BacMap

Definition	Cupriavidus metallidurans CH34 megaplasmid, complete sequence.
Accession	NC_007974
Length	2,580,084

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The map label for this gene is gabD [H]

Identifier: 94313864

GI number: 94313864

Start: 1607058

End: 1608506

Strand: Direct

Name: gabD [H]

Synonym: Rmet_4942

Alternate gene names: 94313864

Gene position: 1607058-1608506 (Clockwise)

Preceding gene: 94313859

Following gene: 94313865

Centisome position: 62.29

GC content: 66.39

Gene sequence:

>1449_bases
ATGCAACTCAAGGACCCTTCGCTGTTCAAGCAACTGGCCTATGTCGACGGTCAATGGATCAGCGCCGATTCGGGCGCCAC
GTTCGACGTCACGGACCCGGCCACTGGCGAGGTCATCGCCCGGGTGGCCGACCTGGGTGCTGCCGAGACCACGCGCGCCG
TTGCTGCCGCGGAAGTCGCCCAGAAAGCCTGGGCGGCAAAGACCGGCAAGGAGCGCGCCAATATCCTGCGCCGCTGGTTC
GACCTGATGTTGGCCAATACCGACGACCTGGCCTACCTGATGACGCGCGAGCAAGGCAAGCCGCTGGCCGAGGCCAAGGG
CGAGATCGCCTACGCCGCCAGCTTCATCGAGTGGTTCGCCGAGGAAGCCAAGCGCGTGGACGGTGAAGTGCTGGCCACGC
CTGCCGCCGACAAGCGGCTGGTCACGCTGCGCCAGCCGGTAGGTGTGTGCGCCGCGATCACCCCGTGGAACTTCCCGGCC
GCGATGATTACGCGCAAGGTGGCGCCGGCGCTGGCCGCTGGCTGCGCGATCGTGATCAAGCCGGCCGAACTGACGCCGCT
GTCCGCATTCGCGCTGGCCGAACTCGCGCATCGCGCCGGCGTGCCGGCAGGCGTGCTGCAAGTTGTCACCGGTGACGCCC
GGAACATTGGTGGCGTGCTGACGGCCAGCCCGATCGTGCGCAAGCTGTCGTTCACGGGCTCGACGGAAGTGGGCCGCATC
CTGATGGCTCAGTCGGCGCCGACCATCAAGCGCCTGTCGCTCGAACTCGGTGGCAATGCGCCGTTCATCGTCTTTGACGA
TGCCGACGTCGATGCGGCCGTGGAAGGCGCGATCGTCGCCAAGTACCGCAACGGCGGCCAGACCTGCGTGTGCGCGAACC
GCTTCTACATCCAGGACGGCATTTACGATGCGTTCGCCGCTAAGTTTGCCGAGCGCACCGCTCAGCTGCGTGTCGGCAAC
GGGCTCGAGGCAGGCGTGGTGATCGGCCCGCTGATCGAGGACGCCGCGATCGAGAAGGTGAATTCGCTGGTCGAGGATGC
CACGTCAAAGGGCGGCAAGGTACTGGCCGGTGGCGGCAAGCACCCGCTCGGCGGAACGTATTACACGCCGACCGTGATCG
GCAATGCCACCGCCGACATGCGCATGGCGCGCGAAGAAATCTTCGGGCCGGTGGCACCGCTGTTCCGCTTCAAGCAGGAC
GACGAAGCCGTTGCCGCCGCCAACGCCACCGAGTATGGCCTGGCCGCCTATCTCTACACCCGCGACATCTCGCGCGCATG
GCGCACCGCCGAGGCGCTGGAGTACGGCATGGTCGGCCTGAACACGGGCCTGATCTCCAACGAGGTGGCACCGTTCGGCG
GCATCAAGCAATCCGGCGTCGGCCGCGAAGGCTCGCGCCACGGCATCGAGGAATACCTCGAGATCAAGTATCTTTGCCTG
CAGATGTGA

Upstream 100 bases:

>100_bases
GGCGTAAGATATTCCATCGTTCCGCATATCGAATATCGTTCAATCTATTGAACGATATTAAACGCCGCAAACCCGACGAA
TGCAACCCGAGGATTTCGCC

Downstream 100 bases:

>100_bases
TTGAGCCCCCCTCTCCCGCTCACTAACAGGGGAGAGGGAAGACAACCCAGAAAACCACACACCGGAGACCCCATGAACCC
GTTCCGTTTCCAGACCGTGC

Product: succinate-semialdehyde dehydrogenase I, NADP-dependent

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MQLKDPSLFKQLAYVDGQWISADSGATFDVTDPATGEVIARVADLGAAETTRAVAAAEVAQKAWAAKTGKERANILRRWF
DLMLANTDDLAYLMTREQGKPLAEAKGEIAYAASFIEWFAEEAKRVDGEVLATPAADKRLVTLRQPVGVCAAITPWNFPA
AMITRKVAPALAAGCAIVIKPAELTPLSAFALAELAHRAGVPAGVLQVVTGDARNIGGVLTASPIVRKLSFTGSTEVGRI
LMAQSAPTIKRLSLELGGNAPFIVFDDADVDAAVEGAIVAKYRNGGQTCVCANRFYIQDGIYDAFAAKFAERTAQLRVGN
GLEAGVVIGPLIEDAAIEKVNSLVEDATSKGGKVLAGGGKHPLGGTYYTPTVIGNATADMRMAREEIFGPVAPLFRFKQD
DEAVAAANATEYGLAAYLYTRDISRAWRTAEALEYGMVGLNTGLISNEVAPFGGIKQSGVGREGSRHGIEEYLEIKYLCL
QM

Sequences:

>Translated_482_residues
MQLKDPSLFKQLAYVDGQWISADSGATFDVTDPATGEVIARVADLGAAETTRAVAAAEVAQKAWAAKTGKERANILRRWF
DLMLANTDDLAYLMTREQGKPLAEAKGEIAYAASFIEWFAEEAKRVDGEVLATPAADKRLVTLRQPVGVCAAITPWNFPA
AMITRKVAPALAAGCAIVIKPAELTPLSAFALAELAHRAGVPAGVLQVVTGDARNIGGVLTASPIVRKLSFTGSTEVGRI
LMAQSAPTIKRLSLELGGNAPFIVFDDADVDAAVEGAIVAKYRNGGQTCVCANRFYIQDGIYDAFAAKFAERTAQLRVGN
GLEAGVVIGPLIEDAAIEKVNSLVEDATSKGGKVLAGGGKHPLGGTYYTPTVIGNATADMRMAREEIFGPVAPLFRFKQD
DEAVAAANATEYGLAAYLYTRDISRAWRTAEALEYGMVGLNTGLISNEVAPFGGIKQSGVGREGSRHGIEEYLEIKYLCL
QM
>Mature_482_residues
MQLKDPSLFKQLAYVDGQWISADSGATFDVTDPATGEVIARVADLGAAETTRAVAAAEVAQKAWAAKTGKERANILRRWF
DLMLANTDDLAYLMTREQGKPLAEAKGEIAYAASFIEWFAEEAKRVDGEVLATPAADKRLVTLRQPVGVCAAITPWNFPA
AMITRKVAPALAAGCAIVIKPAELTPLSAFALAELAHRAGVPAGVLQVVTGDARNIGGVLTASPIVRKLSFTGSTEVGRI
LMAQSAPTIKRLSLELGGNAPFIVFDDADVDAAVEGAIVAKYRNGGQTCVCANRFYIQDGIYDAFAAKFAERTAQLRVGN
GLEAGVVIGPLIEDAAIEKVNSLVEDATSKGGKVLAGGGKHPLGGTYYTPTVIGNATADMRMAREEIFGPVAPLFRFKQD
DEAVAAANATEYGLAAYLYTRDISRAWRTAEALEYGMVGLNTGLISNEVAPFGGIKQSGVGREGSRHGIEEYLEIKYLCL
QM

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=477, Percent_Identity=54.2976939203354, Blast_Score=517, Evalue=1e-147,
Organism=Homo sapiens, GI25777721, Length=490, Percent_Identity=52.6530612244898, Blast_Score=506, Evalue=1e-143,
Organism=Homo sapiens, GI25777730, Length=484, Percent_Identity=38.8429752066116, Blast_Score=323, Evalue=2e-88,
Organism=Homo sapiens, GI153266822, Length=476, Percent_Identity=36.7647058823529, Blast_Score=316, Evalue=4e-86,
Organism=Homo sapiens, GI12007648, Length=476, Percent_Identity=35.9243697478992, Blast_Score=313, Evalue=2e-85,
Organism=Homo sapiens, GI115387104, Length=467, Percent_Identity=38.7580299785867, Blast_Score=312, Evalue=6e-85,
Organism=Homo sapiens, GI25777724, Length=474, Percent_Identity=35.8649789029536, Blast_Score=308, Evalue=6e-84,
Organism=Homo sapiens, GI21361176, Length=474, Percent_Identity=36.0759493670886, Blast_Score=307, Evalue=1e-83,
Organism=Homo sapiens, GI25777732, Length=489, Percent_Identity=35.7873210633947, Blast_Score=304, Evalue=1e-82,
Organism=Homo sapiens, GI238814322, Length=478, Percent_Identity=34.5188284518828, Blast_Score=300, Evalue=2e-81,
Organism=Homo sapiens, GI21614513, Length=477, Percent_Identity=34.3815513626834, Blast_Score=297, Evalue=2e-80,
Organism=Homo sapiens, GI25777728, Length=414, Percent_Identity=36.7149758454106, Blast_Score=276, Evalue=2e-74,
Organism=Homo sapiens, GI25777726, Length=474, Percent_Identity=33.1223628691983, Blast_Score=266, Evalue=4e-71,
Organism=Homo sapiens, GI25952152, Length=469, Percent_Identity=32.1961620469083, Blast_Score=245, Evalue=6e-65,
Organism=Homo sapiens, GI11095441, Length=475, Percent_Identity=28.8421052631579, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI301500698, Length=479, Percent_Identity=30.2713987473904, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI188035924, Length=465, Percent_Identity=30.5376344086021, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI310128103, Length=465, Percent_Identity=30.5376344086021, Blast_Score=208, Evalue=7e-54,
Organism=Homo sapiens, GI310128093, Length=464, Percent_Identity=30.3879310344828, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI310128091, Length=464, Percent_Identity=29.7413793103448, Blast_Score=188, Evalue=8e-48,
Organism=Homo sapiens, GI223972651, Length=463, Percent_Identity=30.8855291576674, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI310128089, Length=322, Percent_Identity=31.6770186335404, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI310128097, Length=250, Percent_Identity=34.4, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI310128087, Length=465, Percent_Identity=26.8817204301075, Blast_Score=142, Evalue=8e-34,
Organism=Homo sapiens, GI238859541, Length=468, Percent_Identity=26.7094017094017, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI25777736, Length=468, Percent_Identity=26.7094017094017, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI25777734, Length=468, Percent_Identity=26.7094017094017, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI73466520, Length=336, Percent_Identity=28.2738095238095, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI4557303, Length=336, Percent_Identity=28.2738095238095, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI310128095, Length=309, Percent_Identity=30.0970873786408, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI206597441, Length=376, Percent_Identity=27.3936170212766, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI206597439, Length=376, Percent_Identity=27.3936170212766, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI22907049, Length=376, Percent_Identity=27.3936170212766, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI223972653, Length=463, Percent_Identity=27.2138228941685, Blast_Score=129, Evalue=9e-30,
Organism=Homo sapiens, GI73695881, Length=331, Percent_Identity=27.4924471299094, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI73695879, Length=331, Percent_Identity=27.4924471299094, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI4502043, Length=331, Percent_Identity=27.190332326284, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI238814371, Length=331, Percent_Identity=27.190332326284, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI71773324, Length=331, Percent_Identity=27.190332326284, Blast_Score=123, Evalue=5e-28,
Organism=Homo sapiens, GI310128099, Length=228, Percent_Identity=28.9473684210526, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI310128101, Length=228, Percent_Identity=28.9473684210526, Blast_Score=83, Evalue=7e-16,
Organism=Escherichia coli, GI1789015, Length=482, Percent_Identity=61.6182572614108, Blast_Score=634, Evalue=0.0,
Organism=Escherichia coli, GI1787684, Length=469, Percent_Identity=36.8869936034115, Blast_Score=322, Evalue=4e-89,
Organism=Escherichia coli, GI87081896, Length=476, Percent_Identity=38.4453781512605, Blast_Score=321, Evalue=7e-89,
Organism=Escherichia coli, GI1787715, Length=469, Percent_Identity=38.3795309168444, Blast_Score=307, Evalue=9e-85,
Organism=Escherichia coli, GI1786504, Length=480, Percent_Identity=37.7083333333333, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI1787558, Length=474, Percent_Identity=35.6540084388186, Blast_Score=291, Evalue=6e-80,
Organism=Escherichia coli, GI87082295, Length=478, Percent_Identity=33.8912133891213, Blast_Score=261, Evalue=7e-71,
Organism=Escherichia coli, GI87081926, Length=447, Percent_Identity=34.2281879194631, Blast_Score=251, Evalue=7e-68,
Organism=Escherichia coli, GI1788042, Length=453, Percent_Identity=33.7748344370861, Blast_Score=203, Evalue=2e-53,
Organism=Escherichia coli, GI1787250, Length=462, Percent_Identity=30.5194805194805, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1787653, Length=318, Percent_Identity=25.1572327044025, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17534119, Length=467, Percent_Identity=46.6809421841542, Blast_Score=421, Evalue=1e-118,
Organism=Caenorhabditis elegans, GI133930964, Length=490, Percent_Identity=37.9591836734694, Blast_Score=316, Evalue=1e-86,
Organism=Caenorhabditis elegans, GI17562198, Length=485, Percent_Identity=35.8762886597938, Blast_Score=304, Evalue=6e-83,
Organism=Caenorhabditis elegans, GI25144435, Length=474, Percent_Identity=36.0759493670886, Blast_Score=302, Evalue=2e-82,
Organism=Caenorhabditis elegans, GI25143876, Length=468, Percent_Identity=35.6837606837607, Blast_Score=285, Evalue=3e-77,
Organism=Caenorhabditis elegans, GI25143874, Length=468, Percent_Identity=35.6837606837607, Blast_Score=285, Evalue=4e-77,
Organism=Caenorhabditis elegans, GI71995606, Length=481, Percent_Identity=36.3825363825364, Blast_Score=280, Evalue=9e-76,
Organism=Caenorhabditis elegans, GI32564736, Length=414, Percent_Identity=36.9565217391304, Blast_Score=274, Evalue=8e-74,
Organism=Caenorhabditis elegans, GI71995613, Length=418, Percent_Identity=36.8421052631579, Blast_Score=250, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI17551164, Length=468, Percent_Identity=33.1196581196581, Blast_Score=245, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI115534176, Length=481, Percent_Identity=29.3139293139293, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71986308, Length=432, Percent_Identity=28.4722222222222, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI25146391, Length=386, Percent_Identity=28.2383419689119, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI32566756, Length=386, Percent_Identity=28.2383419689119, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI25146394, Length=386, Percent_Identity=28.2383419689119, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17534447, Length=479, Percent_Identity=28.6012526096033, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17564084, Length=353, Percent_Identity=29.4617563739377, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI32564151, Length=433, Percent_Identity=28.4064665127021, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI115532534, Length=393, Percent_Identity=28.2442748091603, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71990744, Length=318, Percent_Identity=29.2452830188679, Blast_Score=94, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6319478, Length=481, Percent_Identity=48.6486486486487, Blast_Score=477, Evalue=1e-135,
Organism=Saccharomyces cerevisiae, GI6320917, Length=464, Percent_Identity=36.4224137931034, Blast_Score=325, Evalue=9e-90,
Organism=Saccharomyces cerevisiae, GI6325196, Length=473, Percent_Identity=34.46088794926, Blast_Score=307, Evalue=3e-84,
Organism=Saccharomyces cerevisiae, GI6324950, Length=465, Percent_Identity=33.9784946236559, Blast_Score=304, Evalue=2e-83,
Organism=Saccharomyces cerevisiae, GI6323822, Length=479, Percent_Identity=32.9853862212944, Blast_Score=274, Evalue=2e-74,
Organism=Saccharomyces cerevisiae, GI6323821, Length=480, Percent_Identity=33.3333333333333, Blast_Score=272, Evalue=9e-74,
Organism=Saccharomyces cerevisiae, GI6321828, Length=475, Percent_Identity=27.3684210526316, Blast_Score=177, Evalue=5e-45,
Organism=Saccharomyces cerevisiae, GI6321826, Length=492, Percent_Identity=25.8130081300813, Blast_Score=100, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6323757, Length=331, Percent_Identity=26.5861027190332, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281362580, Length=479, Percent_Identity=49.0605427974948, Blast_Score=498, Evalue=1e-141,
Organism=Drosophila melanogaster, GI62472918, Length=479, Percent_Identity=49.0605427974948, Blast_Score=498, Evalue=1e-141,
Organism=Drosophila melanogaster, GI62472926, Length=479, Percent_Identity=49.0605427974948, Blast_Score=498, Evalue=1e-141,
Organism=Drosophila melanogaster, GI62472936, Length=479, Percent_Identity=49.0605427974948, Blast_Score=498, Evalue=1e-141,
Organism=Drosophila melanogaster, GI21356737, Length=479, Percent_Identity=49.0605427974948, Blast_Score=498, Evalue=1e-141,
Organism=Drosophila melanogaster, GI24650465, Length=473, Percent_Identity=39.323467230444, Blast_Score=335, Evalue=4e-92,
Organism=Drosophila melanogaster, GI20129399, Length=483, Percent_Identity=37.6811594202899, Blast_Score=311, Evalue=6e-85,
Organism=Drosophila melanogaster, GI24585660, Length=477, Percent_Identity=34.1719077568134, Blast_Score=298, Evalue=5e-81,
Organism=Drosophila melanogaster, GI24638878, Length=471, Percent_Identity=27.6008492569002, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24638876, Length=471, Percent_Identity=27.6008492569002, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24666674, Length=468, Percent_Identity=28.8461538461538, Blast_Score=195, Evalue=7e-50,
Organism=Drosophila melanogaster, GI24668425, Length=442, Percent_Identity=26.6968325791855, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24668417, Length=442, Percent_Identity=26.6968325791855, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24668413, Length=442, Percent_Identity=26.6968325791855, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI281360299, Length=333, Percent_Identity=26.7267267267267, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI281360297, Length=333, Percent_Identity=26.7267267267267, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI281360295, Length=333, Percent_Identity=26.7267267267267, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24586250, Length=333, Percent_Identity=26.7267267267267, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI281360301, Length=337, Percent_Identity=27.0029673590504, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI45552499, Length=337, Percent_Identity=26.7062314540059, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI281360303, Length=337, Percent_Identity=26.7062314540059, Blast_Score=118, Evalue=9e-27,
Organism=Drosophila melanogaster, GI28571802, Length=400, Percent_Identity=25.75, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571800, Length=400, Percent_Identity=25.75, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571798, Length=400, Percent_Identity=25.75, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571796, Length=400, Percent_Identity=25.75, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571794, Length=400, Percent_Identity=25.75, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571806, Length=400, Percent_Identity=25.75, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28574525, Length=440, Percent_Identity=21.8181818181818, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281360293, Length=145, Percent_Identity=32.4137931034483, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 51137; Mature: 51137

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKDPSLFKQLAYVDGQWISADSGATFDVTDPATGEVIARVADLGAAETTRAVAAAEVA
CCCCCHHHHHHHHHHCCCEEECCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
QKAWAAKTGKERANILRRWFDLMLANTDDLAYLMTREQGKPLAEAKGEIAYAASFIEWFA
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHH
EEAKRVDGEVLATPAADKRLVTLRQPVGVCAAITPWNFPAAMITRKVAPALAAGCAIVIK
HHHHHCCCCEEECCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEE
PAELTPLSAFALAELAHRAGVPAGVLQVVTGDARNIGGVLTASPIVRKLSFTGSTEVGRI
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCCEE
LMAQSAPTIKRLSLELGGNAPFIVFDDADVDAAVEGAIVAKYRNGGQTCVCANRFYIQDG
EEECCCCCEEEEEEEECCCCCEEEEECCCCCCHHCCEEEEEEECCCCEEEEECEEEEECC
IYDAFAAKFAERTAQLRVGNGLEAGVVIGPLIEDAAIEKVNSLVEDATSKGGKVLAGGGK
HHHHHHHHHHHHHHHEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
HPLGGTYYTPTVIGNATADMRMAREEIFGPVAPLFRFKQDDEAVAAANATEYGLAAYLYT
CCCCCCEECCEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCHHHHEEHHHH
RDISRAWRTAEALEYGMVGLNTGLISNEVAPFGGIKQSGVGREGSRHGIEEYLEIKYLCL
HHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QM
CC
>Mature Secondary Structure
MQLKDPSLFKQLAYVDGQWISADSGATFDVTDPATGEVIARVADLGAAETTRAVAAAEVA
CCCCCHHHHHHHHHHCCCEEECCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
QKAWAAKTGKERANILRRWFDLMLANTDDLAYLMTREQGKPLAEAKGEIAYAASFIEWFA
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHH
EEAKRVDGEVLATPAADKRLVTLRQPVGVCAAITPWNFPAAMITRKVAPALAAGCAIVIK
HHHHHCCCCEEECCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEE
PAELTPLSAFALAELAHRAGVPAGVLQVVTGDARNIGGVLTASPIVRKLSFTGSTEVGRI
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCCEE
LMAQSAPTIKRLSLELGGNAPFIVFDDADVDAAVEGAIVAKYRNGGQTCVCANRFYIQDG
EEECCCCCEEEEEEEECCCCCEEEEECCCCCCHHCCEEEEEEECCCCEEEEECEEEEECC
IYDAFAAKFAERTAQLRVGNGLEAGVVIGPLIEDAAIEKVNSLVEDATSKGGKVLAGGGK
HHHHHHHHHHHHHHHEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
HPLGGTYYTPTVIGNATADMRMAREEIFGPVAPLFRFKQDDEAVAAANATEYGLAAYLYT
CCCCCCEECCEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCHHHHEEHHHH
RDISRAWRTAEALEYGMVGLNTGLISNEVAPFGGIKQSGVGREGSRHGIEEYLEIKYLCL
HHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QM
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]