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The map label for this gene is ybfB [H]

Identifier: 94313826

GI number: 94313826

Start: 1566917

End: 1568224

Strand: Direct

Name: ybfB [H]

Synonym: Rmet_4904

Alternate gene names: 94313826

Gene position: 1566917-1568224 (Clockwise)

Preceding gene: 94313825

Following gene: 94313828

Centisome position: 60.73

GC content: 66.28

Gene sequence:

>1308_bases
ATGTTTGCACAAGCCCTATCGAACCGGCTCGACCGGCGTGGAATCCACTATGCGTGGATCGTCGCGGCCATCACGTTCAG
CGTGATGCTCACTACCGCCGCCGCGCTCGGCCTGCCCGGCGCCTTTCTCAAGCCGCTGACCAGCGAGATGGGCTGGAGCA
CGGATCAGGTCTCGTCGATCCTAGCGGTGCGGTTTGCGCTGTTTGGTTTGATGGCGCCGTTCTCGGCGCTACTGATGGAT
CGCTTCGGCGTCCGCAACGTAGTCTGCGTGGCGCTGGCGTTGATCGCCGGGGCCATGGCACTGGCCACGGTATCGACGCA
GCTTTGGCATTTGTTCATCGCGTGGGGGCTGATGCTCGGTATCGGGTCGGGCATGACGGCGATGGTGCTTGCCGCGCTCG
TCGCCAACCGCTGGTTCACGGCGCGGCGCGGGCTGGTGATCGGCATGTTGACCGCAAGCTCCGCAACCGGCCAGCTTGCA
TTCCTGCCGGCGGCTGCCTGGCTGATCGAACACATGGGCTGGCGCTTTGCCGTGCTGCCGGTGCTGTTTGCCTGCGGCAC
GCTGGCGCTCCTCGTGTTCGCCTTCATGCGCAATCGCCCCGCCGACGTCGGCCTGGTGCCGTTCGGCGAATTGCCCGGCA
CGGCGCCCGCCACCACGGCACCGGCCATGCCGCTGACATGGCGCGGGCCGTTCGTGGTGTTGCGCGACGCGGCGCGCACA
CAAACGTTCTGGATCCTGGCCGGCACCTTCTTTATCTGCGGGCTGTCGACCAACGGCCTGATCCAGACGCACTTCATCGC
GCTATGCGCGGATTTCGGGATGTCGCCGGTACCTGCCGCATCGGCACTGGCCATGATGGGCGCGTTCGACTTCGTCGGGA
CGATCCTCTCGGGCTGGCTGTCGGACCGCTATGACAACCGCAAGCTGCTGTTCTGGTACTACGTGCTGCGCGGGCTGTCG
CTGTTCTGGCTGCCGCACTCGGAGTTCACGCTGTACGGCCTGTCGGTGTTCGCGATGTTCTATGGACTCGACTGGGTGGC
CACGGTGCCGCCGACGATCAAGCTTGCCGGCACCACGTTTGGGAGAGAGCGCGCTGCGATGGTATTCGGCTGGATCTTCG
CCGCGCATCAGATCGGCGCGGCAACGGCGGCATTCGGTGCGGGATTGTCGCGCACGGCCTGGCTGACCTACTCCCCGGCG
CTCTACGTGGCCGGTGCCGCATGTATCGTCGCCGGACTGCTCGCATTGATGGTACGGCGCCCGGCCCCTCGGGCAGATGG
CGTCACGCCGCAAGCGGCTGGCGCCTGA

Upstream 100 bases:

>100_bases
ACATCCTCGCCGCAGCCCGAGACCGCCTGCTGGCCAGCCACAAACCCACGGACGCCTGACCGCAGGCCGCACCCATTCTC
ATTGCCCCCAGGGGAGACCC

Downstream 100 bases:

>100_bases
ACGCTCCTGAGCGCGCCGGAAGGCAACACTAGCGTTCGTGGCAGGCCGCCACGAACGCGTCGATGAGCGCCGCCGCGCTG
GCACGCTTCAACGCCGATTG

Product: major facilitator superfamily transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MFAQALSNRLDRRGIHYAWIVAAITFSVMLTTAAALGLPGAFLKPLTSEMGWSTDQVSSILAVRFALFGLMAPFSALLMD
RFGVRNVVCVALALIAGAMALATVSTQLWHLFIAWGLMLGIGSGMTAMVLAALVANRWFTARRGLVIGMLTASSATGQLA
FLPAAAWLIEHMGWRFAVLPVLFACGTLALLVFAFMRNRPADVGLVPFGELPGTAPATTAPAMPLTWRGPFVVLRDAART
QTFWILAGTFFICGLSTNGLIQTHFIALCADFGMSPVPAASALAMMGAFDFVGTILSGWLSDRYDNRKLLFWYYVLRGLS
LFWLPHSEFTLYGLSVFAMFYGLDWVATVPPTIKLAGTTFGRERAAMVFGWIFAAHQIGAATAAFGAGLSRTAWLTYSPA
LYVAGAACIVAGLLALMVRRPAPRADGVTPQAAGA

Sequences:

>Translated_435_residues
MFAQALSNRLDRRGIHYAWIVAAITFSVMLTTAAALGLPGAFLKPLTSEMGWSTDQVSSILAVRFALFGLMAPFSALLMD
RFGVRNVVCVALALIAGAMALATVSTQLWHLFIAWGLMLGIGSGMTAMVLAALVANRWFTARRGLVIGMLTASSATGQLA
FLPAAAWLIEHMGWRFAVLPVLFACGTLALLVFAFMRNRPADVGLVPFGELPGTAPATTAPAMPLTWRGPFVVLRDAART
QTFWILAGTFFICGLSTNGLIQTHFIALCADFGMSPVPAASALAMMGAFDFVGTILSGWLSDRYDNRKLLFWYYVLRGLS
LFWLPHSEFTLYGLSVFAMFYGLDWVATVPPTIKLAGTTFGRERAAMVFGWIFAAHQIGAATAAFGAGLSRTAWLTYSPA
LYVAGAACIVAGLLALMVRRPAPRADGVTPQAAGA
>Mature_435_residues
MFAQALSNRLDRRGIHYAWIVAAITFSVMLTTAAALGLPGAFLKPLTSEMGWSTDQVSSILAVRFALFGLMAPFSALLMD
RFGVRNVVCVALALIAGAMALATVSTQLWHLFIAWGLMLGIGSGMTAMVLAALVANRWFTARRGLVIGMLTASSATGQLA
FLPAAAWLIEHMGWRFAVLPVLFACGTLALLVFAFMRNRPADVGLVPFGELPGTAPATTAPAMPLTWRGPFVVLRDAART
QTFWILAGTFFICGLSTNGLIQTHFIALCADFGMSPVPAASALAMMGAFDFVGTILSGWLSDRYDNRKLLFWYYVLRGLS
LFWLPHSEFTLYGLSVFAMFYGLDWVATVPPTIKLAGTTFGRERAAMVFGWIFAAHQIGAATAAFGAGLSRTAWLTYSPA
LYVAGAACIVAGLLALMVRRPAPRADGVTPQAAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=379, Percent_Identity=27.4406332453826, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI292781289, Length=161, Percent_Identity=27.3291925465839, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI40789261, Length=161, Percent_Identity=27.3291925465839, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46531; Mature: 46531

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAQALSNRLDRRGIHYAWIVAAITFSVMLTTAAALGLPGAFLKPLTSEMGWSTDQVSSI
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
LAVRFALFGLMAPFSALLMDRFGVRNVVCVALALIAGAMALATVSTQLWHLFIAWGLMLG
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSGMTAMVLAALVANRWFTARRGLVIGMLTASSATGQLAFLPAAAWLIEHMGWRFAVLP
CCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHH
VLFACGTLALLVFAFMRNRPADVGLVPFGELPGTAPATTAPAMPLTWRGPFVVLRDAART
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCEEEEECCCCH
QTFWILAGTFFICGLSTNGLIQTHFIALCADFGMSPVPAASALAMMGAFDFVGTILSGWL
HEEHEEEHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SDRYDNRKLLFWYYVLRGLSLFWLPHSEFTLYGLSVFAMFYGLDWVATVPPTIKLAGTTF
HCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCC
GRERAAMVFGWIFAAHQIGAATAAFGAGLSRTAWLTYSPALYVAGAACIVAGLLALMVRR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC
PAPRADGVTPQAAGA
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MFAQALSNRLDRRGIHYAWIVAAITFSVMLTTAAALGLPGAFLKPLTSEMGWSTDQVSSI
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
LAVRFALFGLMAPFSALLMDRFGVRNVVCVALALIAGAMALATVSTQLWHLFIAWGLMLG
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSGMTAMVLAALVANRWFTARRGLVIGMLTASSATGQLAFLPAAAWLIEHMGWRFAVLP
CCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHH
VLFACGTLALLVFAFMRNRPADVGLVPFGELPGTAPATTAPAMPLTWRGPFVVLRDAART
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCEEEEECCCCH
QTFWILAGTFFICGLSTNGLIQTHFIALCADFGMSPVPAASALAMMGAFDFVGTILSGWL
HEEHEEEHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SDRYDNRKLLFWYYVLRGLSLFWLPHSEFTLYGLSVFAMFYGLDWVATVPPTIKLAGTTF
HCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCC
GRERAAMVFGWIFAAHQIGAATAAFGAGLSRTAWLTYSPALYVAGAACIVAGLLALMVRR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC
PAPRADGVTPQAAGA
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]