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The map label for this gene is ntaR [H]

Identifier: 94313962

GI number: 94313962

Start: 1727131

End: 1727862

Strand: Direct

Name: ntaR [H]

Synonym: Rmet_5040

Alternate gene names: 94313962

Gene position: 1727131-1727862 (Clockwise)

Preceding gene: 94313956

Following gene: 94313965

Centisome position: 66.94

GC content: 63.8

Gene sequence:

>732_bases
ATGATCCGTGCGATTCAAGAATCCCATCGGGCAGAAACAAGCATGAATTCGCCTATTTCCACGACTCGGCGCAAGCGCGG
TTCCGACGTGTTCCAGACGCTGCGCGACATGGCCATCTCCTACGCACTGAAACCGGGCGAGCGTCTCAACGAAATCGAAC
TGGCGGAGCAACTCGGCGTGAGCCGCACGCCGGTGCGTGAGGCACTGGCGCGGCTGGCCACGCATGGCTTCCTGGAGGAG
TCGAGCCGTGGCTACGTCCGCCGGCCGCTCGACATCCGCGAGATGCAGGACCTGTATGAGGCGCGCGTCGCCGTCGAACG
CGAATGCCTGCGGCTTGCGTTCGAGCGTGCGTCAGCGGAGGGAATCGAGGAATTGGCCCGATACCTGGAGCACAGCCGTT
CGGTCTCGCCCGATACGCCGGCACAGCAACTCGTTGAACTGGACGAGGGCTTTCATTTGCGTATCGCGGAGTTGTCCGGC
AATGCGGAGTTGCGCCGGATGCTGGCCAGCCTGAACGAGCGCATTCGCTTCATCCGCTGGATCGACATGGAGAACGTGGG
GCGCGACTCCACCCAGAGCGAGCACGCCGAAATCGTGGACGCGTTGAAGGCGCGCGACTGGCAACGCGCGGAGGCCCGTC
TGACCTCGCATATCGCGCTACGCCGCGAGCAGATCGTCGACGCCATCAAGAAGGGCCTGGCGCGCGTCTATCTGGAGGGT
GAAGCGGACTGA

Upstream 100 bases:

>100_bases
CTCGAAAGAATACTTTTAAGTATACTTAATCGTATGCAAGAATCCGGACAGCAATTGCCGATGCCGGGTGCAGACAAGGG
CATCTGGTAGCGCGCGCGGT

Downstream 100 bases:

>100_bases
AGCCGATTGATGCGGATTGATGCGGATTGATGCGGATTGATGCGGGCCTCGCCGGTGGCCCATACATCCGGCGGTCAATC
AGGCCGTTCGCATACTCAAG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MIRAIQESHRAETSMNSPISTTRRKRGSDVFQTLRDMAISYALKPGERLNEIELAEQLGVSRTPVREALARLATHGFLEE
SSRGYVRRPLDIREMQDLYEARVAVERECLRLAFERASAEGIEELARYLEHSRSVSPDTPAQQLVELDEGFHLRIAELSG
NAELRRMLASLNERIRFIRWIDMENVGRDSTQSEHAEIVDALKARDWQRAEARLTSHIALRREQIVDAIKKGLARVYLEG
EAD

Sequences:

>Translated_243_residues
MIRAIQESHRAETSMNSPISTTRRKRGSDVFQTLRDMAISYALKPGERLNEIELAEQLGVSRTPVREALARLATHGFLEE
SSRGYVRRPLDIREMQDLYEARVAVERECLRLAFERASAEGIEELARYLEHSRSVSPDTPAQQLVELDEGFHLRIAELSG
NAELRRMLASLNERIRFIRWIDMENVGRDSTQSEHAEIVDALKARDWQRAEARLTSHIALRREQIVDAIKKGLARVYLEG
EAD
>Mature_243_residues
MIRAIQESHRAETSMNSPISTTRRKRGSDVFQTLRDMAISYALKPGERLNEIELAEQLGVSRTPVREALARLATHGFLEE
SSRGYVRRPLDIREMQDLYEARVAVERECLRLAFERASAEGIEELARYLEHSRSVSPDTPAQQLVELDEGFHLRIAELSG
NAELRRMLASLNERIRFIRWIDMENVGRDSTQSEHAEIVDALKARDWQRAEARLTSHIALRREQIVDAIKKGLARVYLEG
EAD

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27865; Mature: 27865

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRAIQESHRAETSMNSPISTTRRKRGSDVFQTLRDMAISYALKPGERLNEIELAEQLGV
CCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
SRTPVREALARLATHGFLEESSRGYVRRPLDIREMQDLYEARVAVERECLRLAFERASAE
CCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIEELARYLEHSRSVSPDTPAQQLVELDEGFHLRIAELSGNAELRRMLASLNERIRFIRW
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
IDMENVGRDSTQSEHAEIVDALKARDWQRAEARLTSHIALRREQIVDAIKKGLARVYLEG
CCHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EAD
CCC
>Mature Secondary Structure
MIRAIQESHRAETSMNSPISTTRRKRGSDVFQTLRDMAISYALKPGERLNEIELAEQLGV
CCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
SRTPVREALARLATHGFLEESSRGYVRRPLDIREMQDLYEARVAVERECLRLAFERASAE
CCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIEELARYLEHSRSVSPDTPAQQLVELDEGFHLRIAELSGNAELRRMLASLNERIRFIRW
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
IDMENVGRDSTQSEHAEIVDALKARDWQRAEARLTSHIALRREQIVDAIKKGLARVYLEG
CCHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EAD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA