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The map label for this gene is tniA

Identifier: 94313894

GI number: 94313894

Start: 1648938

End: 1650626

Strand: Direct

Name: tniA

Synonym: Rmet_4972

Alternate gene names: NA

Gene position: 1648938-1650626 (Clockwise)

Preceding gene: 291481550

Following gene: 94313895

Centisome position: 63.91

GC content: 64.77

Gene sequence:

>1689_bases
ATGAGCATGGCGACCGATACCGCACCGATTACCGAGCACGGCGTGGCCACCCTGCCAGAACAGGCATGGGAGCGTGCGCG
TCGTCGCGCGGAGATCATTGGGCCGTTGGCGCAGTCGGAGACGGTTGGGCATGAAGCGGCCGACGCGGCAGCCCAGGCAT
TGGGGCTGTCCCGGCGGCAGGTCTACGTCCTGATCCGCCGTGCCCGGCTAGGATCGGGGCTGGTCACTGACTTGGCTCTT
GGGCAGTCGAGCGGTGGCAAAGGTAAAGGCCGCTTGCCGGAGTCGGTCGAACGAATCATCCGCGAGTTACTGCAAAAGCG
CTTCCTGACCAAGCAGAAGCGTAGCTTGGCGGCGTTCCACCGCGAAGTTGTGCGGGCGTGCAAGCTGCAAAAGCTGCGGG
TGCCGGCGCGCAACACGGTGGCTCTGCGGATCGCCGGCCTCGATCCGCGCGAGGTCACTCACCGCCGGGAAGGACAAGAT
GCCGCCCGCGACCTGCAAGGTGTTGGTGGTGTTCCGCCACCCGTCTCCGCGCCGCTGGAGCAGGTGCAGATCGACCACAC
AGTCATCGACCTGATCGTGGTGGACGAGCGCGACCGGCAACCGATTGGCCGTCCATACCTGACCCTCGCCATCGACGTAT
TCACCCGCTGCGTGGTTGGCATGGTCGTTACGCTGGAAGCCCCGTCCGCCGTCTCGGTCGGCTTGTGCTTGGTGCATGCC
GCCTGCGACAAGCGCCCTTGGTTGGAAGGGTTGAACGTAGAGATGGATTGGCCGATGAGCGGCAAGCCCAGACTGCTCTA
CTTGGACAACGCGGCTGAGTTCAAGAGCGAGGCGCTGCGCCGTGGCTGCGAGCAGCATGGCATCCGGTTGGACTATCGCC
CGCTTGGGCAGCCGCACTACGGCGGTATCGTGGAACGGATCATCGGCACGGCGATGCAGATGATCCACGACGAATTGCCG
GGGACGACCTTCTCCAATCCTGACCAGCGCGGGGAATACGCCTCCGAGAAGATGGCCGCCCTGACACTGCGCGAGCTGGA
GCGCTGGCTCACATTGGCGGTCGGCACCTATCACGGCTCCGTGCACAACGGCCTGCTCCAACCGCCGGCCGCGCGCTGGG
CCGAAGCTATCACGCGGACCGGCGTGCCAACCGTCATCACTCGCGCTACGGCTTTTCTGGTCGATTTTCTGCCCATCATC
CGCCGCACGCTGACCCGCACCGGCTTCGTCATCGACCACATCCACTACTACGCCGATGCGCTCAAGCCGTGGATAGCTCG
GCGGGACCGCTTGCCTGCGTTCCTGATCCGGCGCGACCCGCGCGACATCAGCCGCATATGGGTGCTGGAACCAGAGGGGC
AGCACTACCTGGAAATTCCCTACCGTACCTTGTCGCACCCGGCTGTCACCCTCTGGGAACAACGACAGGCGCTGGCGAAA
TTGCGGCAGCAAGGGCGCGAACAGGTGGATGAGTCGGCGTTGTTCCGCATGATCGGCCAGATGCGCGAAATCGTTACCAC
CGCGCAGAAGGCTACGCGCAAGGCGCGGCGCGACGCGGATCGACGCCAGCATCTCAAGGCAACGGCAACGCCTGTCAAAA
CCACGCCACCACCGGGCGCTGACATGGATGGGCAGCAGGCAGACAACCAGCCGCCGGCCAAACCGTTCGACCAGATTGAG
GAGTGGTAG

Upstream 100 bases:

>100_bases
GGTTTGAAGCCTCTTGTGCATACGGCTCCTGACAGCCAGATATCAGGACTCCTCTGCACGAAACTCGTCTATGCTCAATA
CTCGTGTGCACCAAAGCGAG

Downstream 100 bases:

>100_bases
CCGTGGAAGAATATCCCATCATCGACTTGTCCCACCTGCTGCCGGCGGCCCAGGGCTTGGCCCGTCTCCCGGCGGACGAA
CGCATCCATCGCCTTCGCGC

Product: transposase (Tn6048)

Products: NA

Alternate protein names: ORF 480 [H]

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSMATDTAPITEHGVATLPEQAWERARRRAEIIGPLAQSETVGHEAADAAAQALGLSRRQVYVLIRRARLGSGLVTDLAL
GQSSGGKGKGRLPESVERIIRELLQKRFLTKQKRSLAAFHREVVRACKLQKLRVPARNTVALRIAGLDPREVTHRREGQD
AARDLQGVGGVPPPVSAPLEQVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDVFTRCVVGMVVTLEAPSAVSVGLCLVHA
ACDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELP
GTTFSNPDQRGEYASEKMAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAITRTGVPTVITRATAFLVDFLPII
RRTLTRTGFVIDHIHYYADALKPWIARRDRLPAFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAK
LRQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATATPVKTTPPPGADMDGQQADNQPPAKPFDQIE
EW

Sequences:

>Translated_562_residues
MSMATDTAPITEHGVATLPEQAWERARRRAEIIGPLAQSETVGHEAADAAAQALGLSRRQVYVLIRRARLGSGLVTDLAL
GQSSGGKGKGRLPESVERIIRELLQKRFLTKQKRSLAAFHREVVRACKLQKLRVPARNTVALRIAGLDPREVTHRREGQD
AARDLQGVGGVPPPVSAPLEQVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDVFTRCVVGMVVTLEAPSAVSVGLCLVHA
ACDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELP
GTTFSNPDQRGEYASEKMAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAITRTGVPTVITRATAFLVDFLPII
RRTLTRTGFVIDHIHYYADALKPWIARRDRLPAFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAK
LRQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATATPVKTTPPPGADMDGQQADNQPPAKPFDQIE
EW
>Mature_561_residues
SMATDTAPITEHGVATLPEQAWERARRRAEIIGPLAQSETVGHEAADAAAQALGLSRRQVYVLIRRARLGSGLVTDLALG
QSSGGKGKGRLPESVERIIRELLQKRFLTKQKRSLAAFHREVVRACKLQKLRVPARNTVALRIAGLDPREVTHRREGQDA
ARDLQGVGGVPPPVSAPLEQVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDVFTRCVVGMVVTLEAPSAVSVGLCLVHAA
CDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPG
TTFSNPDQRGEYASEKMAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAITRTGVPTVITRATAFLVDFLPIIR
RTLTRTGFVIDHIHYYADALKPWIARRDRLPAFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAKL
RQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATATPVKTTPPPGADMDGQQADNQPPAKPFDQIEE
W

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR009004 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 62942; Mature: 62811

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMATDTAPITEHGVATLPEQAWERARRRAEIIGPLAQSETVGHEAADAAAQALGLSRRQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCHHH
VYVLIRRARLGSGLVTDLALGQSSGGKGKGRLPESVERIIRELLQKRFLTKQKRSLAAFH
HHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REVVRACKLQKLRVPARNTVALRIAGLDPREVTHRREGQDAARDLQGVGGVPPPVSAPLE
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHH
QVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDVFTRCVVGMVVTLEAPSAVSVGLCLVHA
HHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH
ACDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHY
HHCCCCCCCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEECCCCCCCCH
GGIVERIIGTAMQMIHDELPGTTFSNPDQRGEYASEKMAALTLRELERWLTLAVGTYHGS
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VHNGLLQPPAARWAEAITRTGVPTVITRATAFLVDFLPIIRRTLTRTGFVIDHIHYYADA
HHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LKPWIARRDRLPAFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAK
HHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEECCHHHHCCCHHHHHHHHHHHHH
LRQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATATPVKTTPPPGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DMDGQQADNQPPAKPFDQIEEW
CCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
SMATDTAPITEHGVATLPEQAWERARRRAEIIGPLAQSETVGHEAADAAAQALGLSRRQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCHHH
VYVLIRRARLGSGLVTDLALGQSSGGKGKGRLPESVERIIRELLQKRFLTKQKRSLAAFH
HHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REVVRACKLQKLRVPARNTVALRIAGLDPREVTHRREGQDAARDLQGVGGVPPPVSAPLE
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHH
QVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDVFTRCVVGMVVTLEAPSAVSVGLCLVHA
HHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH
ACDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHY
HHCCCCCCCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEECCCCCCCCH
GGIVERIIGTAMQMIHDELPGTTFSNPDQRGEYASEKMAALTLRELERWLTLAVGTYHGS
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VHNGLLQPPAARWAEAITRTGVPTVITRATAFLVDFLPIIRRTLTRTGFVIDHIHYYADA
HHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LKPWIARRDRLPAFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAK
HHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEECCHHHHCCCHHHHHHHHHHHHH
LRQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATATPVKTTPPPGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DMDGQQADNQPPAKPFDQIEEW
CCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170815 [H]