPEIVNLPRRGFMGVVAATLAAAQFGGAQTARAQTSQSKATPLPQPLPRPGTHTSFAPIKQIKAGVLNVGYAEAGPTNGP VALLLHGWPYDIYSFVDVAPLLAARGYRVIMPYLRGYGTTSFLSSDTMRNGQPSAIAADMIALLDALGIQNAVVAGFDWG ARTADIMAALWPDRCRGLVSVSGYLIGSQAGGKVPLPPEAELQWWYQFYFATDRGRAGYQKYTHQFAKLIWKLASPKWDF DDATFERSAAAFDNPDHVDITVHNYRWRQGLATGEARFDDIEKRLATAPTISVPTITMEGDANGAPHPEPSAYASKFTGR YEHRNVTGGIGHNLPQEAPAAFAQAVLDVDRR
Sequences:
>Translated_352_residues MPEIVNLPRRGFMGVVAATLAAAQFGGAQTARAQTSQSKATPLPQPLPRPGTHTSFAPIKQIKAGVLNVGYAEAGPTNGP VALLLHGWPYDIYSFVDVAPLLAARGYRVIMPYLRGYGTTSFLSSDTMRNGQPSAIAADMIALLDALGIQNAVVAGFDWG ARTADIMAALWPDRCRGLVSVSGYLIGSQAGGKVPLPPEAELQWWYQFYFATDRGRAGYQKYTHQFAKLIWKLASPKWDF DDATFERSAAAFDNPDHVDITVHNYRWRQGLATGEARFDDIEKRLATAPTISVPTITMEGDANGAPHPEPSAYASKFTGR YEHRNVTGGIGHNLPQEAPAAFAQAVLDVDRR >Mature_351_residues PEIVNLPRRGFMGVVAATLAAAQFGGAQTARAQTSQSKATPLPQPLPRPGTHTSFAPIKQIKAGVLNVGYAEAGPTNGPV ALLLHGWPYDIYSFVDVAPLLAARGYRVIMPYLRGYGTTSFLSSDTMRNGQPSAIAADMIALLDALGIQNAVVAGFDWGA RTADIMAALWPDRCRGLVSVSGYLIGSQAGGKVPLPPEAELQWWYQFYFATDRGRAGYQKYTHQFAKLIWKLASPKWDFD DATFERSAAAFDNPDHVDITVHNYRWRQGLATGEARFDDIEKRLATAPTISVPTITMEGDANGAPHPEPSAYASKFTGRY EHRNVTGGIGHNLPQEAPAAFAQAVLDVDRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27597073, Length=210, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38176; Mature: 38044
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIVNLPRRGFMGVVAATLAAAQFGGAQTARAQTSQSKATPLPQPLPRPGTHTSFAPIK CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH QIKAGVLNVGYAEAGPTNGPVALLLHGWPYDIYSFVDVAPLLAARGYRVIMPYLRGYGTT HHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCH SFLSSDTMRNGQPSAIAADMIALLDALGIQNAVVAGFDWGARTADIMAALWPDRCRGLVS HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCHHHCCCEEE VSGYLIGSQAGGKVPLPPEAELQWWYQFYFATDRGRAGYQKYTHQFAKLIWKLASPKWDF ECEEEEECCCCCCCCCCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCC DDATFERSAAAFDNPDHVDITVHNYRWRQGLATGEARFDDIEKRLATAPTISVPTITMEG CCHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHCCCCEECCEEEECC DANGAPHPEPSAYASKFTGRYEHRNVTGGIGHNLPQEAPAAFAQAVLDVDRR CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PEIVNLPRRGFMGVVAATLAAAQFGGAQTARAQTSQSKATPLPQPLPRPGTHTSFAPIK CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH QIKAGVLNVGYAEAGPTNGPVALLLHGWPYDIYSFVDVAPLLAARGYRVIMPYLRGYGTT HHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCH SFLSSDTMRNGQPSAIAADMIALLDALGIQNAVVAGFDWGARTADIMAALWPDRCRGLVS HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCHHHCCCEEE VSGYLIGSQAGGKVPLPPEAELQWWYQFYFATDRGRAGYQKYTHQFAKLIWKLASPKWDF ECEEEEECCCCCCCCCCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCC DDATFERSAAAFDNPDHVDITVHNYRWRQGLATGEARFDDIEKRLATAPTISVPTITMEG CCHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHCCCCEECCEEEECC DANGAPHPEPSAYASKFTGRYEHRNVTGGIGHNLPQEAPAAFAQAVLDVDRR CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA