| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94313844
Identifier: 94313844
GI number: 94313844
Start: 1585293
End: 1585580
Strand: Reverse
Name: 94313844
Synonym: Rmet_4922
Alternate gene names: NA
Gene position: 1585580-1585293 (Counterclockwise)
Preceding gene: 94313846
Following gene: 94313843
Centisome position: 61.45
GC content: 62.15
Gene sequence:
>288_bases ATGTCTCAGTCCACTTCCAACCCGCAACTCGACCTCCGCACGATCCCGCCGCGTGACCGCCATCCGCTGATTTTCTCGAC GTTTACCGGGCTTGAGGTCGGCCAGGCGCTGGAATTGGTCAATGACCATGATCCGCGTCCGCTTCAGATGCAATTCCAGA TCGAGCGTCCTGGCCAGTTTGCCTGGGACTACCTGGAACAAGGCCCCGCCACTTGGCGCGTGGCCATCAAGAAGGTTGCA TCGGCCGCCAAGGTTGGTCAGTGCTGCGGCGGTTGCGGCGGCGCCTGA
Upstream 100 bases:
>100_bases CTGGTCTGATCTGCATCAAGCGGCCTCGGATTGCGCTCACTACTATTGATGCAATTTAAATGCATCTTTACGGATGCCAT ACCCAGCCGAAAGGAATTCC
Downstream 100 bases:
>100_bases TTACGACGGCCGAACCGTTCCCACTCCCCATGTCAGGCGCCCGACCCGGCGCCTGTTTTCCTTTGTTCTGCCGAGTTCAT GATGTCTACGTCCGATCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSQSTSNPQLDLRTIPPRDRHPLIFSTFTGLEVGQALELVNDHDPRPLQMQFQIERPGQFAWDYLEQGPATWRVAIKKVA SAAKVGQCCGGCGGA
Sequences:
>Translated_95_residues MSQSTSNPQLDLRTIPPRDRHPLIFSTFTGLEVGQALELVNDHDPRPLQMQFQIERPGQFAWDYLEQGPATWRVAIKKVA SAAKVGQCCGGCGGA >Mature_94_residues SQSTSNPQLDLRTIPPRDRHPLIFSTFTGLEVGQALELVNDHDPRPLQMQFQIERPGQFAWDYLEQGPATWRVAIKKVAS AAKVGQCCGGCGGA
Specific function: Unknown
COG id: COG4309
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10437; Mature: 10306
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSTSNPQLDLRTIPPRDRHPLIFSTFTGLEVGQALELVNDHDPRPLQMQFQIERPGQF CCCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCH AWDYLEQGPATWRVAIKKVASAAKVGQCCGGCGGA HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SQSTSNPQLDLRTIPPRDRHPLIFSTFTGLEVGQALELVNDHDPRPLQMQFQIERPGQF CCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCH AWDYLEQGPATWRVAIKKVASAAKVGQCCGGCGGA HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA