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The map label for this gene is nosC

Identifier: 94313840

GI number: 94313840

Start: 1582159

End: 1582572

Strand: Direct

Name: nosC

Synonym: Rmet_4918

Alternate gene names: NA

Gene position: 1582159-1582572 (Clockwise)

Preceding gene: 291481547

Following gene: 94313841

Centisome position: 61.32

GC content: 67.39

Gene sequence:

>414_bases
ATGCGTATCAAGACCCTGTTGCTGACACTGATTTGCGGCGCTGCTCTGGCGGCCTGCGGACAAAAGGAAAGCGCCGCACC
TGCGCCGGCCGAGGCCACCGCGGCACCAGCACCGGCCGCTGCGCCCGCGGCTACTGCGGCCACCACCAGTGAACCCGAGA
ACGCGCTGGGCAAGCGCACGTATGGCTCGGTTTGCTCGATGTGCCACGCGGCAGGCGTGGCCGGCGCACCCAAGCCAGGC
GACAAGGCCGACTGGGGTCCGCGCATTGCCCAGGGCAACGACACGCTTTACAAGCACGCACTGGAAGGCTTCACCGGCAG
CAAGGGATCGATGCCCGCGCGCGGTGGCTCGACAACGCTGCAGGATGACGCCGTCAAGGCAGCGGTGGACTACATGACGG
CACAATCCCGCTGA

Upstream 100 bases:

>100_bases
AAAATAGGCATTTGCAATGCATGTTTGCAGGAGCAAAACATCCACAATGCGGAGCGTGTTGATTCACGAAGCTTTGATGC
CCCGCTAAAAGGAGAAAACG

Downstream 100 bases:

>100_bases
CGCCATGCACGCGCTCTCTCCTTCCGGCCTTGCCCGGCGGCGCTACCTGACGGCGGCACCGCTGCTTGCCCTCGGCATGT
TCGTCCTGCCGGCATTGGCC

Product: putative cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MRIKTLLLTLICGAALAACGQKESAAPAPAEATAAPAPAAAPAATAATTSEPENALGKRTYGSVCSMCHAAGVAGAPKPG
DKADWGPRIAQGNDTLYKHALEGFTGSKGSMPARGGSTTLQDDAVKAAVDYMTAQSR

Sequences:

>Translated_137_residues
MRIKTLLLTLICGAALAACGQKESAAPAPAEATAAPAPAAAPAATAATTSEPENALGKRTYGSVCSMCHAAGVAGAPKPG
DKADWGPRIAQGNDTLYKHALEGFTGSKGSMPARGGSTTLQDDAVKAAVDYMTAQSR
>Mature_137_residues
MRIKTLLLTLICGAALAACGQKESAAPAPAEATAAPAPAAAPAATAATTSEPENALGKRTYGSVCSMCHAAGVAGAPKPG
DKADWGPRIAQGNDTLYKHALEGFTGSKGSMPARGGSTTLQDDAVKAAVDYMTAQSR

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13644; Mature: 13644

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKTLLLTLICGAALAACGQKESAAPAPAEATAAPAPAAAPAATAATTSEPENALGKRT
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHH
YGSVCSMCHAAGVAGAPKPGDKADWGPRIAQGNDTLYKHALEGFTGSKGSMPARGGSTTL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
QDDAVKAAVDYMTAQSR
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIKTLLLTLICGAALAACGQKESAAPAPAEATAAPAPAAAPAATAATTSEPENALGKRT
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHH
YGSVCSMCHAAGVAGAPKPGDKADWGPRIAQGNDTLYKHALEGFTGSKGSMPARGGSTTL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
QDDAVKAAVDYMTAQSR
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]